| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,590,430 | T→C | intergenic (‑429/+424) | ydeT ← / ← hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,590,430 | 0 | T | C | 98.9% | 320.4 / ‑3.9 | 87 | intergenic (‑429/+424) | ydeT/hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (47/39); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
CGAACAAGGGAAGTGTCAGGAAAGGTCAAGAGCTACCAATGGTTAATATGGCTATAAATCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTTATTAAAGCTGTCCGACAGACTTTCTTAACCTGGTAATATCTCTCTTGGGTGACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAA > NC_000913/1590203‑1590674 | gtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGGAACCGACagcatagctggct > 2:796416‑M2/198‑245 (MQ=255) aggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCtgt > 2:591358‑M2/196‑251 (MQ=255) aggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgatgcgtcgtttgagtaaacagtacgaacagataaacggtgattataatcaacctggctgtgagtaggtatagttcccatggccgCGAATATCCCCGACGGAAATGGGATAGCTTCCGGAACCGACAACATAAACTGCtgt < 2:315566‑M2/56‑1 (MQ=255) aagtttgctggcaaccccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCGGCTGTGGTGACATCg < 2:48730‑M2/66‑1 (MQ=255) gcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGt < 2:25335‑M2/67‑1 (MQ=255) gcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGt > 1:25335‑M2/176‑242 (MQ=255) ggTCAAGAGCTACCAATGGTTAATATGGCTATAAATCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTTATTAAAGCTGTCCGACAGACTTTCTTAACCTGGTAATATCTCTCTTGGGTGACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcatt < 2:652725/251‑1 (MQ=255) caacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCTTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcatt < 1:481122‑M2/77‑1 (MQ=255) caacaccggttaacagaatgcgcttaccagaaagaaaacccatagctgtaatccttatttttgttgcttgttgtgcctgaaaatcaggctattcgtcgttttagtaaacagtacggacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTATCCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcatt < 2:620219‑M2/77‑1 (MQ=255) aacaccggttaccagaatgcgcttaccggaacgaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGCCAGCATAGGCTGCTGTGGTGACATCGTAATGttcattc > 2:368471‑M2/174‑251 (MQ=255) aacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcattc < 1:793081‑M2/78‑1 (MQ=255) aacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcattc > 1:212498‑M2/174‑251 (MQ=255) cggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCAt < 1:19596‑M2/83‑1 (MQ=255) ccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCg > 1:295290‑M2/163‑251 (MQ=255) cgcttaccggaaagaaaacccatagctttaatccttattgtttatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCAGTCAGCATCTGTCGCCTGACtt < 2:934887‑M2/97‑1 (MQ=255) cggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTg > 1:320891‑M2/148‑249 (MQ=255) aaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACg > 2:945239‑M2/145‑251 (MQ=255) aaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGc > 1:837624‑M2/141‑251 (MQ=255) aaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGcc > 2:534921‑M2/140‑251 (MQ=255) aacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGcc > 1:453170‑M2/139‑250 (MQ=255) aacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGcc > 1:326312‑M2/139‑250 (MQ=255) acccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCAt > 2:214227‑M2/138‑251 (MQ=255) catagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTc < 1:214227‑M2/117‑1 (MQ=255) agctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCTTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGa < 1:591358‑M2/120‑1 (MQ=255) tttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATAc > 2:409721‑M2/129‑251 (MQ=255) taatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCg > 2:220942‑M2/127‑251 (MQ=255) tccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCgg > 1:782665‑M2/124‑249 (MQ=255) tattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtatgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGCCGTAGCCATTTCTGATACCGGAGTgg > 2:85737‑M2/120‑250 (MQ=255) tattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTg < 2:33947‑M2/130‑1 (MQ=255) tgttgatgaatgtagtgcctgacacacagccgattcgacgttttagtaaccagtacgaacagctaaacggttattataattaccctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGTACTc > 2:888609‑M2/117‑251 (MQ=255) tgtagatgctggttgtgcctgaaaatcaggcgtttcgtcgtttgagtaaccagtacgaacagataaacggttataataatcaacctggctgtgaggagctatagttgccaggtccgCGCATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACt < 2:35810‑M2/134‑1 (MQ=255) gcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgggagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTccc < 2:657905‑M2/141‑1 (MQ=255) cttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGc > 2:758507‑M2/109‑251 (MQ=255) gttgtgactgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCtt < 1:796416‑M2/145‑1 (MQ=255) gtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATc > 1:526177‑M2/103‑251 (MQ=255) gccttaaaatcaggcgattcgtcgttgtagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCg < 2:326312‑M2/151‑1 (MQ=255) gcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTc > 1:193672‑M2/101‑198 (MQ=255) gcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTc < 2:193672‑M2/98‑1 (MQ=255) gcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATcc < 1:220942‑M2/150‑1 (MQ=255) gaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTcc < 1:368471‑M2/154‑1 (MQ=255) gaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCt > 2:507774‑M2/97‑251 (MQ=255) atcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTaa > 2:214910‑M2/93‑250 (MQ=255) caggcgattcgtcgttttagaaaacagtacgaacagctaaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCCTTCCCGCTTGATCCGTCCTTAAAt > 2:482868‑M2/91‑250 (MQ=255) cgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgggagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTa < 2:212498‑M2/165‑1 (MQ=255) gtcgttttagtaaaccgtacgaacagatacacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCAGCTTGATCCGTCCTTAAATAAGTAACAGc > 2:565878‑M2/81‑250 (MQ=255) cgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAc < 2:837624‑M2/172‑1 (MQ=255) ttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCt < 2:210811‑M2/85‑1 (MQ=255) ttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCt > 1:210811‑M2/77‑161 (MQ=255) aacagtccgaacagataaacggttattctaatcaacctcgctgtgagtagctatagttgccagctccgCGAATATTCCCGACTGAAGTGGGATAGCTTCCGTAACCGACAGCTTAGGCTGCTGTGGTGACATCGTAATGTTCCTTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGAAACagcaccctctcgcgtt > 2:117109‑M2/69‑245 (MQ=255) agtacgaacagataaacggttattatactcaacctggctgtgactagctatagttgccaggtacgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATc > 1:359235‑M2/66‑149 (MQ=255) agtacgaacagataaacggtgattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAAGGGGATAGCGTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATGCAGCATc < 2:359235‑M2/84‑1 (MQ=255) gtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCg < 1:117109‑M2/187‑1 (MQ=255) cgaaccgataaacgcttcttctaatccacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTAt > 1:286228‑M2/62‑251 (MQ=255) gaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATg > 1:198576‑M2/61‑251 (MQ=255) aacagataaacggttattataatcagcctggctgtgagtagctatagttgccaggtccgCGAATATGCCCGACTGAAATGGGATAGCTTCCGTAACCTACAGCATAGGCTGCTGTGGTGTCATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCTCTTGTTCCGTCCTTAAATAAGTAACAGCACCCTCTTGTGTTTTCTTAtga < 2:426697‑M2/192‑2 (MQ=255) acagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCa < 2:198576‑M2/193‑1 (MQ=255) taaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTc < 2:727843‑M2/135‑1 (MQ=255) taaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTc > 1:727843‑M2/54‑188 (MQ=255) aaacggttcgtataatcaacctggatgtgcgtagctatcgttgccaggcccgCGAATATTACCGACCGAAATGGGATAGCTTCCGTAACAGACAGCATAGGATGATGTGGTGACATCGTACTGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCt > 2:866987‑M2/53‑251 (MQ=255) aaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCATCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAAGAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTc < 1:888609‑M2/198‑1 (MQ=255) aatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGAGCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGacac < 1:482868‑M2/212‑1 (MQ=255) atcaaccagactgagaatagctatagttgcccggtccgCGAATATCCCCTACTGAAATGGGATAGCTTCCGTAACCGACAGAAAAGGCTGCTGCGGTGACATCGTAATGTTCATTCCGCATATGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACt > 2:62910‑M2/39‑251 (MQ=255) aacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgcg > 1:491957‑M2/36‑251 (MQ=255) cctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGct < 1:214910‑M2/218‑1 (MQ=255) tggctgtgagtagctatagttgccaggtccgCGAATACTCCCGACTGCACTCGGATAGCTTCCGTAACCGACAGCCTAGGCTGCTGTGGCGAAATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGctct > 1:929041‑M2/32‑251 (MQ=255) agctatagttgccaggtccgCGAATATTCCCGACGGAAATGGGATAGCTTCCGTAACCGACAGCAGAGGCTGCTGTGGTGACATCGTAATGTTCAGTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATGTCTGATGCCGGAGTGTACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCTCCCTCTGGTGTTTTCGGATTCAGTGTCTATGCTACAGACACTGCGCGCTTATCATGGGGc < 2:929041‑M2/231‑1 (MQ=255) tatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAgg > 1:9376‑M2/18‑251 (MQ=255) tgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATa > 2:136218‑M2/12‑250 (MQ=255) gccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAAc < 2:453170‑M2/241‑1 (MQ=255) ccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAAcc < 1:945239‑M2/242‑1 (MQ=255) ggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAgg > 2:697725‑M2/7‑251 (MQ=255) ccGCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCt > 2:55395/1‑250 (MQ=255) ccGCGAAGATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACGTCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGTACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCGCCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACTCTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTa < 1:466501/251‑1 (MQ=255) cgcgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCTGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgcgc < 2:908934/219‑1 (MQ=255) cgcgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCTGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgcgc > 1:908934/1‑219 (MQ=255) cgcgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGCGGTGACATCATAATGTTCATTAAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTAt > 2:928618/1‑251 (MQ=255) cgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTAttt < 2:491957/251‑1 (MQ=255) gAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtc > 1:262102/1‑251 (MQ=255) aaTATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtct < 1:241458/251‑1 (MQ=255) atTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTcc < 1:565878/250‑1 (MQ=255) aCTGAAATGGGATAGATTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGcac > 1:729219/1‑249 (MQ=255) aTGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAAt < 1:758507/251‑1 (MQ=255) ggATAGCTTCCGTAACCGACAGCCTAGGCTGCTGTGGTGCCATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCCGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACCGGCCAATTAt > 2:549526/1‑251 (MQ=255) aTAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATg > 2:365655/1‑250 (MQ=255) aGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAAt < 1:218178/244‑1 (MQ=255) aGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAAt > 2:218178/1‑244 (MQ=255) aGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGaa > 2:112109/1‑250 (MQ=255) | CGAACAAGGGAAGTGTCAGGAAAGGTCAAGAGCTACCAATGGTTAATATGGCTATAAATCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTTATTAAAGCTGTCCGACAGACTTTCTTAACCTGGTAATATCTCTCTTGGGTGACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCATGCACAGGCCAATTATGAA > NC_000913/1590203‑1590674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |