Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 2,312,100 | 24707 bp→A | [ompC]–[gyrA] | 16 genes [ompC], micF, rcsD, rcsB, rcsC, atoS, atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaT, yfaA, [gyrA] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2312100 | 2336806 | 24707 | 86 [0] | [1] 87 | [ompC]–[gyrA] | [ompC],micF,rcsD,rcsB,rcsC,atoS,atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaT,yfaA,[gyrA] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2312099 | 0 (0.000) | 85 (1.530) +A |
76/488 | 0.0 | 99.4% | coding (651/1104 nt) | ompC | outer membrane porin C |
? | NC_000913 | 2336807 = | 1 (0.020) | coding (2614/2628 nt) | gyrA | DNA gyrase subunit A |
AGCCAGGGACGGACGCAGACCGAAGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGTGT > NC_000913/2311859‑2312349 | aGCCAGAGACGGACGCAGACCGAAGTCGAACTGGTAATGAGCAACAGCATCGAAGTTCTGAGATTTGTACACCCAAACCAGGGAACATACCCGAGTTGCCTTGTAGGTCTCGGTATACTGCGCAGCAAGGCGGATGTTGTCAGCGTAGTATTTCAGACCACCCGCGAAGGTTTCAGCAAGGTCGTGGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATcagatcgtagt > 1:279826/1‑241 (MQ=255) aGGGACGGACGCAGACCGAAGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaac > 1:232044‑M1/1‑237 (MQ=255) acggaagCGGACCGAAGTCGCACTGGTCCTGAGCAACAGCTTCGCCGTTCTGCGCTTTGTTCGCCCACCCCAGGGAACCTATGCGAGTTGCGTTGTAGGTCTGGGTGCACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCTGTTACTGATGTAAGCAGCGGTGTTCAGAGCATCAGTACGTTTGGAGCTGGAGATCcgctcgccgtcaacttcc > 2:36868‑M1/1‑233 (MQ=255) gACCGAAGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGATTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccgg > 1:253443‑M1/1‑224 (MQ=255) gAAGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGATTTCAGCACGGTCCCCGTTATCGATGTAAGCAGCGGTGTGCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcggtaacgtccacttccggagctc > 2:76921‑M1/1‑220 (MQ=255) aaGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgat < 1:95118‑M1/251‑33 (MQ=255) aaCTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGGTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGGGTGGAGCTGTAGATCagctcgtcgtcaacgtccacttccggagcgatttcatc < 2:211784‑M1/251‑39 (MQ=255) gTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccc < 2:140744‑M1/251‑44 (MQ=255) gAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttcc < 1:863‑M1/251‑49 (MQ=255) cAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcg < 1:145574‑M1/251‑52 (MQ=255) cAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggc > 1:353255‑M1/1‑197 (MQ=255) aGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTCTCAGCGGGGGCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtcaacttccgtagcgatttcatcgtccccttccgcggcac > 2:249498‑M1/1‑196 (MQ=255) gCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcact < 1:184169‑M1/251‑57 (MQ=255) tCGAAGTTCTGTGCTTGGTTCGCCCAACCCAGGTAACCTACGCGAGTTGCGTTGTAGTTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCGGACCGCCAGGGTAGTGTTCAGCACGGTCGCCGTTACCGAGTTAAGCAGCGGTGTTCTGACCATCAGTACGGTTGGAGCTGGAGATCatctcgtcgtcaacgtgctcttccgaagcgatttcatcttccccttcctcggcactgc < 2:427738‑M1/250‑59 (MQ=255) gAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgt > 1:29845‑M1/1‑190 (MQ=255) cTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTCTCGGCGGTGTCCGTGTCATTGATGTAAGCAGCGGTGTTCTGAGCATCAGTCCGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgaggcactgccgtcgatgg > 2:216498‑M1/1‑184 (MQ=255) gtgCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTATGGGTGTACTGACCAGCCCGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCCGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgctggt > 1:398593‑M1/1‑182 (MQ=255) gCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGTTTTCAGCACGGTCGCCGTGACCGATGTAAGCAGCGGTGTGCTGAGCATCAGTACGTTTTGAGCTGGAGATCagctcttcttcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttc < 1:276508‑M1/251‑81 (MQ=255) cccAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcc < 1:233008‑M1/251‑82 (MQ=255) aCCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGATCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCTCCGTTACCGATGTAAGCAGCGGTGTGCTGAGCATCAGTACGTTGGGAGCTGGAGATCagctggtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgt < 1:265960‑M1/251‑86 (MQ=255) aCCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgc > 2:24246‑M1/1‑166 (MQ=255) ccAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACTGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtca < 1:335517‑M1/251‑88 (MQ=255) aGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaac > 1:78089‑M1/1‑162 (MQ=255) gtgaccctacgcGAGTTGCGTTGTAGGGTTGGTTGTACTGAGCAGCCAGTTAGATGTTGTAATCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaccggccactgccggagcggtttcatcttccccttccgcggcactgccgtcgatggtgtgcagttcttcctcctcaccc < 2:65995‑M1/246‑91 (MQ=255) gggAGCCTACGCGAGTTGCGGTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATTTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCGGGATATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtctccttccgcggcactgacgtcgatggtatccagatcttcctcgtcaacc < 2:353255‑M1/251‑91 (MQ=255) gggAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaacc < 2:337983‑M1/251‑91 (MQ=255) cTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttc > 2:57770‑M1/1‑155 (MQ=255) cTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttc > 1:38476‑M1/1‑155 (MQ=255) aCGCGAGTTGCGTTGTAGGGCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagc > 1:10547‑M1/1‑153 (MQ=255) aGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacac > 1:398672‑M1/1‑148 (MQ=255) aGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGCAGATGTTGTTCGCGTCGTATTTCAGACAACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTATGAGCATCAGTACGTTTGGAGCTGGAGATCagatcgtcgtcaacgtccacttcgggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacac > 1:199837‑M1/1‑148 (MQ=255) gCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGTGTTCAGCACGGTCGCCGGTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgtt < 1:216498‑M1/250‑107 (MQ=255) ggaggTCTGGGTGTACTGAGCAGCCAGGTAGATTTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagac < 2:91773‑M1/249‑113 (MQ=255) tAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacc > 1:317372‑M1/1‑138 (MQ=255) aGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTGGTTAGCGTCTTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccgtccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagaccc < 2:351859‑M1/251‑115 (MQ=255) ggTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggatcgatttcagcgtccccttccgcggcactgccgtcgatgttatccagagcttcctcgtcaaccggttcagcaacacgttgcagaccca < 1:277182‑M1/251‑116 (MQ=255) gtgtACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCGGGAGATCagctcgtcgtcaacgtccacgtccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccacgacgtt < 2:254502‑M1/251‑123 (MQ=255) gtACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGATCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttt < 1:142583‑M1/250‑124 (MQ=255) ggTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagt > 1:338370‑M1/1‑113 (MQ=255) ggTAGATGTTGTTAGCATCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCATTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggaccgatttcatcgtccccttccgcggcacttccgtcgatggtatccaaatcttcctcgtcacccggttcatcaacacgttgcagtcccactacgttttcatcttccgcagta < 1:38654‑M1/251‑139 (MQ=255) tAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacg > 1:13843‑M1/1‑111 (MQ=255) gttgttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCGGCGCGGTCGCCGTTACTGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGCTCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgaggcactgccgtcgatggtatccagatcttcctcgtcaacaggttccgcaacacgttgcagacccactccgttttcatcttccgcagtccggatg > 2:286474‑M1/1‑106 (MQ=255) gttgttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatg > 1:88373‑M1/1‑106 (MQ=255) gCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcac < 1:192121‑M1/251‑153 (MQ=255) cgtcgtATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcttcgtcaacgtccacttccggagcgatttcatcgtccccttc < 2:178305‑M1/145‑48 (MQ=255) cgtcgtATTTCAGACCACCAGTGTAGGTTTCAGCACGGCCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttc > 1:178305‑M1/1‑98 (MQ=255) gtcgtATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagaccca > 1:172128‑M1/1‑97 (MQ=255) gtcgtATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatgtcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagaccca < 2:172128‑M1/212‑116 (MQ=255) gtATGTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccct < 2:153975‑M1/251‑158 (MQ=255) tCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtg > 1:264848‑M1/1‑89 (MQ=255) aGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgtt > 1:102855‑M1/1‑87 (MQ=255) accaccAGTGGAGGTTGCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagcgcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttac < 2:313166‑M1/251‑167 (MQ=255) gTTTCAGCACGGTCGCCGGTACCGATGTAAGCAGCGGTGTGCTGAGCAGCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccgtccgcggcactgccttctatggtatccagatcttcctcggcaaccggtgcagcaacacgttgcagacccactacgttttcagcttccgcagtacggatgaggatcacgccctgtgtgttacggcccacgatgct < 2:201108‑M1/251‑180 (MQ=255) tttCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgctgctg > 2:274724‑M1/1‑71 (MQ=255) ttCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctg > 1:4479‑M1/1‑70 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGCGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgattt > 1:43730‑M1/1‑67 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttaatcgtccccttccgcggcactgccgtagatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgctttaatcttccgcagcacggatgaggatcacgcctcgggagtaacggcccacgctcatgattt > 2:232551‑M1/1‑67 (MQ=255) aCGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccg > 1:239431‑M1/1‑64 (MQ=255) cGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgattcccgaaacgcga < 1:330815‑M1/251‑196 (MQ=255) gTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgacacgcg > 2:113206‑M1/1‑55 (MQ=255) tACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGCCCTCGAGATAagctcgtcgtcaacgtccacttccgaagcgatttcatcgtcaccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacaagttgcagacccactacgttttcatcttccgaagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagt > 1:273452‑M1/1‑53 (MQ=255) gATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgta < 2:78089‑M1/251‑203 (MQ=255) gATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttccagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgctgctgctttccgaaacgcgcgaccgt > 1:65108‑M1/1‑49 (MQ=255) gTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtacc > 1:321372‑M1/1‑46 (MQ=255) gcGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCcgctagtcgacaacgtccacttacggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgacacgcgagtacgtaccagcgtacc > 1:254623‑M1/1‑39 (MQ=255) gcGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtacc < 2:101904‑M1/251‑213 (MQ=255) ggTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccgg < 1:222101‑M1/251‑215 (MQ=255) tgtTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggc > 1:188536‑M1/1‑35 (MQ=255) gtTCTGAGCATCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcat > 1:303578‑M1/1‑34 (MQ=255) tCTGAGCAGCAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccatccgcggcactgccgtcgatggtatccagatcttcctcgtcaacctgttcagcaacacgttgctgactcactgcgtgttcatcttcctcagtacgtatggggagcacgccctgggtgtttcggcccactatggtgatttccgaaacgcgagtacgttccagcgtaccggcatc < 1:416882‑M1/250‑219 (MQ=255) gAGCATCAGTACGTTTGGAGCTGGAGATCagctcgccgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtg > 2:42841‑M1/1‑29 (MQ=255) cAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacgcgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatc < 1:286474‑M1/251‑229 (MQ=255) cAGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatc > 1:329472‑M1/1‑23 (MQ=255) aGTACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagccccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggggatcatc > 2:118144‑M1/1‑22 (MQ=255) tACGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcctcggtgatcatcatg > 2:54009‑M1/1‑20 (MQ=255) cGTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgcaccggcatcggtgatcatcatgat > 2:121071‑M1/1‑18 (MQ=255) gTTTGGAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatcatgatc > 2:30183‑M1/1‑17 (MQ=255) gAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatcatgatctggtc < 1:278754‑M1/251‑240 (MQ=255) gAGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatcatgatctggtc > 1:169001‑M1/1‑12 (MQ=255) gAGCTGGAGATCagctcgtcgtcaacgtccacttccagagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtcccggactcggtgatcatcatgatctggtc > 2:33471‑M1/1‑12 (MQ=255) aGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgacacgcgagtacgtaccagcgtaccggcatcggtga > 2:261434‑M1/1‑11 (MQ=255) aGCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtga < 1:261434‑M1/234‑224 (MQ=255) gCTGGAGATCagctcgtcgtccacgtccccttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcctcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgcgtacgtaccagcgtaccggcatcggtgatcatcatgatctggtcgc > 2:22252‑M1/1‑10 (MQ=255) gCTGGAGATCagctcgtcgtcaacgtccacttccggagcgatttcatcgtacccttccgcggcactgccgtcgatggtatccagatcttcctcgtccaccggttccgcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatccgtgatcatcatgacctggccgc > 2:373889‑M1/1‑10 (MQ=255) gaTCagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtaccagcgtaccggcatcggtgatcatcatgatctggtcgcagtcat > 1:144654‑M1/1‑4 (MQ=255) cagctcgtcgtcaacgtccacttccggagcgatttcatcgtccccttccgcggcactgccgtcgatggtatccagatcttcctcgtcaaccggttcagcaacacgttgcagacccactacgttttcatcttccgcagtacggatgaggatcacgccctgggtgttacggcccacgatgctgatttccgaaacgcgagtacgtactagcgtaccggcatcgttgatcatcatgatctggtcgcagtcatcta < 1:73211‑M1/251‑251 (MQ=255) | AGCCAGGGACGGACGCAGACCGAAGTCGAACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCTGGGTGTACTGAGCAGCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGTGT > NC_000913/2311859‑2312349 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |