| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,351,171 | Δ239,229 bp | ycjD–ydeT | 230 genes ycjD, sapF, sapD, sapC, sapB, sapA, ymjA, puuP, ymjE, puuA, puuD, puuR, puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH4, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, ynaN, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM, uspF, ompN, micC, ydbK, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD2, insC2, ydbA, insI2, ydbA, pdxI, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, cybB, rydC, ydcA, yncP, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insQ, ydcO, sutR, rlhA, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ortT, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, ydcD, yncO, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddY, digH, gadC, gadB, pqqL, yddB, yddA, yneP, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1351171 | 1590399 | 239229 | 41 [0] | [0] 40 | ycjD–ydeT | ycjD,sapF,sapD,sapC,sapB,sapA,ymjA,puuP,ymjE,puuA,puuD,puuR,puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH4,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD2,insC2,ydbA,insI2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,cybB,rydC,ydcA,yncP,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insQ,ydcO,sutR,rlhA,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,ydcD,yncO,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddY,digH,gadC,gadB,pqqL,yddB,yddA,yneP,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1351170 | 0 (0.000) | 40 (0.730) | 38/482 | 0.2 | 100% | intergenic (‑131/+237) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| ? | NC_000913 | 1590400 = | 0 (0.000) | intergenic (‑399/+454) | ydeT/hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA | |||||
CTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGGA > NC_000913/1350920‑1351413 | cTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGAGATACAGTAGGCGATGGATAGTTTGCTGGCAACAACGGTTACCAGCATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGAGAGTAGCTATAGTTGCCAGGTCCg > 2:388306/1‑251 (MQ=255) ggTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcg > 1:55293‑M1/1‑249 (MQ=255) ggTGAATGCCAGTTCAGCTCCTTCGCGGGGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaat > 1:331625‑M1/1‑245 (MQ=255) aaTGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcc < 2:39296‑M1/251‑11 (MQ=255) aggtcagCTACTTCACGGTGCATCGCCTGAGCGATACCGGAGGCGATGGATACTTTGCTGGCAACACCGGTTACCAGTATGCGATTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGCTTAGTCGTTTTAGTACACAGTACGAACAGATAAACGGTTATTATAATCACCCTGGCTGGGAGAAGCTATAGATGCCAGGTCCGcgcatattcccgac > 2:118855‑M1/4‑235 (MQ=255) ccTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggat < 2:336044‑M1/251‑26 (MQ=255) ggTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttcc > 1:174250‑M1/1‑219 (MQ=255) ccTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgac > 1:249596‑M1/1‑210 (MQ=255) cGATACCGTAGGCGATGGCTAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcat > 2:409972‑M1/1‑204 (MQ=255) tACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACCGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattaccgactgaaatgggttagcttccgtaaccgacagcataggc > 1:216876‑M1/1‑201 (MQ=255) cacCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgcctgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattc > 1:162918‑M1/1‑171 (MQ=255) acCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGATTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagc > 1:173492‑M1/1‑170 (MQ=255) aCCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTCTTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtc > 2:26293‑M1/1‑163 (MQ=255) aCCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGAGTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTGGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtc < 1:388306‑M1/251‑89 (MQ=255) ccAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAAGCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaagattcccgactgaaatgggatagctgccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcagtcatcatctgtcg < 2:249596‑M1/251‑90 (MQ=255) aCCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcatt < 1:319418‑M1/250‑102 (MQ=255) ccGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcat > 1:84087‑M1/1‑148 (MQ=255) ccGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcat < 2:84087‑M1/224‑77 (MQ=255) aaagaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacg > 1:68112‑M1/1‑144 (MQ=255) aagaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgcctgaaatgggatagcttccgtaaccgacagcataggctgcggtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgt < 1:140637‑M1/251‑109 (MQ=255) aagaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgt < 1:306200‑M1/251‑109 (MQ=255) cccATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatt < 1:237345‑M1/251‑116 (MQ=255) cATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttc < 1:370814‑M1/251‑118 (MQ=255) aaTCCTTATTGTTGATGCTGGTTGTGCCTTAAAATCAGGCGATTCGTCGTTTTAGGAAACAGTACGAACAGAGAAACGGTTATTATAAGCAACCTGGCTGTGAGTAGTTATAGTTGCCAGTGCCGcgtttattcccgactgaaatgggatagcttccgtagccgacagtataggctgctgtggtgacatcgtaatgttcattcatcatgtgtcgcctgacttcattgagacgtagccatttctgataccg < 1:199015‑M1/250‑126 (MQ=255) tgttgtGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgtacattcagcatctgtcgcctgacttcatggagacgtagccatttctgataccggagtggactcattcccgc < 1:178737‑M1/249‑144 (MQ=255) tgCCGGAAAATCAGGCGATTCTTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctggggtgacatcgtaatgttcattcagcatctgtcgcctggcgtcagtgagacgtagccattgctgataccggagtggacgcattcccgcttgatc < 2:30583‑M1/250‑150 (MQ=255) cTGAAACTCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTCTTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGACCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagcaatttctgataccggagtggactcattcccgcttgatccgtc > 2:349812‑M1/1‑98 (MQ=255) cAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaata < 1:409972‑M1/251‑162 (MQ=255) ggCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtgtggacatcgtaatgttaattcagcatctgtcgcctgacttcattgggacgtagccatttctgatacgggagggaacccattcccgcttgatccgcccttaatta > 1:160883‑M1/1‑88 (MQ=255) ttttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccct > 2:3055‑M1/1‑76 (MQ=255) aaaCTGTACGAACAGATAAACGGTTATTATAAGCACCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgt < 2:255036‑M1/251‑183 (MQ=255) gAACAGAAAAACGGTTATTATAATGAAACTGGCTGTGAGTCGCTATAGTTACCAGGTCAGcgactattcccgactgaaatgggatagcttccgtaaccgaaagcataggctgctgaggtgacttcgtaatgttcattcagaatctgacgcctgacttcattgagacgtagacatttctgataccggagaggactcattacagcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtctg > 2:53924‑M1/1‑60 (MQ=255) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagt > 2:103078‑M1/1‑56 (MQ=255) ttattaTAATCAACCTGGCTGGGAGTAGATATAGTTGCCAGGTCCGcgaatcttcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtctcctgacttcattgagacttcgccatttcttataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctgttgttttcgtatgcagtttctatgctc > 1:165963‑M1/1‑46 (MQ=255) ataATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagac > 2:70628‑M1/1‑41 (MQ=255) aaTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacac < 1:216447‑M1/251‑213 (MQ=255) aaTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacac > 2:131285‑M1/1‑39 (MQ=255) aTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacact > 1:49182‑M1/1‑38 (MQ=255) aGCTATAGTTGCCAGGTCCGagaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatgggg < 1:118855‑M1/250‑231 (MQ=255) cAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagccactgcgctcttagcatggggcagggaataacca < 1:364231‑M1/251‑244 (MQ=255) cAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataacc > 2:223853‑M1/1‑8 (MQ=255) | CTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGGA > NC_000913/1350920‑1351413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |