| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,914,523 | 0 | C | T | 23.5% | 122.0 / 11.2 | 68 | V226V (GTG→GTA) | glmU | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (14/38); new base T (16/0); total (30/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.90e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGG > NC_000913/3914274‑3914772 | gATTTCGCAATCATCGCCACTCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑GTATTcc > 1:95325/1‑250 (MQ=255) aTTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTcc > 1:130090/1‑249 (MQ=255) atcatcGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTa < 1:107330/251‑1 (MQ=255) atcGCCAATCACGCTGTTTTTAATCACGCCACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑tt < 2:347044/251‑1 (MQ=255) atcGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTAACGCGATGACCGAGAGTCACGTTGCCCTCGATGATACCGTTAGACTCAATTTCAACATCGCGCCCGCGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGCTAAACACGCTCCAGACGGGAGCGTTGCAGGCGG‑TTATTC‑AC‑CCCTTCTAC‑tt > 1:403266/1‑251 (MQ=255) gCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCCATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTTTTT‑AC‑GCCTTcctccttgc > 1:265122/1‑243 (MQ=255) gCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑GTATTT‑AA‑GCcttcttc‑tttgc > 1:238293/1‑248 (MQ=255) cACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTTGAGCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCGTCTAC‑TTCGCTTAAAc < 2:361538/251‑1 (MQ=255) aCGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AA‑GCCTTCTAC‑TTCGCTTTAACg > 1:98914/1‑251 (MQ=255) cGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑TC‑GCCTTCTAC‑TTCGCTTAAACGt > 1:326917/1‑251 (MQ=255) tttAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCAAGTTGCCCTCGATGATAACGTTAGTATCCATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGCTCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCCCTTAAACGTTGccg > 1:378264/1‑247 (MQ=255) tAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGGTTTTTC‑‑C‑CCCTTCTTC‑TTTCCTTAAACGTTggcggtgg > 2:272643/1‑244 (MQ=255) gCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGACCTCGATGATAACGCTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑ACCGCCTT‑TAC‑TTcccccaaaacttgaggaagaacgggg > 1:50374/1‑225 (MQ=255) aaCCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑CC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGcgccg > 1:327699/1‑248 (MQ=255) aTTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATCATAACGTTAGTCTCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCCTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTTTTCCAC‑‑CCTTCTACCTTC‑CTTAAACGGTGCGGGTG‑AACGGGGGCGATTTTACGccc > 1:291595/1‑251 (MQ=255) cACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCCTCTAC‑TTAGCTTAAAAGTTGCGGATG‑AAAGGCGACGAATTTACGCCCtttcc > 1:235506/1‑248 (MQ=255) gATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACTCTCCAGACGGGAGAGTTGCAGGCTG‑TTATTC‑AC‑TCCTTCTAC‑TTCGCTTAATCGTGGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATAc < 1:269331/251‑1 (MQ=255) gagaGTGACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGCGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACCCGCTCCAGACGGGAGAGTTGCAGGCGG‑ATATTT‑AA‑GCCCTCTAC‑TTCTCTTTAACGTTGTGGGTG‑GACGGCGGCGATTTCaacgccttctctatttgccagcg > 2:328257/1‑229 (MQ=255) agagTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAgcgc < 1:73321/251‑1 (MQ=255) gagTCTCGTTGCCCTCGATGATAACGTTAGTCTCAATTTCAACATCGCTCCCGTGAGTTAGCGTACCACGCAGATCAAAGCGCGCTGTATCGCGCAGCATAACGCCTGCAAACAGCAGGTTTTCAGCCGTTTCGGACTGATAAACACGCTCTAGCCTGGAGAGTTGCAGGCGT‑TTATTC‑TC‑GCCTTCTAC‑TTCCCTTAATCGTTGCGGAAG‑AACGTCCACGATTTCACGCCCACCCTGAAATGCCAGCGCa < 2:292076/251‑1 (MQ=255) gCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTTAAAGGTGCGGATG‑CACGGCGACGATTTTACGCCCCTCCTGATACGCCAGCGCCATAATGTCgg > 1:259277/1‑251 (MQ=255) ccTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCTAGCGCAATAATGTCGGTg < 2:87697/251‑1 (MQ=255) cGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCCTCTAC‑TTCTCTTTAAAGGTGCGGGTG‑AACGGGGACGATTTCACGCCCTTCCTGATATGCCCGCGCCATTATGTCgggggtg > 2:290528/1‑246 (MQ=255) cGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACTCCAGCGCAAGAATGTCGGTGa < 1:336371/249‑1 (MQ=255) tgatAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCCTCTAC‑TTCGCTTAAAAGTTTCGGGTG‑AAAGGCGAAGATTTTACGCCCTTCCTGGAAAGCCCGCGCAAAAATGTCGGTGATgg > 1:238335/1‑248 (MQ=255) tAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCCCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑TCCTCTTAT‑TTTGCTTAAACGGTGCGGGTG‑AACGGCCAGGATTTCACGCCCTTCCTTATAGCCCATCGCCATAATGTCGGTgctgccttat > 1:231625/1‑242 (MQ=255) aaCGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑CCCTTCTCA‑TTCGCTTAAAAGTTGGGGATG‑AAAGGCCAGGATTTTCCGACCCTCCTGTGACGCCAGGGCaataattttgggggtgtaggatt > 1:253861/1‑234 (MQ=255) aaCGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGGACCACGCAGAGCAAAACGCGCTGGATCGCGCAGCATAACGCTTGCTAACAGCAGTTTTTCAGCCTGTTCTGACTGATAAACACGCTCCAGACGGGAGAGTGGCAGGCGG‑TTATTC‑AC‑GCCTTATAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCTTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTAtt < 2:164997/251‑1 (MQ=255) aCGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGGACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTc < 2:238888/251‑1 (MQ=255) gTATCAATTTCAACAACGCGCCCGTGAGTTAGCTTACCACGCAGATCAAAAAGCGCTGGATCGCGCAGCATAACGCCTTCTAACAGCAGTTTTTCAGCCCGTGCGGACTGATGAACACGCACCAGACGGGATAGTTGCAGGCGG‑TTATGC‑GC‑GCCTTCTAC‑TTCGGTTAAACGTTGCGGATG‑AACGGCGACGATTGCTCGTCCTTCCAGAGACGCCAGCGCAATAATGTCGGGGATGTAGTATTCGctccg < 2:343784/251‑5 (MQ=255) aaTTTCAACATCGCGCCCGTGAGTTAGCGTACCTCGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACGGATAAACACGCTCCAGACGGGAGAGGTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TGCGCGTAAACGTTGCGGAGG‑AACGGCGACGATGTCACGCCCTGCCTGATACGCCAGCGCAATAAAGTCGGCGATGTAGGATTCGCCC‑TGAGCat < 2:177853/251‑1 (MQ=255) aTTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCatt < 1:53588/251‑1 (MQ=255) aTTTCAACATCGCGCCCGTGACTGAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCTCTTAAACGTTGCGGATG‑AACGGCGACGAGTTCACGCCCTGCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCatt < 2:244130/251‑1 (MQ=255) aTTTCAACAGCGCGCCCGTGAGTTAGCGTACCACGCAGAGCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGAGAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCatt < 2:327471/251‑1 (MQ=255) cAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAACACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑CCCTTCTAA‑TTCGCTTTAACGTTGCCGATG‑AACCGCGACGGTTTCACGCCCTTCCTGCTACGCCCGCGCCATAATGTCGGTGGTGGTGTATTCGCCC‑TGAGCATTAttg > 1:65854/1‑251 (MQ=255) aCATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTGCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTAttgtt < 2:382054/251‑1 (MQ=255) aTCGCGCCCGTGAGGTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGACTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑Tg < 1:117925/237‑1 (MQ=255) gAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCTTCTAC‑TTCGCTTTAACGTTGGGGGTG‑GACGGCGACGATTTCACGCCCTTCCTGATACGCCCGCGCAATAATGTCGGGGGTGTAGGATTCGCCC‑CGAGGATTATTTTTTGG‑T‑AGCTTCg‑cc > 1:168590/1‑251 (MQ=255) aGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTgcg‑caa < 2:82213/251‑3 (MQ=255) tAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGcc < 1:423264/187‑1 (MQ=255) cGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCTTCTAA‑TTCGCTTAAACGTTGCGGGTG‑TACGGCGACGATTTTACGCCCTTCCTTATACGCCCGCGCAATAATGTCGGTGATGTAGGATTCGCCC‑CGAGCATTTTTGTT‑GG‑GCAGCttttcccaccacc > 1:322618/1‑240 (MQ=255) gTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTTTTT‑AC‑GCCTTTTAC‑TTCGCTTTAACGGTGCGGGTG‑AACGGCGACGCATTCACGCCCTTTCTGATACGCCCGCGCCATAATGTCGGGGATGTAGTATTTCCCC‑TGAGCATTTTTTTT‑GG‑TCAGCTTCG‑CCCGCCcgcg > 2:329281/1‑251 (MQ=255) aCCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGt < 1:362513/250‑1 (MQ=255) ccACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGttt < 1:272643/251‑1 (MQ=255) gCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑ACCTTCTAC‑TTCGCTTAAACGTTGCGGGTG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCCGCGCCAGAATTTCGGGGATGTAGGATTCTCCC‑TGAGCATTTTTTTTTGG‑T‑AGCTTCG‑CCAGCCAGCGTTTCatt > 1:104375/1‑250 (MQ=255) cAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTgc < 1:370592/250‑1 (MQ=255) aTCGCGCAGCATAACGCCTGCTAACAGCAGTTTGTCGGCCTGTTCGGACTGATAAACCCGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCACTTAAACGTTGCGGATG‑AACGGCTACGATTTCACGCCCGTCCTTATACGCCAGCTCAATAAGGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTTTT‑TA‑TCACCTTCG‑CCAGCCAGCGTTTCATATCTTCGCC‑GTTGGCAATCa < 2:390647/251‑1 (MQ=255) caTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCgg < 1:416863/251‑1 (MQ=255) aaCGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TGATTC‑CT‑CCCCTCTAC‑TTCCCTTTAAAGTTGTGGGTG‑GACGGCGGCGATTTCTCGCCCCTCCTGATTCGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCCTG‑GCATTATTTTT‑GG‑TCAGCTTTG‑CCCGACCGCGTTTCCTATCTGCGCC‑CTTTGCGATCAGaaacgccgggg > 2:71357/1‑242 (MQ=255) gCTAACAGCAGTTTTTCAGCCTGTTCGGCCTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑CTATTC‑AC‑GCCCTCTCC‑TTCGCTTAAACGTTGCGGGTG‑AACGGCGACGATTTCACCCCCCTCCTGATCCGCCAGCGCAATAATGTCGGTGGTGTAGTATTTCCCC‑TGCGCATTTTTTTT‑GG‑TCCGCTTCG‑CCCGCCCGCGTTTCCTATTTGCGCC‑GTTGGCAATCAGAATGCCCGTGTTGAtctc > 1:348113/1‑251 (MQ=255) gCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑CC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGAtctc < 2:130090/251‑1 (MQ=255) gCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTACAGACGGGAGAGTTGCAGGCGG‑TTTTTT‑AC‑GCCCTCTAC‑TTCCCTTAAACGTCGCCGGTGCAACG‑CGACCGTTTAACCCCCCTCCCGATACCCCAGAGCACAAATGTCGGGGATGTGGTATTCTCCC‑TGAGCGTTATTTTT‑GG‑TCACCTTCGTCCA‑CCCGCGGTTTTTATCTGCGCC‑CCTGGGGATCAGAATGCCGGGGTTGctctt > 1:46557/1‑250 (MQ=255) gCTAACAGCAGGTTTTCAGCCTGTGCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGAtc < 2:22060/249‑1 (MQ=255) agcagTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑GCCTTCTAC‑TTTGCTTTAAAGTTGCGGGTG‑AAAGGCGCCGCTTTCACCCCCTTCCTTATACGCCAGCGCAATAATGTCCGTGATGTAGTATTCGCCC‑CTAGCATTTTTGTT‑GGGTC‑GCCTCG‑CCAGCCAGCGTTTCATATCTTCGCCCGTTGG‑AATAAGAATGGCGGGGTTTATTTCCTggat > 1:412524/1‑248 (MQ=255) gcagTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGTGAGAGTTGCAGGCGG‑TTATTC‑CC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCTCGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCT‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATc < 2:153109/251‑1 (MQ=255) cagTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTT‑AC‑ACCTTTTTC‑TTTCCTTTAACGTTGCGGGTG‑AACGGCGACGATTTCACCCCCTTCCTGATACCCCCGCGCAATAATGTTGGGGGTGTAGTATTCGCCC‑TGCGCATTTTTGTT‑GG‑GCTGCCTTG‑CCCGCCAGGGGTTTTTATCTGCGCC‑GTTGGCAATTAGAATTCCGGGGGTGGTCTCCTGGATCt > 1:62084/1‑251 (MQ=255) ttttCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GGTGGCAATCAGAATGCCGGTGTTGAGCTCCTGAATCTGAc < 2:62084/250‑1 (MQ=255) gTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCtcgt < 1:392040/249‑1 (MQ=255) gTTCGGACGTATAAACACGCTCCTGACGGGTGAGTTTCAGGCGG‑TTAGTC‑TC‑GCTTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGTCGTCGATTTCACGCCCTTCCTGATACGCCAGCGCAATAAGGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GT‑GCAGCTTCT‑CCAGCCAGCGTTTCATATCTGCGCA‑GTTGGCTATCAGAAGGCCTGTGTTGATCTCCTGAATCTGACGCTGCtcgtcg < 2:265122/251‑1 (MQ=255) gATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATc < 1:290528/250‑1 (MQ=255) aTAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCCCGTCGGTGGCATCtt < 1:15943/251‑1 (MQ=255) tAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCTCCC‑TGAGCATTATTTTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCtcgtc < 1:29933/239‑1 (MQ=255) tCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCCTCTAC‑TTCGCTTAAAAGTTGCGGGTG‑AACGGCGACGATTTCACGCCCCTCCCGATACGCCCGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTTTT‑TG‑TTAGCTTTT‑CCAGCCCGCGCTTTATATCTGCGCC‑GCTGGCAATCAGAATGCCGGTGTTGTTCTCCTGAATCTGCCGCCGCTCGTCGGGGGCATCTTTGTGCTccac > 1:19697/1‑248 (MQ=255) gggAGAGTTGCAGTCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGGAGTATTCGCCC‑TGAGCATTAGTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGAGCTCCTGAAGCTGACGCTGCtc < 1:132499/220‑1 (MQ=255) gTTGCAGGCGG‑TTATTC‑AC‑TCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTGCACGCCCTTCCTGATACGCCAGCGCAATAAGGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCATCTTCG‑CCAGCCAGCGTTTCATATCGGCGCC‑GTTGGCAATCAGAATGCTGGTGTTGATCTCCTGGATCTGACGCTGCTCTTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACt < 2:269975/251‑1 (MQ=255) cGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGtt < 1:8126/251‑1 (MQ=255) tATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTc < 2:322618/250‑1 (MQ=255) tATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTc > 1:370082/1‑250 (MQ=255) tATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTc < 1:162520/250‑1 (MQ=255) tC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACgg > 2:275017/1‑251 (MQ=255) | GATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGG‑TTATTC‑AC‑GCCTTCTAC‑TTCGCTTAAACGTTGCGGATG‑AACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCC‑TGAGCATTATTGTT‑GG‑TCAGCTTCG‑CCAGCCAGCGTTTCATATCTGCGCC‑GTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGG > NC_000913/3914274‑3914772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |