| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,455 | 1 | . | G | 97.9% | 169.1 / NA | 49 | intergenic (+589/+167) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base G (24/23); minor base T (0/1); total (25/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
TTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGC‑CA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGT > NC_000913/3560213‑3560692 | ttcccATCAACGGGTTAGCAACGGTGAGATTGTGGGTGACAAGGCGCAAATTGCTGTGATTGAGCAGGGCGTGCGCTCCCGCTTCCGGCGGGGTGCGGATATCGATAAACAGCGTCGGGCAATGGGGGCTTTGATCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTACCCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGAt < 1:433027/247‑1 (MQ=255) cATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGt > 2:81333/1‑251 (MQ=255) aaCGTGTTAAAAACGTGGAGATTGTTGGTGACAATGAGCAAATTGCTGGGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGAGGCGCTCTTTTTCTTA‑GGTCTGGGTGGCCTGGCGATCTTGCCACGGGGT‑GTTAACCGAACTGGAAGGCAGAGCAGCACC‑GCCACGATGGCGCA‑TAATCAGGTTTTg > 2:145971/1‑251 (MQ=255) gtgtTAGCAACGTTGAGCTTGTTGGTGACAATGCGCAACTTGCTGTGATTGAGCATGGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTACCCGCACTGGAAGGCAGCGCCGAACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTc > 2:223041/1‑251 (MQ=255) gCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGcc > 1:148313/1‑249 (MQ=255) aaCGTTGAGATTGTTGGTGACAATGCGCATATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGcc > 2:103920/1‑250 (MQ=255) gatttttttgGTGACATTGCTCATTTTGTTGTGTTTGAGCGGTGCGTGCGCTCCCTCTTCCGGCGTGGCTCCGATATCGATAAACTGCTTCGAGCCATTGGTGTTTTGCTCCGCCACTTTGCGGGCGTTGCGCTCTTTTTCTTC‑GGTCTGGGTGTCCTTGCGATCGTGCCACGGCGT‑GTTACCCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGa < 1:227683/244‑1 (MQ=255) ggTGACAATGCGCAAATTGCTGTGATTGGGCAGGGCGTGCGCTCCCGCTTCCGGCGGGGTGCCGATATCGATAAACAGGGTCGGGCCATGGGGGATTGGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggc < 1:222195/251‑1 (MQ=255) ggTGACAAGGCCCAAATTGTTGGGATGGAGCGGTGCGTGCGCTCCCGCTCCCGGCGTGGTGCCGTTATCGAAAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggc < 1:341305/251‑1 (MQ=255) tGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTc > 1:92731/1‑251 (MQ=255) tggtgCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATa > 1:161292/1‑250 (MQ=255) ggtgCCGATATCGATAAACCGCGTCTGGCCATGGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAc < 1:214189/251‑1 (MQ=255) cGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGAGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCCCATTGAGGTCGCGGCGAATAGTCTGAGGGCTGACGGAGTAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgc > 2:107961/1‑251 (MQ=255) gaatgcgataagcagctgctggCCATTGGGTATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGGCTGGTTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACGGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgct < 1:259034/230‑1 (MQ=255) tatCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGt > 2:46585/1‑251 (MQ=255) cGATACACAGCGTCGAGCCCTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTAGCGGCGAATAGTCTGCGGGCTGACGGAGACATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtttt > 2:248908/1‑250 (MQ=255) cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGACACTTTGCGGGCGCTGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGCACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGTGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtttt > 2:268515/1‑250 (MQ=255) gctAAACACCGTCGAGCCCTTGGGGATTCGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGACTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGACCTGGAAAGCGGCGC‑ACACCCGCCATGATGGC‑CCCGGATCAGGTTTTGCTCCGCCCGCTCCTTGAGGACGCGCCGAAAAGTCTGCGGGCTGCCGTACAACTGCTATACCAGCTCTTCGGTACTGACATCACCCTGCTGTTTat > 2:365763/3‑250 (MQ=255) aTAAACAGCGTCGAGCCATTGGGCATTTGCTCCGCCACTTTAGGGGCGATACGCTCTTTTTCTTC‑GCACTAGGTGGCATAGCAATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCAATGATGGCGCA‑GGACAAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGCCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc > 1:388696/1‑251 (MQ=255) aaaccggggtggacccATGGGGGTTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCAGGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCTAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCGGCTGTTTAAcc < 1:145892/237‑1 (MQ=255) acaaaccccaaTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACGGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCg < 1:101194/241‑1 (MQ=255) gAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataat > 1:240193/1‑251 (MQ=255) ggggATTTGCTCCGCCACTTTGCGGGAGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGAACAGGTTTTGCTCCGACAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTTTACCAGCTCTTCGGTACTGACATAACCTTGCTGTTTAACCACTTCGATAATCCCGTtgt > 1:2055/1‑251 (MQ=255) ggggACTTGCTCCGCCCCTTTGAGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCAACGGCGT‑GTTCACCGAACTGGACGGCAGCGCCGCCCC‑GCCATGATGGCGCA‑GGCTCAGGTTTAGCTACGACAGCTCATTGAGGTCGCGGCGAATAGTCTCCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGAGAATACCGTtgt > 2:406115/1‑251 (MQ=255) ggtccctcatcttggcgtgCGATGCGCTTTTTTTCTTC‑GGTCGGGGGGGCCGCGCGATCGTGC‑ACGGGGTTGTAAACAGACCGGGAAGGCAGCGCGCCGCC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGGACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTtg < 2:150578/233‑1 (MQ=255) gCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTtgt > 1:162063/1‑251 (MQ=255) ccGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGCCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgtt < 1:233678/251‑1 (MQ=255) cGCCCCTTTGCGGGCGTTGCGCTCTTTTTCTTC‑GGTCGGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgttt < 1:9244/251‑1 (MQ=255) cTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTCACCGAACTGGCAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATACCCCTGATGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc > 1:158215/1‑251 (MQ=255) gggggCGATGCGCTTTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAttt < 1:103920/249‑1 (MQ=255) ggCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGGGTTTGTTTCATTtat > 2:358609/1‑250 (MQ=255) ggCGATGCGCTCTTTTTCTTC‑GGTCGGGGTGGCCTTGCGACCGTGCCACGGCGT‑GTTACCCGAACTGGAGGGCAGCGCGGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtata < 1:415647/251‑1 (MQ=255) gcgctGCGCTCTTTTTCTTC‑TGTCGGGGGGGCTTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATaa < 2:92731/247‑1 (MQ=255) tttttCTTCCGGGCTGGGGGCCCTTGCGACCGTGCCCAGGCGT‑GTTAACCGAACGGGAAGCCAGCGCCGCCCC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGa < 2:240193/250‑1 (MQ=255) tttttCTTC‑GGTCTGGGTGGCCTTGCGGTCGTGACACGGCGT‑GTTAACCGAACCGGCAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGATCATTGAGGTCGCGGCGAATAGTCTGAGGGCTGACGGAGAAATGCTCTACCAGCACTTCGGTAATGACATAACCCTGCTGCTTAACCAGTTCGATCATCCCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAat > 2:253642/1‑251 (MQ=255) tttttCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAat > 2:199901/1‑251 (MQ=255) gtcggggtgggcgttcGATCGTGCCAGGGCGT‑TTTAACCGACCGGGAAGGCCGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGATAAATGCTCTACCAGCTCTTCGGTACTTACATAGCCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACTTTGTGGTTGTTTCATTTATAAATCCCTGGAAGTAttttcgtt < 2:407112/236‑1 (MQ=255) gTGGCCTTGCGATCGTGCCCCGGCGG‑TTTAACCGACCGGGAAGGAAGCGCCGCCCC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAAGTATTTTCGTTTTcgcg < 1:125861/251‑1 (MQ=255) ggCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCgcgc > 1:110546/1‑250 (MQ=255) ccTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCAtt < 1:22138/251‑1 (MQ=255) ggCGAGCGTGCCCCGGGGT‑GTTAACCGAGCTGGAAGCCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTg < 2:318819/248‑1 (MQ=255) cggTGCCCCGGGGT‑GTTACCCGAGCTGAAGGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAAt < 2:123269/249‑1 (MQ=255) gCCACGGCGT‑GTTAACCGAAATGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAATGCTCTACCAGCTCTTCGGTACTGATATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATcaac > 1:165635/1‑251 (MQ=255) gt‑gtTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCa < 1:46585/251‑1 (MQ=255) ccgggagggaggcgcCGCACC‑GCCAGGATGGCGCA‑GGATCAGGTTTTGCTACGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAccc < 2:184686/240‑1 (MQ=255) ggAAGGCAGCGCCGCACC‑GCCATGATGTCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGGGTTTGTTTCATTTATAAGTCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACg > 1:99770/1‑251 (MQ=255) aGGCAGCGCCGCACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCt > 2:298818/1‑251 (MQ=255) ccccgcACC‑GCCATGATGGCGCA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCAGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCTTGCTGTTTAACCAGTTCGATAATCCCGTTGTTACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTGCGCGCATTGAGCGAATCAACAAAAGCCATCGATAAACCTACGGCTAACCCg < 1:166371/249‑1 (MQ=255) cc‑GCCATGATGGCTCA‑GGATCAGGGTTTGCTCCGCCAGCGCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTTTCGTTGTGTTTGTTTCATTTATAATTCCCTGGAATTATGTTCGTTTCCGCGCATTGGGCGGATCAACATAAGCCATCGCTaatttctccgttaaccgggcgatgt < 2:411240/251‑24 (MQ=255) | TTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTC‑GGTCTGGGTGGCCTTGCGATCGTGCCACGGCGT‑GTTAACCGAACTGGAAGGCAGCGCCGCACC‑GCCATGATGGC‑CA‑GGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGT > NC_000913/3560213‑3560692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |