| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,104,554 | T→C | Y141C (TAC→TGC) | cpxA ← | sensor histidine kinase CpxA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,104,554 | 0 | T | C | 98.8% | 293.4 / NA | 80 | Y141C (TAC→TGC) | cpxA | sensor histidine kinase CpxA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (46/33); minor base A (1/0); total (47/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GCGGCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGTAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATC > NC_000913/4104314‑4104798 | gCGGCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGTCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGGAATTTAATGAAATCGGATGGAGTACTTCTGGCCGGACGAAGCAGATAAAGTGGGCAATTATCTTc < 2:227001/251‑1 (MQ=255) ggCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGc > 1:149028/1‑251 (MQ=255) gaaaGGACTTCCTGTGGCCCCGCTTCCAGTTCCGGGTCCTGGCGTGCGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCAGGTTTTGCCAGACGCCAGGCAAACCACAACAGCAGCGGCGTACTGACCAAAATGGGGACAATCAGCAGTAATAGCGGGCGGGCAAACCGTAAGGTAATGAAATCGGTTTGAGAACTGCTGGCCGGACGAATCAGATAAAGATGGCAATTTTCTTCGcc > 2:213021/3‑251 (MQ=255) gCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGcc > 1:91651/1‑251 (MQ=255) gCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGcc > 2:50828/1‑251 (MQ=255) cTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTACGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCCGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAACTCGGATTGAGAACTGCTGGCCGGCCGAATCAGATAAAGTTGGCAATAATCTTCGCCATCACGCACgg > 2:70543/1‑251 (MQ=255) ttCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGtt > 2:127799/1‑251 (MQ=255) ccGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCCGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTcc > 1:31727/1‑251 (MQ=255) ccGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTcc < 1:375944/251‑1 (MQ=255) gggTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTAGCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCAc < 1:50828/251‑1 (MQ=255) ggTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCAcg < 1:25770/251‑1 (MQ=255) tAAGTTTCCCGGGGCAACTTCATCGGCAGCGTTGTTCAGCTTACGCGCCGGTGTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGGTAACGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGAGAAAGTTGGCAATTATCTTCGCCAGCACGCACGGAGAACGTACCGACCAGTTCCACGCTGCCATAc < 2:80943/250‑1 (MQ=255) gTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACtttt < 1:364687/251‑1 (MQ=255) ttCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGCACAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATCCTTTttc > 2:340010/1‑251 (MQ=255) tCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGCAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTttct > 2:132821/1‑251 (MQ=255) gggCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGTAGGACGGACCGACCAATTCCACGCGGTCATACTTTTTCTTCTg < 1:413029/250‑1 (MQ=255) gggCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTg < 1:264097/250‑1 (MQ=255) gggCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGc > 1:394384/1‑251 (MQ=255) gCAACTTCATCGGCAGCGTTTTTCAGCGTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCgg < 2:261943/251‑1 (MQ=255) aCTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGACAGACTCCAGGCCAACCACAACAGCAGCGGCGAACTAACCAACATGGCGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCGGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACAGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGgatg > 1:462063/1‑251 (MQ=255) cATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATc < 1:132821/250‑1 (MQ=255) cAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGtt > 1:228334/1‑250 (MQ=255) gCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATc < 1:255847/251‑1 (MQ=255) cGTTTTTCAGCTTACGCGCCGGTGTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATCGTGACAATCAGCAGTAAGAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTTGCCGGACGAATCAGATAAAGTTGGCAATTAGCTTCGCCATCACGCACGGAGAACGGACCTACCAGTTCCACGCGTCCATACTGGTTCCTCTGCGTATGATCGGCGTTATCg < 2:462063/251‑1 (MQ=255) ttttCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTTAGAACTGCTGGCCGGACGAAGCAGATAAAGTTTGCAATTATCGTCGCCATCACGCTCGTAGAACGGACCGACCAGTTCCTCGCGGCCATACTTTTTCTGCTGCGGATGATCGGCGTTATCGGc < 1:174843/250‑1 (MQ=255) ttttCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGc < 2:256945/250‑1 (MQ=255) ttCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTg > 1:201207/1‑251 (MQ=255) cAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGAc > 1:25939/1‑251 (MQ=255) aCGCGCCGGTTTTGCCAGACTCCATGCCAACCACAACAGCAGCGGCGTACTGACCAACAGGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAAGCAGATAAATGTGGCAATTATCTTCGCCATCACGCACGGAGAACGTACCGACCAGTTCCACGCGGCCATACTTTTTCGTCTGCGGATTATCGGCGTTATCGGCCTGACCAATa < 2:232363/250‑1 (MQ=255) cgcgCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTAGCGGCCTGACCAATaaa < 1:341090/251‑1 (MQ=255) ccGGTTTTGCCAGACGCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAAGGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTAGCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTAGCGGCCTGACCAATAAAGTTa < 2:407517/251‑1 (MQ=255) gTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCACACAGTAAGTTACTGACATCGGATTGAGAACTGCTGGCCGGACGAATCAGATCAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCTGCCATACTTTTTCTTCTGCGGATACTCGGCGTTATCCGCCTTCCCAATAACGTTACgc > 2:132531/1‑250 (MQ=255) gTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGAGTTATCGGCCTGACCAATAAAGTTACg > 1:457826/1‑250 (MQ=255) ccAGACTCCAGGCCCCCCAAAACAGCAGCGGCGTACTGCCCAACATGGCGACAATCCGCAGTAATAGCGGGCGGTCCAACAGCAAGATAATGAAATCGGACTGAGAACCGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGCCCCTACTTTTTCTTCTGCGGACGATCGGCGTTATCGGCTAGACCAATACAGTTACGAATGAtt > 2:52267/1‑250 (MQ=255) cAGACTCCAGGCCAAACACAACAGCAGAGGCGTACTGACCACCATGGTGCCAATCAGCAGTAATAGCGGGCGGTCAACCAGTAAGTTAATGAACTCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATCATCGGCGTTATCGGCCTGACCAATAAAGTTACGacggctct > 2:474860/1‑244 (MQ=255) aCTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGc > 2:110926/1‑250 (MQ=255) ccAGGCCAACCACAACAGAAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGGTACTGAAATCGGATTGAGAACTGCTGGACGGACGAATCAGATAAAGTTGGCCATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGAGGCCATACTTTTTCTTCTGCGGATGCTCGGCGGTAACGGCCTGACCAATACAGTTaggactggacagcattt > 2:136751/1‑235 (MQ=255) gCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCt < 1:482501/251‑1 (MQ=255) cacaACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTc < 2:394384/251‑1 (MQ=255) acaGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGGTACGAATGATCTGCATTTCGCTGCGTTCAgcg < 2:228334/251‑1 (MQ=255) ggcgTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACCGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTa > 2:326845/1‑192 (MQ=255) ggcgTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTc > 1:209689/1‑239 (MQ=255) ggcgTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTAGCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTc < 2:209689/239‑1 (MQ=255) ggcgTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGGTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTa < 1:326845/192‑1 (MQ=255) ggTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCAcgc < 2:31727/250‑1 (MQ=255) cgTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTGCAGCGCCGATCAcgc < 1:70543/251‑1 (MQ=255) aCTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGc > 1:94893/1‑251 (MQ=255) aCTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGc > 1:82270/1‑251 (MQ=255) gACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAAGCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCtt < 2:149028/251‑1 (MQ=255) aaCATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATc > 1:348579/1‑237 (MQ=255) aaCATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATc < 2:348579/237‑1 (MQ=255) gTGACAATCAGCAGTCATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGACATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGGTCTGAGCCGATCACGCGGCCTTCggtggttac > 2:381273/1‑248 (MQ=255) agcagTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACa > 1:377663/1‑250 (MQ=255) gcagTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACaaa < 2:82270/251‑1 (MQ=255) gTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGc > 1:303208/1‑251 (MQ=255) aTAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGACCACTGCTGGCCAGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGACTGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGATGt > 1:199128/1‑251 (MQ=255) aGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCAACACGCACGGAGAACGGACCGACCAGTCCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCGGACCAATAAAGTTACGAATGATCTGCATTTCGCGGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTc < 2:331231/250‑1 (MQ=255) gggcggTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTgg > 1:379658/1‑251 (MQ=255) cAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATCACGTTCCGAATGATCTGCATTTCGCTGCGTTCAGCGCCGCTCACGCGGCCTTCGGTGGTCACCAATCACAAACGCTGTCCTGGCGGTGcc > 2:103529/1‑251 (MQ=255) tAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTAt > 1:272093/1‑251 (MQ=255) aaaTCGGATTGAGCACTGCTGGCCGGACGACTCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTCCGAATGATCTGCCTTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACCAACGCTGTCCTGGCGGTGCCCACTTTTCCATCGcccc > 2:458399/1‑250 (MQ=255) ggATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGCTCCACGCGGCCCTACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATCACAAACGCTGTCCCGGCGGTGCCCACTTATCAATCCCCCGGAAc > 1:22420/1‑250 (MQ=255) gATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAg < 2:379658/251‑1 (MQ=255) tGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGAc < 2:91651/250‑1 (MQ=255) gagaACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCAAGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGGGCCCACTCATCAATCGCCCGGAACAGAcgc > 2:252564/1‑251 (MQ=255) agaACTGCTGGCCGGACGAATCAGATAAAGTTGTCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCCCGCGGCCTTCGGGGGTCGCCAATAACAAACGCTGTCCGGGCGGTGCCCACTTATCAATCGCCCGGAACAGAcgcc < 2:134550/251‑1 (MQ=255) gaACTGCTGGCCGGACGAATCAGATAAATTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAAGAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGc < 2:299633/181‑1 (MQ=255) gaACTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCCTCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATCAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGc > 1:299633/1‑181 (MQ=255) aaCTGCTGGCCGGAAGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTCTCAATCGCCCGGAACAGAcgccgc > 1:213292/1‑251 (MQ=255) aCTGCTGGCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACgccgcc > 1:6871/1‑251 (MQ=255) tgGCCGGACGCATCAGATAAAGTTGGACATTATCTTCGCCATCACGCACGGAGAACGGACCGAACAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATACAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGGGGTCACCAATAACAAACGCTGTCCTGGCGGAGCCCACTTATCCATCGCCCGGAACAGACGCCGccacccc > 2:192312/1‑249 (MQ=255) ggCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCcaccacc > 1:172864/1‑250 (MQ=255) ggCCGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACAGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCGGACCAATACAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGGGCCCCCTTATCAATACCCCGGAACAGACGCCGCccccacc > 2:40388/1‑250 (MQ=255) ccGGACGAATCCGATAACGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCATTAAAGTTCCGAATGATCTGAATTTAGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGCCCTGGAGGTGACCACCTATCTATCACCCCGAACCGCCGCCGCCACGACAtc > 2:294360/1‑250 (MQ=255) ccGGACGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCCTACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGCCGCCGCcaccacctt > 2:181110/1‑248 (MQ=255) aCGAATCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAAt > 1:186127/1‑251 (MQ=255) aTCAGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTCTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGtt > 2:3029/1‑251 (MQ=255) aGATAAAGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTggg > 1:278716/1‑251 (MQ=255) aaaGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCgg < 2:26056/250‑1 (MQ=255) aGTTGGCAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATAGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATc > 1:344998/1‑251 (MQ=255) | GCGGCAAGGAATTCCTGTGGCCCCGCTTCCAGTTCCGGGTGCTGGCGTAAGTTTCCCTGGGCAACTTCATCGGCAGCGTTTTTCAGCTTACGCGCCGGTTTTGCCAGACTCCAGGCCAACCACAACAGCAGCGGCGTACTGACCAACATGGTGACAATCAGCAGTAATAGCGGGCGGTCAAACAGTAAGTTAATGAAATCGGATTGAGAACTGCTGGCCGGACGAATCAGATAAAGTTGGTAATTATCTTCGCCATCACGCACGGAGAACGGACCGACCAGTTCCACGCGGCCATACTTTTTCTTCTGCGGATGATCGGCGTTATCGGCCTGACCAATAAAGTTACGAATGATCTGCATTTCGCTGCGTTCAGCGCCGATCACGCGGCCTTCGGTGGTCACCAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATC > NC_000913/4104314‑4104798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |