Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,725,582 C→A C44F (TGC→TTC)  ysaB ← putative lipoprotein YsaB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,725,5820CA97.9% 154.9 / NA 48C44F (TGC→TTC) ysaBputative lipoprotein YsaB
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base A (28/18);  total (29/19)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTGTGGATTTAAAGGAAGGGATCAGTATACCCGCTGGATGGAAGATATACAGTACGAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGCATAACGCTTCCATATTCAACGAACGCAGAGGATCAACCTTTACCCGTTGTGCTTTCTGCACGGGTGACGGTATAGAACAACCCACTAGCACCATAAGCGCCATTGCCGGAAAGAAAGCGTTCATCATCATTAAATTACCGTCTGGTTTGCAGGTGAGTCTTATTATTTATATCGGTATAGTGGCTGATATCTTACGAATTTCCTTAAGCCTCTATAAGCTGTAGTGATAAAACTCAGATT  >  NC_000913/3725337‑3725822
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                
cGTGTGGATTTAAAGGAAGGGATCAGTATACCCGCTGGATGGAAGAAATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAGCTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAAc                                                                                                                                                                                                                                             <  2:77417/251‑1 (MQ=255)
           aaaGGCAGGGATCAGTATCCAAGCTGGATGGAAGATATACAGTACAACAAGGGAACACGCAGGGCCTAACGCCTGGAAAGATGATAAAAATGGACATCCGAGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATACCCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAACGCGGAGACGTCGATTTCTTGATCGCCGGTGTTATAAAGTTTTGCAGCATGATCCTTGCCTaaagcaccggcctc                                                                                                                                                                                                                                  >  2:253903/1‑239 (MQ=255)
           aaaGGAAGGGATCAGTATACCCGCTGGATGGAAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGGCTGATCCTTGGATAACGCagcggcctc                                                                                                                                                                                                                                  <  1:141881‑M1/251‑10 (MQ=255)
               gaaggCATCAGTATACCCGCTGGATGGAAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCAATCCGCGTCACAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggat                                                                                                                                                                                                                              >  2:395619‑M1/1‑238 (MQ=255)
                           ataCCCGGTGGATGGAAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatca                                                                                                                                                                                                                  <  2:147459‑M1/251‑26 (MQ=255)
                           ataCCCGCTGGATGGAAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatc                                                                                                                                                                                                                   <  1:396914‑M1/250‑25 (MQ=255)
                                 gCTGGATGGAAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttt                                                                                                                                                                                                            >  2:330002‑M1/1‑220 (MQ=255)
                                        ggaAGATATACAGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttg                                                                                                                                                                                                      <  2:142024‑M1/250‑38 (MQ=255)
                                                   aGTACAAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagcc                                                                                                                                                                                           >  1:230699‑M1/1‑202 (MQ=255)
                                                         aaaCGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaaggg                                                                                                                                                                                    <  2:224343‑M1/251‑56 (MQ=255)
                                                           aCGGGCAAACGCTGGGCTTAAAGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTAAGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGCAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCATGATCCTTGATTAACGCatcggcctcggattcacgtttatcagagttggttttgggcttgcagccagaaggg                                                                                                                                                                                    >  2:129772‑M1/1‑194 (MQ=255)
                                                             gggAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGACATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtc                                                                                                                                                                                >  1:159624‑M1/1‑192 (MQ=255)
                                                                              aaCGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCAAAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagacaggctgatattttgac                                                                                                                                                                >  2:365199‑M1/1‑175 (MQ=255)
                                                                                             gCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgc                                                                                                                                                >  1:178642‑M1/1‑160 (MQ=255)
                                                                                                         cATCCGCGTCAAAAGAACAGACAAACGGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGGCGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccat                                                                                                                                    <  2:230699‑M1/251‑104 (MQ=255)
                                                                                                                           aGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataattt                                                                                                                  >  1:247‑M1/1‑130 (MQ=255)
                                                                                                                              cAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataattttt                                                                                                                >  1:260142‑M1/1‑127 (MQ=255)
                                                                                                                                aaCTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagactaatttttagg                                                                                                             >  2:67521‑M1/1‑125 (MQ=255)
                                                                                                                                             ggAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggcgggcagccagaagggagtcatgctgatattttgacaataatccgggttcgcgattctcgcgataacaccaaagaataatttttagaggtgatgagttgc                                                                                                <  1:391554‑M1/251‑140 (MQ=255)
                                                                                                                                               aaGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgctt                                                                                              >  1:271103‑M1/1‑110 (MQ=255)
                                                                                                                                                  ggataacCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTTACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGAGCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataagccgggttcgcgattctcgccataacaccaaagaataatttttagagttgatgagttgcttagt                                                                                           <  1:324010‑M1/249‑145 (MQ=255)
                                                                                                                                                    ataACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagtt                                                                                          <  1:359567‑M1/250‑146 (MQ=255)
                                                                                                                                                      aaCCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttac                                                                                        >  1:22838‑M1/1‑103 (MQ=255)
                                                                                                                                                        ccGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacat                                                                                      >  2:315259‑M1/1‑101 (MQ=255)
                                                                                                                                                          gcgcATTTCCTAGCTTCCCTGGAACTGTTCGAAGGAGGTGACGTCGATTTTTTGATCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagacagaagggagtcaggctgatattttgccaataatctgggttcgcgtttctcgccataacaccaaagaataatttttcgaggtgatgagttgcttagttacataac                                                                                   >  2:139419‑M1/1‑99 (MQ=255)
                                                                                                                                                              aTTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggca                                                                                                                                                                                              <  2:344127‑M1/140‑46 (MQ=255)
                                                                                                                                                              aTTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggca                                                                                                                                                                                              >  1:344127‑M1/1‑95 (MQ=255)
                                                                                                                                                               tttCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattg                                                                              >  1:381903‑M1/1‑94 (MQ=255)
                                                                                                                                                                 tCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgt                                                                             >  2:123431‑M1/1‑92 (MQ=255)
                                                                                                                                                                 tCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTAGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgt                                                                             >  2:346566‑M1/1‑92 (MQ=255)
                                                                                                                                                                     aGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgac                                                                        >  1:189858‑M1/1‑88 (MQ=255)
                                                                                                                                                                                  cTGTTCGAAGGAGGTGAAGTCGTTTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtctggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgcaggcataacat                                                           >  2:287184‑M1/1‑75 (MQ=255)
                                                                                                                                                                                           ggCGGTGACGCCGATTTTTTGCTCGCCGGTGTTATAACGTTTTCCCTCCTGAGCCTTGAATAACGCatcggcctcggattctcgtttatcagtgttgtttttgggcgggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcgtagttacataacgattgtatgacgaagtcataacatgctgtagat                                                  <  2:251144‑M1/251‑186 (MQ=255)
                                                                                                                                                                                                   cGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatc                                            >  1:108884‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                             ttGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCagcggcctcggattcacgtttatcagtgttgttttggggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgcc                                 <  2:108884‑M1/250‑203 (MQ=255)
                                                                                                                                                                                                                     cGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataattt                                                                                                                  >  2:321457‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                     cGGTGTTATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggaggcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaagaattt                                                                                                                  <  1:321457‑M1/161‑122 (MQ=255)
                                                                                                                                                                                                                          ttATACCGTTTTGACGACTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaa                        >  2:405431‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                          ttATAACGTTTTGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaa                        <  1:405431‑M1/246‑212 (MQ=255)
                                                                                                                                                                                                                            ataACGTTTTGCCGCCTGATCCTTGAATCACGCatcggcctcggattcaagtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacctaacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaatatcttg                 >  2:347652‑M1/1‑33 (MQ=255)
                                                                                                                                                                                                                             aaacGTTTTGCCGCCTGATCCTTGAATAACGCatcggccgcggattcacgtttatcagtggtgtttttgggctggcagccagaagggaggcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataagtgttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagagcacatcaggtgaacgccgtaagaaaatatcttgt                <  2:189858‑M1/250‑220 (MQ=255)
                                                                                                                                                                                                                                   tttGCCGCCTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgactataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaataaaatatcttgtgattc           <  1:359046‑M1/250‑225 (MQ=255)
                                                                                                                                                                                                                                      gccgccTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaatatcttgtgattcagat       <  2:22838‑M1/251‑229 (MQ=255)
                                                                                                                                                                                                                                      gccgccTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaatatcttgtgattc           >  2:320288‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                      gccgccTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataagccgggttcgcgattctcgccataacaccaaagaataagttttagaggtgatgagttgcttagttacataacgattgtatgacgaatgcataacatgcggtagatcacatcaggtgaacgccgtaagaaaatatcttgtgattcaga        <  1:395619‑M1/250‑228 (MQ=255)
                                                                                                                                                                                                                                         gccTGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagaaaatatcttgtgattcagatcac    >  2:214916‑M1/1‑20 (MQ=255)
                                                                                                                                                                                                                                            tGATCCTTGAATAACGCatcggcctcggattcacgtttatcagtgttgtttttgggctggcagccagaagggagtcaggctgatattttgacaataatccgggttcgcgattctcgccataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtaagacaatatcttgtgattcagatcacaa  >  1:416452‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                              aTCCTTGAATAACGCatcggcctaggattcacgtttctcagtgttgtttttgggctggccgccagcagggagtcaggctgctattttgacaataatccgggttcgcgcttctcgcaataacaccaaagaataatttttagaggtgatgagttgcttagttacataacgattgtatgacgaaggcataacatgctgtagatcacatcaggtgaacgccgtacgaaaatatcttgtgattcagatcacaa  >  2:218224‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                
CGTGTGGATTTAAAGGAAGGGATCAGTATACCCGCTGGATGGAAGATATACAGTACGAAACGGGAAAAAGCAGGGCTTAACGCATGGAAAGATGCAAAAAATGGCCATCCGCGTCAAAAGAACAGACAAACTGCTCTTTACGGAAGGTATAACCGCGCATTTCATAGCTTCCCTGGAACTGTTCGAAGGCGGTGACGTCGATTTTTTGCTCGCCGGTGTTATAACGTTTTGCCGCCTGATCCTTGCATAACGCTTCCATATTCAACGAACGCAGAGGATCAACCTTTACCCGTTGTGCTTTCTGCACGGGTGACGGTATAGAACAACCCACTAGCACCATAAGCGCCATTGCCGGAAAGAAAGCGTTCATCATCATTAAATTACCGTCTGGTTTGCAGGTGAGTCTTATTATTTATATCGGTATAGTGGCTGATATCTTACGAATTTCCTTAAGCCTCTATAAGCTGTAGTGATAAAACTCAGATT  >  NC_000913/3725337‑3725822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: