| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,351,171 | Δ239,229 bp | ycjD–ydeT | 230 genes ycjD, sapF, sapD, sapC, sapB, sapA, ymjA, puuP, ymjE, puuA, puuD, puuR, puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH4, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, ynaN, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM, uspF, ompN, micC, ydbK, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD2, insC2, ydbA, insI2, ydbA, pdxI, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, cybB, rydC, ydcA, yncP, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insQ, ydcO, sutR, rlhA, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ortT, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, ydcD, yncO, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddY, digH, gadC, gadB, pqqL, yddB, yddA, yneP, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1351171 | 1590399 | 239229 | 81 [0] | [6] 87 | ycjD–ydeT | ycjD,sapF,sapD,sapC,sapB,sapA,ymjA,puuP,ymjE,puuA,puuD,puuR,puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH4,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD2,insC2,ydbA,insI2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,cybB,rydC,ydcA,yncP,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insQ,ydcO,sutR,rlhA,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,ydcD,yncO,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddY,digH,gadC,gadB,pqqL,yddB,yddA,yneP,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1351170 | 0 (0.000) | 80 (0.720) | 74/474 | 0.2 | 99.4% | intergenic (‑131/+237) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| ? | NC_000913 | 1590400 = | 1 (0.010) | intergenic (‑399/+454) | ydeT/hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA | |||||
CTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGGAGA > NC_000913/1350920‑1351415 | cTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCg > 2:793081/1‑251 (MQ=255) ggTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcg > 2:686257‑M1/1‑249 (MQ=255) gAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatatt < 1:36867‑M1/250‑9 (MQ=255) aTGCCAGTTCAGCGCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTTCCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTTATGCTTGTTGTGCCTGAAAATCAGGCGTTTCGTCGTTTTAGTAAACAGTACGAACAGATAAACTGTTATTATAATCATCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattccc < 2:894366‑M1/251‑12 (MQ=255) cAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaa < 2:368985‑M1/250‑20 (MQ=255) tCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggata < 1:686257‑M1/249‑27 (MQ=255) cgGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTACGcgaatattcccgactgaaatgggatagcttc > 1:620219‑M1/1‑220 (MQ=255) ggTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGCTCCGcgaatattcccgcctgaaatgggatagcttcc > 2:241458‑M1/1‑219 (MQ=255) gTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccg < 1:708676‑M1/251‑34 (MQ=255) gTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccggaaccgacagcatagctggct > 2:796416‑M1/1‑197 (MQ=255) aGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgt > 2:591358‑M1/1‑195 (MQ=255) aGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATGCGTCGTTTGAGTAAACAGTACGAACAGATAAACGGTGATTATAATCAACCTGGCTGTGAGTAGGTATAGTTCCCATGGCCGcgaatatccccgacggaaatgggatagcttccggaaccgacaacataaactgctgt < 2:315566‑M1/251‑57 (MQ=255) aagTTTGCTGGCAACCCCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggcggctgtggtgacatcg < 2:48730‑M1/250‑67 (MQ=255) gCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgt > 1:25335‑M1/1‑175 (MQ=255) gCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgt < 2:25335‑M1/242‑68 (MQ=255) cAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccttaaccgacagcataggctgctgtggtgacatcgtaatgttcatt < 1:481122‑M1/251‑78 (MQ=255) cAACACCGGTTAACAGAATGCGCTTACCAGAAAGAAAACCCATAGCTGTAATCCTTATTTTTGTTGCTTGTTGTGCCTGAAAATCAGGCTATTCGTCGTTTTAGTAAACAGTACGGACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtatccgacagcataggctgctgtggtgacatcgtaatgttcatt < 2:620219‑M1/251‑78 (MQ=255) aaCACCGGTTACCAGAATGCGCTTACCGGAACGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgccagcataggctgctgtggtgacatcgtaatgttcattc > 2:368471‑M1/1‑173 (MQ=255) aaCACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattc < 1:793081‑M1/251‑79 (MQ=255) aaCACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattc > 1:212498‑M1/1‑173 (MQ=255) cGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcat < 1:19596‑M1/251‑84 (MQ=255) ggTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatatt > 2:493009‑M1/1‑167 (MQ=255) ggTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatatt < 1:493009‑M1/175‑9 (MQ=255) ccAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcg > 1:295290‑M1/1‑162 (MQ=255) cgcTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTTATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcagtcagcatctgtcgcctgactt < 2:934887‑M1/251‑98 (MQ=255) cGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattg > 1:320891‑M1/1‑147 (MQ=255) aaagaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacg > 2:945239‑M1/1‑144 (MQ=255) aaaaCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagc > 1:837624‑M1/1‑140 (MQ=255) aaaCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagcc > 2:534921‑M1/1‑139 (MQ=255) aaCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagcc > 1:453170‑M1/1‑138 (MQ=255) aaCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagcc > 1:326312‑M1/1‑138 (MQ=255) aCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccat > 2:214227‑M1/1‑137 (MQ=255) cATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttc < 1:214227‑M1/251‑118 (MQ=255) aGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccttaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctga < 1:591358‑M1/251‑121 (MQ=255) tttAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgatac > 2:409721‑M1/1‑128 (MQ=255) tAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccg > 2:220942‑M1/1‑126 (MQ=255) tCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccgg > 1:782665‑M1/1‑123 (MQ=255) tATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTATGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagccgtagccatttctgataccggagtgg > 2:85737‑M1/1‑119 (MQ=255) tATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtg < 2:33947‑M1/249‑131 (MQ=255) tgttgATGAATGTAGTGCCTGACACACAGCCGATTCGACGTTTTAGTAACCAGTACGAACAGCTAAACGGTTATTATAATTACCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtgtactc > 2:888609‑M1/1‑116 (MQ=255) tgtagatgcTGGTTGTGCCTGAAAATCAGGCGTTTCGTCGTTTGAGTAACCAGTACGAACAGATAAACGGTTATAATAATCAACCTGGCTGTGAGGAGCTATAGTTGCCAGGTCCGcgcatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggact < 2:35810‑M1/246‑135 (MQ=255) gCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGGGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattccc < 2:657905‑M1/250‑142 (MQ=255) cTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgc > 2:758507‑M1/1‑108 (MQ=255) gttgtGACTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgctt < 1:796416‑M1/250‑146 (MQ=255) gtgCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatc > 1:526177‑M1/1‑102 (MQ=255) gCCTTAAAATCAGGCGATTCGTCGTTGTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccg < 2:326312‑M1/251‑152 (MQ=255) gCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatcc < 1:220942‑M1/250‑151 (MQ=255) gCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttc > 1:193672‑M1/1‑100 (MQ=255) gCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttc < 2:193672‑M1/198‑99 (MQ=255) gAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtcct > 2:507774‑M1/1‑96 (MQ=255) gAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtcc < 1:368471‑M1/250‑155 (MQ=255) aTCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaa > 2:214910‑M1/1‑92 (MQ=255) cAGGCGATTCGTCGTTTTAGAAAACAGTACGAACAGCTAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactccttcccgcttgatccgtccttaaat > 2:482868‑M1/1‑90 (MQ=255) cGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGGGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagta < 2:212498‑M1/251‑166 (MQ=255) gtcgtTTTAGTAAACCGTACGAACAGATACACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattccagcttgatccgtccttaaataagtaacagc > 2:565878‑M1/1‑80 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcac < 2:837624‑M1/250‑173 (MQ=255) ttttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatct < 2:210811‑M1/161‑86 (MQ=255) ttttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatct > 1:210811‑M1/1‑76 (MQ=255) aaCAGTCCGAACAGATAAACGGTTATTCTAATCAACCTCGCTGTGAGTAGCTATAGTTGCCAGCTCCGcgaatattcccgactgaagtgggatagcttccgtaaccgacagcttaggctgctgtggtgacatcgtaatgttccttcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagaaacagcaccctctcgcgtt > 2:117109‑M1/1‑68 (MQ=255) aGTACGAACAGATAAACGGTTATTATACTCAACCTGGCTGTGACTAGCTATAGTTGCCAGGTACGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatc > 1:359235‑M1/1‑65 (MQ=255) aGTACGAACAGATAAACGGTGATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaaggggatagcgtccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcatgcagcatc < 2:359235‑M1/149‑85 (MQ=255) gTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcg < 1:117109‑M1/251‑188 (MQ=255) cGAACCGATAAACGCTTCTTCTAATCCACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtat > 1:286228‑M1/1‑61 (MQ=255) gAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatg > 1:198576‑M1/1‑60 (MQ=255) aaCAGATAAACGGTTATTATAATCAGCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatatgcccgactgaaatgggatagcttccgtaacctacagcataggctgctgtggtgtcatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattccctcttgttccgtccttaaataagtaacagcaccctcttgtgttttcttatga < 2:426697‑M1/251‑193 (MQ=255) aCAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgca < 2:198576‑M1/251‑194 (MQ=255) tAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactc > 1:727843‑M1/1‑53 (MQ=255) tAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactc < 2:727843‑M1/188‑136 (MQ=255) aaaCGGTTCGTATAATCAACCTGGATGTGCGTAGCTATCGTTGCCAGGCCCGcgaatattaccgaccgaaatgggatagcttccgtaacagacagcataggatgatgtggtgacatcgtactgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtct > 2:866987‑M1/1‑52 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcatcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaagaagtaacagcaccctctggtgttttcgtatgcagtgtc < 1:888609‑M1/250‑199 (MQ=255) aaTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgagccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacac < 1:482868‑M1/251‑213 (MQ=255) aTCAACCAGACTGAGAATAGCTATAGTTGCCCGGTCCGcgaatatcccctactgaaatgggatagcttccgtaaccgacagaaaaggctgctgcggtgacatcgtaatgttcattccgcatatgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacact > 2:62910‑M1/1‑38 (MQ=255) aaCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcg > 1:491957‑M1/1‑35 (MQ=255) ccTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgct < 1:214910‑M1/251‑219 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatactcccgactgcactcggatagcttccgtaaccgacagcctaggctgctgtggcgaaatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctct > 1:929041‑M1/1‑31 (MQ=255) aGCTATAGTTGCCAGGTCCGcgaatattcccgacggaaatgggatagcttccgtaaccgacagcagaggctgctgtggtgacatcgtaatgttcagtcagcatctgtcgcctgacttcattgagacgtagccatgtctgatgccggagtgtactcattcccgcttgatccgtccttaaataagtaacagctccctctggtgttttcggattcagtgtctatgctacagacactgcgcgcttatcatggggc < 2:929041‑M1/251‑232 (MQ=255) tataGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagg > 1:9376‑M1/1‑17 (MQ=255) tGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaata > 2:136218‑M1/1‑11 (MQ=255) gCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataac < 2:453170‑M1/251‑242 (MQ=255) ccAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataacc < 1:945239‑M1/251‑243 (MQ=255) ggTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccagg > 2:697725‑M1/1‑6 (MQ=255) | CTGGTAGGTGAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGGAGA > NC_000913/1350920‑1351415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |