Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,068,171 | 0 | G | A | 47.1% | 7.1 / 66.3 | 51 | intergenic (‑91/+2) | yggE/argO | DUF541 domain‑containing protein YggE/L‑arginine exporter |
Reads supporting (aligned to +/- strand): ref base G (10/17); new base A (10/14); total (20/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.80e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: E-value score below prediction cutoff. | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CCACGTTAACTTCAATCGCAAGAGTGGCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCC > NC_000913/3067921‑3068410 | ccACGTTAACTTCAATCGCAAGAGTGGCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCATGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAgcg < 2:448839/251‑1 (MQ=255) tCAATCGCAAGAGTGGAAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAAc > 1:184056/1‑251 (MQ=255) cAAGAGTGGCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCtt < 1:177405/251‑1 (MQ=255) gTGGCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc > 2:389690/1‑250 (MQ=255) ggCAATGTCTGGCCCCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATg < 2:184056/251‑1 (MQ=255) gCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGTCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATg > 2:464271/1‑250 (MQ=255) cTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCCTCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATAc > 1:155723/1‑251 (MQ=255) ggCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGTCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATAc < 1:464271/249‑1 (MQ=255) cACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGtc > 1:280433/1‑251 (MQ=255) cACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGGTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGtc < 2:238297/251‑1 (MQ=255) ccGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGGTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCTCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTTTGCATGAGCAATACCGtctc < 1:174956/251‑1 (MQ=255) cATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCg > 1:87018/1‑251 (MQ=255) aTCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGc > 2:152167/1‑251 (MQ=255) aTCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGc > 1:150312/1‑251 (MQ=255) aCGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGc > 1:266828/1‑251 (MQ=255) tGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCa < 1:346797/250‑1 (MQ=255) gTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCa < 1:465361/251‑1 (MQ=255) aCCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAAt < 1:352148/251‑1 (MQ=255) cGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACGTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCCCGCCAGCTGCAAGGCAATaa < 2:155723/251‑1 (MQ=255) ggTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAAcc > 1:427409/1‑250 (MQ=255) gTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATcccc > 1:46170/1‑250 (MQ=255) ccATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGATGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCGATCTGAACAAGGCTTGTGCATGTGCAAGACCTTCTTTCGGCGGCTGTAATGCAATAATCCACATAGCTCATCCcac < 2:459569/250‑1 (MQ=255) cGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAg < 1:256913/251‑1 (MQ=255) cAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGAtt < 2:266828/251‑1 (MQ=255) cAATTCGTTAGAATGCGCTGCCATCCCGCTAATAACCATTAATGCCGCCAGGGCGATACCTTTGAACTTCAAGTTCGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGCGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCACGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAACCCACATAACACATCACACAACCAgctt > 2:184351/1‑248 (MQ=255) gcgcTGCCATCCCGCTAATATCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTACGTGTTAATTGACTTGCCCAAAAGTCAGGAGCGCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGATCAATACCGTGTCCCGCCAGCTGCAATGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCtg < 1:481825/249‑1 (MQ=255) aaTGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgcc > 2:446074/1‑251 (MQ=255) ccgccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgccagcc < 1:445978/251‑1 (MQ=255) gccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgccagcc > 1:63650/1‑249 (MQ=255) aGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCt > 2:351228/1‑251 (MQ=255) ggCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGGGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGc < 2:87844/251‑1 (MQ=255) tCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCa < 1:157661/250‑1 (MQ=255) aGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACca < 2:150312/251‑1 (MQ=255) ctctcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACcac > 1:193940/1‑249 (MQ=255) ctcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACcaca < 1:446074/248‑1 (MQ=255) cGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAag < 2:87018/251‑1 (MQ=255) gACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAAt > 2:94320/1‑251 (MQ=255) gACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGTGAATTGTCCCGAGTGCAAACCa < 2:221448/251‑1 (MQ=255) ctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGtt > 1:114974/1‑251 (MQ=255) ggAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCTAGTGCAAACCAGCGtt < 2:410412/249‑1 (MQ=255) gAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTg < 1:391870/251‑1 (MQ=255) cAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTc < 1:264876/251‑1 (MQ=255) aGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTcc > 2:447227/1‑250 (MQ=255) tAGCGCCTCTGTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCcaca < 2:341108/249‑1 (MQ=255) tAGCCCCTCTGTTGTATTTTTCCATCAGATATCACCAAACTGAACAAGGCTTGTGCATGAGCAATACCGTCCCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACATCCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCTTTTTGGTTCAACAt < 2:412888/250‑1 (MQ=255) gcgctgatGTTTTATTGTTCCATCACACAGCGCCTAACTGAACAAGGCTGGTGCATGAGCAATTCCGTCTCGCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCATATTTATAAGGCGCTGTGCTTGTGCCGGTCGCAGACGCGGTGCCAGCCAGGCTGCGTGAAGAGCCAGTCCAAAGAACCACAGGAAAGATCCGCTAATTGTCCCGAGTGCAAACCAGCTTTTTGGTTCCACATCaa < 2:438059/244‑1 (MQ=255) ccTCTGGTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACAGCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCGCAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGGTTTGGTTCCACATCAAGtt < 2:244952/251‑1 (MQ=255) gTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCg < 1:94320/251‑1 (MQ=255) gTTTTATTTTTCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCg < 1:105219/251‑1 (MQ=255) ttttATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGACCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCGc > 2:107074/1‑251 (MQ=255) ttttCCATCAGATAGCACCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCGCTCGCCAGCTGCAAGGCAAGAAACCACATAACACATCCCACAACCAGATTGCTAATGCGCGGTGCTTTGGCCGTGCGCAGACGCGGGGCCAGCCAGGCTGCGAGAAGGGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTGGCCCGCCAAgg < 2:46170/250‑1 (MQ=255) cATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGTCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCGAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGccc < 1:462904/251‑1 (MQ=255) | CCACGTTAACTTCAATCGCAAGAGTGGCAATGTCTGGCACCGCATCCACGCTTGCCGTACCGGAGGTGACAATATGCGGTCCATCCGGCAATTCGTTAGCCTGCGCTGCCATCCCGCTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGCTGCGAGAAGAGCCAGACCAAAGAACCACAGGAAAGAGGCGCTAATTGTCCCGAGTGCAAACCAGCGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCC > NC_000913/3067921‑3068410 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |