Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,922,994	T→C	intergenic (‑554/+63)	atpI ← / ← rsmG	ATP synthase accessory factor AtpI/16S rRNA m(7)G527 methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,922,994	0	T	C	100.0%	212.6 / NA	58	intergenic (‑554/+63)	atpI/rsmG	ATP synthase accessory factor AtpI/16S rRNA m(7)G527 methyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/26);  total (32/26)

TTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGTAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGGCACCAGCTCAC  >  NC_000913/3922760‑3923239                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      ttATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGgttgtt                                                                                                                                                                                                                                       >  1:378266/1‑251 (MQ=255)     gATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTGTTAGCAGACTGAGATTTTCACTAATGACTTAGTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAAGGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGgttgttgtt                                                                                                                                                                                                                                    <  1:912828/250‑1 (MQ=255)                 aaaaaaCAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAACAGAAAACCTGGTTGTTGTTAACAGTCTAACCg                                                                                                                                                                                                                       <  2:459450/250‑1 (MQ=255)                               gTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATg                                                                                                                                                                                                         >  1:595172/1‑251 (MQ=255)                                         aTGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGCTGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGa                                                                                                                                                                                                        >  1:569556/1‑242 (MQ=255)                                         aTGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGa                                                                                                                                                                                                        <  2:569556/242‑1 (MQ=255)                                           gACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAATCCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGAt                                                                                                                                                                                              <  2:869564/250‑1 (MQ=255)                                           gACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGAt                                                                                                                                                                                              <  2:660780/250‑1 (MQ=255)                                              aTTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATaaa                                                                                                                                                                                           >  2:804300/1‑250 (MQ=255)                                                 tACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAaaat                                                                                                                                                                                        <  2:531919/250‑1 (MQ=255)                                                         aaaaaCCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTGATGATTTTTTTGATAAAAATTAAATTTTa                                                                                                                                                                               <  1:337037/251‑1 (MQ=255)                                                             accaccCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTg                                                                                                                                                                           >  1:299806/1‑251 (MQ=255)                                                                 cccATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTATCCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCttt                                                                                                                                                                       <  1:933113/251‑1 (MQ=255)                                                                    aatgtcATTGTTAATAATGTGTTAGCAGCTAACGAGTGTGCTTAGCGCCGAGTTTTAGCAGACTGATATTTTCACTAATGACTTATGTTCTGCTTACCAAAAAGAGCCACGTTATCTTGTTGATGCATAAGAGTGAACGTTTCGTTAAATGTAACCAGTTATAGCTGCAGAAAACCGGGTAGTAGTTAACAGTCTAACCTTTCAAATTATTATGTTTTTTGTGAGAAAAATGAAATTTTATTTGCGTTAAt                                                                                                                                                                    <  2:851030/246‑1 (MQ=255)                                                                     ttGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATc                                                                                                                                                                   >  2:697064/1‑251 (MQ=255)                                                                        aCATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCAGCTCTTCAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATATAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATaacc                                                                                                                                                                >  1:98299/1‑251 (MQ=255)                                                                          aTTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATcaccac                                                                                                                                                              <  1:726859/251‑1 (MQ=255)                                                                             tttAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATg                                                                                                                                                                                                         <  1:760743/205‑1 (MQ=255)                                                                             tttAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATg                                                                                                                                                                                                         >  2:760743/1‑205 (MQ=255)                                                                              ttAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAATCCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTGTATGATTTGTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAg                                                                                                                                                           <  1:871911/250‑1 (MQ=255)                                                                                        tttAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGc                                                                                                                                                >  2:331426/1‑251 (MQ=255)                                                                                                        ggTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAAc                                                                                                                                <  1:331426/251‑1 (MQ=255)                                                                                                         gTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTc                                                                                                                                                                                                                             <  1:441981/157‑1 (MQ=255)                                                                                                         gTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTc                                                                                                                                                                                                                             >  2:441981/1‑157 (MQ=255)                                                                                                              tAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGaa                                                                                                                           <  1:264225/250‑1 (MQ=255)                                                                                                              tAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATGTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGa                                                                                                                            <  2:299806/249‑1 (MQ=255)                                                                                                                gcgcCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGACTCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTAGTTGCTTTAATCACCACCAGATGATGTTCGCCATCCAGGGCTGGAACCTGAAGtt                                                                                                                        <  1:97986/251‑1 (MQ=255)                                                                                                                     gATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAACACAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAAcc                                                                                                                   >  2:412527/1‑251 (MQ=255)                                                                                                                            aGCAGACTGATATTTTCACTAATGAATTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTAAATTTTTTATGATTTTTTTGATAAAAATTAACTTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACTTGAAGTTTAACCACTGAtt                                                                                                            >  2:754564/1‑251 (MQ=255)                                                                                                                                         tttCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATAttc                                                                                               >  1:465266/1‑251 (MQ=255)                                                                                                                                             aCTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCg                                                                                           >  1:573428/1‑251 (MQ=255)                                                                                                                                              cTAATGACTTATTTTCTGCTTACCAAAAAAAACAACGTTATCTTGTTGATGCAAAAGAGTGAACATGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATACAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTACCCACTGATTCGACCTGCTATTCTTCgg                                                                                          >  2:558482/1‑251 (MQ=255)                                                                                                                                               tAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCggg                                                                                         >  2:522231/1‑251 (MQ=255)                                                                                                                                                aaTGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGc                                                                                        >  1:182885/1‑251 (MQ=255)                                                                                                                                                 aTGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTCTCTTGTTGATGCACAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGACAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGc                                                                                        >  2:426530/1‑250 (MQ=255)                                                                                                                                                                  tACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGATTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCt                                                                      >  1:826868/1‑251 (MQ=255)                                                                                                                                                                      aaaaaaaGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCg                                                                  >  2:889586/1‑251 (MQ=255)                                                                                                                                                                        aaaaaGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTATCCGGTCAATTTTGTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCATGGCTGGATCCTGAAGTTTAACCACTGATTCGACCTGATAtt                                                                                                <  2:797306/219‑1 (MQ=255)                                                                                                                                                                        aaaaaGCCACGTTATCTTGTGGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATAtt                                                                                                >  1:797306/1‑219 (MQ=255)                                                                                                                                                                          aaaGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCAt                                                              >  1:898642/1‑251 (MQ=255)                                                                                                                                                                              ccACGTTATCTTGTTGATGCAACAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGc                                                          >  1:238984/1‑251 (MQ=255)                                                                                                                                                                               cACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGcc                                                         >  1:620312/1‑251 (MQ=255)                                                                                                                                                                                     aTCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGAt                                                                                                                                                                                              >  2:401588/1‑112 (MQ=255)                                                                                                                                                                                     aTCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGAt                                                                                                                                                                                              <  1:401588/112‑1 (MQ=255)                                                                                                                                                                                        ttgttgATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAgcg                                                >  1:555689/1‑251 (MQ=255)                                                                                                                                                                                         tgttgATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCa                                                   <  2:303880/247‑1 (MQ=255)                                                                                                                                                                                         tgttgATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAg                                                  <  2:620312/248‑1 (MQ=255)                                                                                                                                                                                          gttgATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGcgcg                                              >  1:3205/1‑251 (MQ=255)                                                                                                                                                                                              aTGCAAAAGAGTGCACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAAACGGTCACTTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTATCCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGt                                             >  2:860131/1‑248 (MQ=255)                                                                                                                                                                                                gCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGaa                                         <  2:238984/250‑1 (MQ=255)                                                                                                                                                                                                   aaaGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACgg                                     <  1:673670/251‑1 (MQ=255)                                                                                                                                                                                                        gTGAACGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTg                                <  1:465576/251‑1 (MQ=255)                                                                                                                                                                                                           aaCGTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATCTTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTc                             >  2:155748/1‑251 (MQ=255)                                                                                                                                                                                                              gTGGCGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCAcc                          <  1:889586/251‑1 (MQ=255)                                                                                                                                                                                                                  cGTTAAATGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGATAACAGACTAACCGGTCAATTATTTATGATTTTTTTGAAAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGACGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAgg                       >  1:863292/1‑250 (MQ=255)                                                                                                                                                                                                                       aaTGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGAtg                 >  1:655793/1‑251 (MQ=255)                                                                                                                                                                                                                        aTGTAACCAGTTATATCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGAtgg                >  1:309510/1‑251 (MQ=255)                                                                                                                                                                                                                                      atCAGCAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGGCACCAGCTCAc  <  1:219964/251‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      TTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTAATAATGTTTTAACAGCCAATGATGGTTCTTAGCGCCGATTTTTAGCAGACTGATATTTTCACTAATGACTTATTTTCTGCTTACCAAAAAAAGCCACGTTATCTTGTTGATGCAAAAGAGTGAACGTGGCGTTAAATGTAACCAGTTATATCAGTAGAAAACCTGGTTGTTGTTAACAGTCTAACCGGTCAATTTTTTATGATTTTTTTGATAAAAATTAAATTTTATTTGCTTTAATCACCACCAGATGACGTTCGCCATCCAGGGCTGGAACCTGAAGTTTAACCACTGATTCGACCTGATATTCTTCGGGCAACAAAGCGATTTCATCTTCCGGCATTTGCCCTTTCAGCGCGTAGAAACGGCCTTGCTCACCAGGAAGATGGTGGCACCAGCTCAC  >  NC_000913/3922760‑3923239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑