| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,939,662 | C→T | M317I (ATG→ATA) | hsrA ← | putative transporter HsrA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,939,662 | 0 | C | T | 98.6% | 241.3 / NA | 70 | M317I (ATG→ATA) | hsrA | putative transporter HsrA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (31/38); minor base G (0/1); total (31/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
GCGTGACCGCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACC > NC_000913/3939418‑3939903 | ccGTGACCGCCAGAACTATCTTACCGCTGCTGGCATTGTTAACAGTGAAATCGGCAAGTGGGATGGTCTTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTATCGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGa < 2:380337/249‑1 (MQ=255) cGTGACCGCCAGAACACTGTTACCGCTGCTGGCCTTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGAtt > 2:84990/1‑251 (MQ=255) gTGACCGCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGAttt > 1:97051/1‑251 (MQ=255) aCCGCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGc < 1:93173/251‑1 (MQ=255) gCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCaat > 2:167592/1‑251 (MQ=255) gCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGAATTGGGTAACTATCGATTTTGCaa > 2:228577/1‑250 (MQ=255) gTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTa < 2:357929/251‑1 (MQ=255) ttACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAAACTa > 2:327024/1‑250 (MQ=255) tACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAAc > 2:184345/1‑251 (MQ=255) aCCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGGATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAAc < 2:211689/250‑1 (MQ=255) ggCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGAGCATTAGCCCAATAATCACCGTGATCCCCACTAACGTAGGGCGATAGCCCAGACGACGTAAGACTTGGGTGACGATCGATTTTGCAATAATGGAACCTAACGCTGTCGGt < 1:259356/250‑1 (MQ=255) ggCATCGTCATCGGTCAGACCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCAATCCCTACTATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGTGATAGCCCAGACGACGTCAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCgggg > 2:181119/1‑249 (MQ=255) gCATTGTCATCGGTCAGATCGGCAAGTGTTATGGTATTCAGCGCGGTAAACTGCGTCGACATAGCCAGCCCTAATAGAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCATAGAGAACTGAGGGATCTTTAGCCGAATAGTGGCCGTGAGCCCCATTAACGTATGGCGATAGCCTAGACGACGTAATTCTTGGGTAAGTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGc < 1:173483/251‑1 (MQ=255) cATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGcc < 1:69307/251‑1 (MQ=255) tGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGCCGACATAGCCATCCCTACTATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGAAACTATCGATTTTGCAATAATGGACCCTAACGCTGTCGGTGCcatc > 2:19993/1‑251 (MQ=255) gTCATCGGTCAGATCGGCAAGTGTTATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCAGCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAAGCACCGTGATCCCCACTAACGTATGGCGATAGCGCAGACGACGGAAGACGTGGGTAACTATCGAGGTGTCAATAATGGAAGCTAACGCGGTCTGTGCcatca < 2:401187/251‑1 (MQ=255) ctCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGAGAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATa > 2:92806/2‑250 (MQ=255) cGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAAt < 1:327819/250‑1 (MQ=255) cAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAAc < 1:112988/251‑1 (MQ=255) gATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGTCGATAGCCCAGACGACGTGAGACTTGGGTAACTAGCGAGTTTGCAATAATGGAATCTATCGCTTTCGGTGCCATCATACAGCCAGCAATAAACGCCTGAt < 1:196080/251‑1 (MQ=255) gATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCACTAATATAACCAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTgtt > 1:412121/1‑249 (MQ=255) aTCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACCACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCCTTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATcc > 2:202061/1‑251 (MQ=255) aCTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAAc > 2:145691/1‑251 (MQ=255) aCTGCGACGACATAGACATCCCCCATATAACCAAAGGCAAGCTCAAGATCCATATAGACATTGCTGGAGATAGTAAAGAGAACTGAGGGATCATTAGTTCAATAATCACCGTGCTACCACCTACCGTATGGCGCTAGCCCAGACGTCGTCAGACTTGGGTAACTATCGATTTTGCACTAATGGAACCTAACGCTGACGGTGCCATCATACAGCCAGCAATAAACGCCTGCTAACCACATCATACCTGTAAc > 2:383555/1‑251 (MQ=255) cTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGtcac > 2:118608/1‑247 (MQ=255) ataAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTacac > 1:352605/1‑250 (MQ=255) taAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGt < 1:347805/221‑1 (MQ=255) taAACAACGGCAAGATCAGCATCCATATAGCCATTGATGGTGATTGCAACGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGt > 2:347805/1‑221 (MQ=255) aacaacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGcc > 2:171454/1‑251 (MQ=255) aacGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGt < 1:352502/251‑1 (MQ=255) ggCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCTATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTc > 2:114832/1‑162 (MQ=255) ggCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCTATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTc < 1:114832/162‑1 (MQ=255) cAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCa < 1:66084/251‑1 (MQ=255) aaGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTcccc > 1:83501/1‑249 (MQ=255) gATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGAc < 1:19993/251‑1 (MQ=255) aGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCAACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGt > 2:302079/1‑251 (MQ=255) gCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAAGCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATACCCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGtt < 2:306884/251‑1 (MQ=255) tCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGc > 2:315669/1‑250 (MQ=255) ataGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATAtt > 1:128865/1‑251 (MQ=255) aTTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATGCAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCAGAATGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTAc < 1:397426/251‑1 (MQ=255) ggTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATAc < 1:228577/250‑1 (MQ=255) ggTGATTGAAAAGAGAACTGAGAGATCATTAGCCCAATAAACACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTGGGGTAACTATCGAGTTTGCAATAATGGAACCTAACGCTGTCGGGGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTGGCAATATTGCCTACGATAcc < 2:3201/251‑1 (MQ=255) gTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCCCTAACGTATGGCGACAGCCCAGACGAAGTAAGCCTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGATGTCGGAGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCg > 1:202855/1‑251 (MQ=255) aTTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATc < 1:21921/251‑1 (MQ=255) aTTGCAAAAAGACATGAGCGATCATTAGCCCAATAATCACCGTTCTCCCCACTAACGTATGGCTATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATTGAACCTACCGCTGTCGGTGCCACCATACAGCCAGCAATAAACGCCTGTTAACCAAATCCTACCGGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGTCGTGTGGCAATATTGCCTACGATACCGATc < 2:163957/251‑1 (MQ=255) tGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCg < 1:145691/250‑1 (MQ=255) gAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTTATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGTCGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCggg < 1:34052/249‑1 (MQ=255) gAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGt < 1:171454/250‑1 (MQ=255) gATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGCGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTtaa < 1:84990/251‑1 (MQ=255) tAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTaaataaat > 1:132176/1‑251 (MQ=255) aGCCCAATAATCCCCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGCCGTAAGACTTGGGTATCTATCGATTTTGCAATAATGGAACCTAACGCTGTCTGTGCCACTATACAGCCAGCAATAAACGCCTGAAATCCAGATCCTACCGTTATCATCAATGGCATAAGGAACTGTCCACAGCCGGTCCCCAGGCGTGTTTCAATAGTGCCTACGAGACCGATCTAGAAAGTGCGGGCGTTAAATAAATc < 2:261113/251‑1 (MQ=255) aatCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGAGAGGGTTTTAAATAAATCTAATGaa > 2:140480/1‑250 (MQ=255) aCCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTa > 1:361410/1‑250 (MQ=255) cGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATg < 1:302079/251‑1 (MQ=255) gTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCGAATGAAATTAATgg < 1:126622/251‑1 (MQ=255) gTGATCCACACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATACTGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGTGGGTTTTAAATAAATCTAATGAAATTAATgg > 1:63871/1‑251 (MQ=255) ccccACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGTTCCCCAGACGGGTTGCAATATGGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTg < 1:202061/251‑1 (MQ=255) taaggCGATAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAAGAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCGGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAAGTAATGGGTTTGGCGTGcgtcg < 2:391953/247‑1 (MQ=255) aTGGCGATAGCCCCGACGACTTAAGACTTGGGTAACTATCGATTTTGCAATAATGAAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGTGTTTGGCGTGcgtcgt < 2:426455/250‑1 (MQ=255) gATAGCCTAGACGACGTAAGACCTGGGAAACTATCGATTTTGCAATAATGGTACCTAAAGATGTGGGTGCCATCATACACCCAGCAATAAACGCCTGATAACCCAATCCTACCTGTAACATCAATGGCATAAGGCACGGCACAAAGCCGGTCCCCAGACCGGTAGCAATATAGCCTACGCTACCGAACGAGAAAGCGGGCGATTTAAATAAATCTCATGAAATTAATGGGTTTGGCGAGCGTCGTGCATgg > 2:77741/1‑251 (MQ=255) aTAGCCCAGACGACGTAAGACTTGGGTAACTATCGATTTTGCACTAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATggg > 1:366155/1‑250 (MQ=255) cAGACGACGTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAatat < 1:327024/251‑1 (MQ=255) gacgTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATag > 2:71466/1‑248 (MQ=255) gacgTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAgaga < 2:83501/251‑1 (MQ=255) acgTAAGACTTGGGTAACTATCGATTTTGCAATAATGGAACCAAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTAATAACCGAATACTACCTGTACCATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTACCTACGCTACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGCGAATATAgaga > 1:171916/1‑250 (MQ=255) ggTAAGACTTGGGTAACTATCGATGTTACAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAg < 1:63107/250‑1 (MQ=255) aaGAGTTGGGTAACTATCTATTTTGCAATAATGGAACCTAACGCTGGCGGTGGCATCATATAGCCAGCAATAAGCGCCGGTTAACCAAATCCTACCTGTAACATCGATGTCATAAGGGCCGGTACACAGGCGGTTCCCGGACGGGGGGCAATGTTGGCTACGATATCGATCGAGAAGGTGCGGGTTGTTAATAAATCTTATGGAGTTATTTGATTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCa < 1:257338/250‑1 (MQ=255) gccTTGGGTAACTTTCCACTTTGCAATAATGGCACCTAACGCTGTTGGTGCCCTCATACAGCCAGCAACAACCCCCTGATATCCAACTCCTCCCTGTACCACCAATGGCATAAGTCCCGGTACACAGCCGGTTCCCAGACGGGTTGCAATACTGCCTACTATACCGATCCAGAAAGTGCGGTTTTCAAATAAACCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTa < 1:41535/249‑1 (MQ=255) tGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCTTGCATGGAGAATATAGAGAAGCAGTAAcc < 1:118608/250‑1 (MQ=255) tGGGTAACTATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAAc < 1:184345/249‑1 (MQ=255) | GCGTGACCGCCAGAACACTGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGTATGGCGATAGCCCAGACGACGTAAGACTTGGGTAACCATCGATTTTGCAATAATGGAACCTAACGCTGTCGGTGCCATCATACAGCCAGCAATAAACGCCTGATAACCAAATCCTACCTGTAACATCAATGGCATAAGGAACGGTACACAGCCGGTCCCCAGACGGGTTGCAATATTGCCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACC > NC_000913/3939418‑3939903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |