| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,297,193 | G→A | L316L (CTG→TTG) | yraQ ← | permease family protein YraQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,297,193 | 0 | G | A | 94.8% | 171.6 / NA | 58 | L316L (CTG→TTG) | yraQ | permease family protein YraQ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (27/28); minor base C (3/0); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAGCATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGT > NC_000913/3296950‑3297435 | aGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGAGGCTTGCCGCGTATTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCACCATaagc > 2:80319/1‑249 (MQ=255) gggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCAGGAACGCTTTG‑CGCAACATAATCAGt > 2:156789/1‑251 (MQ=255) aaCTACGGCGTTTACGTTTATTAAAGAGCAGCCCCGTGTAATGCCGGAGGCGACGCTTGCCGCGTCTTATCAGGCCTACATCGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTGCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGTCTTGCGCCGGGATCGCTTTG‑CACAACAGAATCAGTGACg < 2:174851/251‑1 (MQ=255) aCGGCGTTTTCGTTTATTAAATAGCAGCCCCTTGAAATGCCTGGTGCGACGCTGGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAAGCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTGTCGGCGGGAACGCTTTG‑CTCAACATAATCAGTGACGGc < 2:71258/249‑1 (MQ=255) cGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCaa > 1:269048/1‑250 (MQ=255) ttacgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGAGAAGGCGTTTACGCCGCATCCGACAGGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCAc < 1:385707/250‑1 (MQ=255) tttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCgg > 1:187513/1‑251 (MQ=255) tattaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGACCAATAGCGCCAGCCCGCCGACAAGCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTGCGCCGGGATCGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCggg < 1:417842/250‑1 (MQ=255) attaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCggg > 1:308309/1‑249 (MQ=255) aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGtc > 1:269449/1‑251 (MQ=255) agcCCCTTGTAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCTTAGGTCAGATAAGGCGTTTACGCCGCATCCGACTTTT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCGCACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCTACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATcaac < 1:225394/251‑1 (MQ=255) gTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGCACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCCACAATGcc > 2:293739/1‑249 (MQ=255) agtgcaggaagcgccGCTTCCCGCGTCTTTTCATGCCTACGACGATACAAACCGGTGGCAATATAGGTAGTTTACCCCGCATCCAACA‑GTGTTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCTCCCGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCTCTGCCGGAAGCGTCATCAACAATGCCAgc < 2:150213/236‑1 (MQ=255) aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAgc < 1:6860/250‑1 (MQ=255) gATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCCACAATGCCAGCGCCGGAGc > 2:258971/1‑251 (MQ=255) cGCTTCCCGCTTCTTATCAGGCCGAAAACGATACAACCCGTAGGTCAGATAAGGCTTTTACGCCGCTCCCTACATTT‑TTTCCCACAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAATCTCACTGCCGGTAGCGTCATCAACAATGCCATCGCCGGAGCGGTTccc < 2:277639/251‑1 (MQ=255) tGCCGCGTCTTATCAGTCCTACAAGGATACAAACCGTAGGTCAGATAAGTCGTTTACGCCTCATCCGACATGT‑TTTCCCTCAAATCAGACCATCAGCGCCATCCCTCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCAGAAGGCTTTCGCCGGTAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGGGCGGTTCCCAt < 1:272192/249‑1 (MQ=255) cgcgTCTTATCTGGCCTCAAACGATACAACCCGTAGGTCAGCAAAGGCGTTTACGCCGAATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGACGACAATCACCCCAGACACTGACACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCACACTCACTGCCGGGAGCGTCATCAACACTGCCAGCGCCGGAGCGGTTCACATACCTg > 2:283622/1‑251 (MQ=255) ttATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGCGCGTCATCAACAATGCCAGCGACGGAGCGGTTCCCCTACCTGCCAGc > 2:38263/1‑250 (MQ=255) cAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGcatcat > 2:166232/1‑251 (MQ=255) ccTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGtt < 1:217721/251‑1 (MQ=255) caaaaaCGATAAAAACCGTAGGTCAGATAAGGCGGTTACGCCGCATCCGACAGGT‑TTTCCCTCAAATCAAAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGttt < 1:226743/247‑1 (MQ=255) aCAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGt > 1:115081/1‑251 (MQ=255) atacaaaccgaagtacagtaaaGGCGGTTACGCGGCACCCGCCATGT‑TTTCCCGAAAACCAAAACAACAGCCCCAGCCCGCCGACAATCACCCCAGACACTGCCACCATCGCCCCTGTAAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATc < 2:215335/231‑1 (MQ=255) aTACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATc < 1:138072/251‑1 (MQ=255) aCAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCgg > 1:335050/1‑251 (MQ=255) gtaagaaaagcgttttccgccgcATCCGAAATGT‑TTCCCCGAAAATCAGACAAACAGCCCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTctgctg < 2:145334/234‑1 (MQ=255) cAGATAAGGCGTTTCCGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCtgctgc < 1:61520/250‑1 (MQ=255) aaTAAGGCGTTTCCGCCGCAGCCGACATGT‑TTCCCCCAAAATCAGAACAACAGCCCCCGCCCGCCAACAATCACACCAGACACTCCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGt < 2:131249/250‑1 (MQ=255) gTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGCACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATg > 2:8260/1‑250 (MQ=255) ttACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCACCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGac < 1:318781/250‑1 (MQ=255) aCGCCGCACCCGACATGT‑TTCCCCTCAAATCAGAACACCAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCAGCGCCCCTGTCAGCCATAAGGCTTGCGCCGGGAACGCTTTG‑CGCAACATAATCAGTTACGTCAAACGCACTGCCTGGAGCGTCATCAACAATGCCAGGTCCGTAGCTGTTCCCATACCTGGCAGCTTCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGacaa < 1:198556/250‑1 (MQ=255) gcATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCCCACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAACCAAGc > 2:383125/1‑251 (MQ=255) aTCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCACACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCACCATAATCAGTGACGGCAAACTCACTGCCGTGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTCCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCac > 1:77726/1‑250 (MQ=255) gACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACCTAATCAGTGACGGCATACTCACTGCCGGGAGCGTCATCACAAATGCCAGCGCCGGAGCGGTGCCCATACCTGCCCGCCTCATCGTTTGTACAATCGGAATCTCTGCTGCCGTGGGAATGACAAACACGCTTCCTg > 2:18189/1‑251 (MQ=255) t‑tttCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCg > 1:169320/1‑251 (MQ=255) t‑tttCCCTAAAATCAAAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCGCCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAACCTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAAGCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTAcc < 1:8260/250‑1 (MQ=255) tttacccccAAACCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTGCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTAcc < 2:308309/242‑1 (MQ=255) aaaTCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCACAAGGATTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCCTCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGACTGACACACAAGCATCCTGCTCCCCCCATctccc > 1:176869/1‑247 (MQ=255) aaaTCAGAAAAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACGCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGcca < 1:278670/251‑1 (MQ=255) aaTCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGccac > 1:263494/1‑251 (MQ=255) cAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCAACATCGCACCTGTCAACCATAAGACTTTCGCGGGGACCGCTTTC‑CGAACCATAATAAGTGACGACAACATCACTGCCGGATGTCTCATCAACAATACCAGCGCCGGAGCGGTTCCCATAACTCCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTACCGTGGGAATGACAACCAAGCCTCCTGCTACCGCCATCGccacctc > 1:205169/1‑249 (MQ=255) acaacaGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCTCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGACATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATAGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCAccacccac > 1:296687/1‑251 (MQ=255) acaGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATc > 1:246102/1‑251 (MQ=255) cgcgcCCGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCGGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGGGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTGTGTACAATCGGAATTTCTGCTGCCGTGGGAAGGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAg < 1:249842/250‑1 (MQ=255) aGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCAGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAg < 1:156789/251‑1 (MQ=255) ccccAGCCCGCCGACAATCACCCCAGACACTGCCGCCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCAGCATCGTTTGTACAATCGGAAGTTCTTCTGCCGTGGGAGTGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGc < 1:406258/249‑1 (MQ=255) gACACTCCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCAATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCAACAGCACCATCGGCATg < 2:328328/251‑1 (MQ=255) tGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATggggg > 1:256249/1‑250 (MQ=255) cgccatcctccaccttttCAGCCTTAAGGCTTGCTCCGGGAACG‑TTTGTCACAACATAATCATTGACGTAAAACGCCCGGCCGGCAGCCACATCAACAAGCCCAGCTCCGGTGCGGTTCCCATCCCGGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGATACCGCCATGGCCACCACCCACATCAGGCTGTTAGCGACAGCACCATTGGCATGGGGGa < 2:414553/234‑1 (MQ=255) aTCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGAACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGAATGGGGGAATGAccc > 2:215811/1‑250 (MQ=255) gCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGAc > 1:80797/1‑251 (MQ=255) ccccTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGAcg > 2:294049/1‑251 (MQ=255) gTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGc > 1:47269/1‑251 (MQ=255) aGCCATAAGGCTTTGGCCGGGAACGCTTTG‑CGCAACATCATCAGTGACGGCCAACTCACTGCCGGGAGCGTCATAAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACCAACAAGCATCCTGCTACCTCCATCGCCAACACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGAGGc > 2:161926/1‑251 (MQ=255) ggCTTTCGCCGGGAACGCTTTG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCACACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAaca < 1:258971/251‑1 (MQ=255) tttG‑CGCAACATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGCATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCCGTACTGCCAGGATGt > 2:126133/1‑251 (MQ=255) tgg‑cgcAACAAAATCAGCGACGGCAATCCCCCTGCCGGGGCCGTAATCACCAATGCCAGCGCCGGGGCGGTCCCCATACCTGCCAGCATCATCGTGTGTACAATCGGAATTTCTGCTGCCGGGGGAATGACAAACAAGCATCCGGCTACCGCCATCGCCGCCACCCACAGCAGGCTGGTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACGCCATTACTGCAAGGATGt < 2:269449/248‑1 (MQ=255) | AGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGT‑TTTCCCTCAAATCAGAACAACAGCGCCAGCCCGCCGACAATCACACCAGACACTGCCACCATCGCCCCTGTCAGCCATAAGGCTTTCGCCGGGAACGCTTTG‑CGCAGCATAATCAGTGACGGCAAACTCACTGCCGGGAGCGTCATCAACAATGCCAGCGCCGGAGCGGTTCCCATACCTGCCAGCATCATCGTTTGTACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGT > NC_000913/3296950‑3297435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |