| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,600,215 | +C | intergenic (‑26/+23) | yjjA ← / ← dnaC | DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,600,214 | 1 | . | C | 97.6% | 284.7 / ‑6.4 | 84 | intergenic (‑25/+24) | yjjA/dnaC | DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC |
| Reads supporting (aligned to +/- strand): ref base . (2/0); major base C (44/36); minor base A (2/0); total (48/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCG‑C‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTGC > NC_000913/4599964‑4600457 | gatgggcgtgcgtgtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCg > 2:218521‑M2/245‑251 (MQ=255)gatgggcgtgcgtgtggtcaccggtatcagtttcggatttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCg > 2:687876‑M2/245‑251 (MQ=255) ggggcgtgcgtgtggccaccggtatcagtttcggttttgtcttctacgtcctggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCg‑cc < 2:809761‑M2/9‑2 (MQ=255) gtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGcc < 1:441468‑M2/20‑1 (MQ=255) ggtccccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcaccccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCa < 1:578853‑M2/21‑1 (MQ=255) ggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAg < 1:202637‑M2/22‑1 (MQ=255) atcagtttgggttttttcttctacgtacgggaccagttcgtcggcccgcttacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAAc < 2:209043‑M2/26‑1 (MQ=255) atcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAAc > 1:209043‑M2/220‑245 (MQ=255) atcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGa < 1:687876‑M2/31‑1 (MQ=255) cagtttgggttttgctttctacgtacgggaccagaccgccggcccgctgacgttggtttatggcaccccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGAtt < 2:534795‑M2/33‑1 (MQ=255) gtttcggttttgtcttctacgtactggaccagatcttcggcccgctgaagatggtttatggcatccagccgatcataggcgcgctgttgccaagcgccagcttcttcttactcagcctgtggctgttcatgagcaaatcgtaaccgaatgaacgcataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGAC‑AGTATACCGCCAGAAACGGGGATTAAt > 1:876982‑M2/216‑251 (MQ=255) ggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATActct > 1:202350‑M2/211‑251 (MQ=255) tcttctacgtactggaccagatcttcggcccgctgcagttggtttatggcatcccgccgatcatcggcgcactgttgccacgcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTg > 2:473494‑M2/204‑251 (MQ=255) ccgtacgggaccagatcttcggccggctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgctgcgttcattcctgaTGTTTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTAcc < 2:899207‑M2/53‑1 (MQ=255) cgtacgggaccagatctccggcccgctgacgtgggtttagggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCg < 2:523172‑M2/55‑1 (MQ=255) ggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACg > 1:160422‑M2/191‑251 (MQ=255) accagatcttcggccctctgccgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctgtattattgttagcaaagtgtgcttcgttcattcccgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGt < 1:17481‑M2/63‑1 (MQ=255) gcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGt > 1:622133‑M2/177‑251 (MQ=255) gcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcagtcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGt < 1:473494‑M2/75‑1 (MQ=255) cccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGtt > 1:609782‑M2/176‑251 (MQ=255) cgctgacgttggtttatggcatcccgccgatcatcggcgaactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgcataaagggagcgaaaactccctttattattgttagcaacgtgtgcttcgttcattcctgtTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTg > 1:552786‑M2/174‑250 (MQ=255) ctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGa > 1:357160‑M2/172‑249 (MQ=255) gacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGAt < 1:730522‑M2/82‑1 (MQ=255) ggtttatggcatcccgccgataatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCAccc > 1:303569‑M2/164‑250 (MQ=255) tatgtcatcccgccgatcatcggcgcacgtttgccaagctccagcttcttattaatcagcctgtggctgttaatgataaaatcgtaaccgaatgaacgaatacagggagcgaaagctccctttattattgttagcaaagtgttcttcgttcattcctgaTGTGTCGCC‑AGTTCACCGTCAGAAACGGGGATTAATACTCTTTACCTGTTTCCCGGCTACGGTAGTTAACCCTGATGAAGATCACCCACaa < 2:164928‑M2/91‑1 (MQ=255) ccagccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTAGACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTAcc < 1:416779‑M2/100‑1 (MQ=255) cgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCt < 1:320024‑M2/67‑1 (MQ=255) cgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCt > 2:320024‑M2/150‑216 (MQ=255) gatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGgcg > 1:234483‑M2/146‑251 (MQ=255) catcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCAt < 2:830872‑M2/109‑1 (MQ=255) ctgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATc > 2:549745‑M2/133‑251 (MQ=255) gccaagcgccagcttcgtcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttatgattggtagcaaagtgtgcttcgttcattcctgaTGTGTCg‑cc < 1:855751‑M2/9‑2 (MQ=255) ccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑ATTATACCGCCAGAAACGTGGATTAATACTCTTTACCTGTGACCCTGCTACGGTAGCTATCCCAg < 1:360451‑M2/74‑1 (MQ=255) ccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAg > 2:360451‑M2/127‑200 (MQ=255) ccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGccc > 1:269013‑M2/120‑250 (MQ=255) cagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGAGTAATACTCTTTACCTGTTACCCGGCTACGGTAGGTATCCCAGTTGAAGATCACCCACAAACTGTTTCCCAGGCGCATACGGGCCATCTCGCGTTCGCCCAg < 2:479895‑M2/133‑1 (MQ=255) gcttcttcttaatcagcctgtggctgttaatgagaaaatcgtacccgaatgaacgaattaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATCCGGTCCATCACGCGTTCGCCCAGc > 2:410783‑M2/117‑250 (MQ=255) gcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCa < 1:567463‑M2/135‑1 (MQ=255) cttcttaatcagcctgtggatgctaatgccaaaatcgtaaccgaatgaacgaatacagggagcgaaagctccctttattattgttagaaaagagtgcttcgttgattcctgaTGTGTAGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGCAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCTTCCAGCGttcgcccacaacctt > 2:55556‑M2/113‑244 (MQ=255) ttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATc > 1:309137‑M2/112‑194 (MQ=255) ttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGGTACCCGGCTACGGTAGCTATCCCAGTTGAAGATc < 2:309137‑M2/83‑1 (MQ=255) atcagccggtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgtgcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTTTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCAtc < 2:297668‑M2/146‑1 (MQ=255) agcctgtggctgttaatgagaaaatcgtaaccgaattaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgctgcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCCCCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCatctca < 2:288139‑M2/149‑2 (MQ=255) gtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCat < 2:160422‑M2/154‑1 (MQ=255) gtggctgttaatgagaaaagcgtaaccgaaggaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTGGAAGATCACCCACAAACTGTTTCCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTGGGTCATCTCTTCCat < 2:609782‑M2/154‑1 (MQ=255) tgttaatgagaaactcgtaaccgaatgaacgaataaagggagcgacagatccctttattattgttcgcaaagtgtgcttcgttcattcctgaTGTGTCG‑CTCGTATACCGCCAGAACCGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCCGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATCCGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTAc > 1:565555‑M2/93‑251 (MQ=255) taatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTg < 1:410783‑M2/161‑1 (MQ=255) tgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTgg > 1:917035‑M2/87‑251 (MQ=255) agaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCAAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTc > 1:815775‑M2/85‑251 (MQ=255) gaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCa < 1:77217‑M2/168‑1 (MQ=255) aatcgtaaccgaatgaacgaataaagggcgcgcaagctccctttattcttgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGCTTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACACACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCACCTTGGTCATCTCTTCCATATTACTGTTGGTCAGc > 2:366493‑M2/81‑250 (MQ=255) atcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCAt > 1:33421‑M2/80‑251 (MQ=255) atcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCAt > 2:68626‑M2/80‑251 (MQ=255) cgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATcc > 1:811732‑M2/78‑251 (MQ=255) aaccgaatgaacgaatacagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCgg > 1:735830‑M2/75‑251 (MQ=255) atgaacgaataaagggagctaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGc < 2:269013‑M2/183‑1 (MQ=255) gaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑CGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGc > 2:143432‑M2/63‑245 (MQ=255) gaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGc < 1:143432‑M2/183‑1 (MQ=255) aagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGgaaga > 2:518500‑M2/58‑250 (MQ=255) agggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGCTCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGgaaga > 2:368829‑M2/57‑249 (MQ=255) gagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgc > 1:730271‑M2/54‑251 (MQ=255) agcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcg > 2:701026‑M2/53‑251 (MQ=255) cgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcggc < 1:218521‑M2/201‑1 (MQ=255) gaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcggcg > 2:272454‑M2/50‑251 (MQ=255) gaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcggcg > 1:355635‑M2/50‑251 (MQ=255) agctccctttattattgttagcaaagtgtgcttcggtcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCGCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATc < 2:702367‑M2/205‑1 (MQ=255) gctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGTATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATcg < 1:366493‑M2/206‑1 (MQ=255) tccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATcgac > 1:338070‑M2/44‑251 (MQ=255) ccctttattattttgagcaaagtgtgcctctttcatttcggaTGTGTCGCC‑AGTATACCGCCAAAAACTGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACTCAGGCGCATACGGTCCATCACGCTTTCGCCGAGCAACTTGTTCATCTCTTCCATATTCCTGTTGGTCATCATCCCGGTTGGGCGTTTGTAAGAAGAGCGGCGATcgacg < 1:414914‑M2/209‑1 (MQ=255) ccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTAccc > 1:32708‑M2/43‑143 (MQ=255) ccctgtattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACTGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTTccc < 2:32708‑M2/101‑1 (MQ=255) attgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGGTCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAAATTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtg > 2:568869‑M2/34‑251 (MQ=255) ttgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCAAAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtg > 2:617113‑M2/33‑250 (MQ=255) tgttagcacagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTCATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtgat > 2:116216‑M2/32‑251 (MQ=255) tgttagcaaagtgtggttcgttcattcatgaTGTGTCGAC‑AGTATAACGCCAGAAACGGGGCTTAATACTCTTTACCTGTTACCAGGCTACGGTAGCTCTCCCAGTTGAAGATCACCCACAAACTGTTCCCCAGGAGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCACGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGTCGGTCTGGTtgat > 2:744768‑M2/32‑251 (MQ=255) gttagcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtgatg > 1:18283‑M2/31‑251 (MQ=255) tagcaaagtgtgattggttccttcctgaTGTGTCGCC‑AGTATACCGCCAGAACCGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCCTATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTgatgat > 2:111804‑M2/29‑251 (MQ=255) agcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATc < 2:735830‑M2/224‑1 (MQ=255) gcaaagtgtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGAtcc > 1:430038‑M2/27‑250 (MQ=255) aaattgtgcttcgtgcattccggaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTGTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGGCCAGCTCGCGTTCGCCCAGCATCTTGGTCATCTCTTCCATATTGCTGTTTGTCAGCATCTCGGTGGGGCGTTTGGGAGAAGAGCGGCCATCGACGATCTGGTTTATGATCACt < 2:565555‑M2/227‑1 (MQ=255) gtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGAt < 2:519074‑M2/204‑1 (MQ=255) gtgcttcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGAt > 1:519074‑M2/20‑223 (MQ=255) tcgttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTGGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTAtt > 2:705254‑M2/15‑251 (MQ=255) ttcattcctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCg > 2:316871‑M2/12‑251 (MQ=255) cctgaTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCgg < 1:116216‑M2/246‑1 (MQ=255) aTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGCCGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTg > 1:162668‑M2/2‑251 (MQ=255) aTGTGTCGCC‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTg > 1:56054‑M2/2‑251 (MQ=255) gtgtCG‑CCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCCCTTTTTCGTATTTCGATTCGGTCTGc > 2:695023/1‑250 (MQ=255) | CGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCG‑C‑AGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTGC > NC_000913/4599964‑4600457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |