| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,906,776 | 0 | A | C | 29.6% | 104.1 / 12.3 | 71 | G95G (GGT→GGG) | rlmA | 23S rRNA m(1)G745 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (38/12); new base C (0/21); total (38/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGA > NC_000913/1906551‑1907024 | gggCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAACTACGTATTATGGCGT‑CCATAC‑TGGTATCGGCCCACGG‑CAAACGGTGG‑CTGGAAGCGCCACAACAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTCTCGCTACCTTCGCAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGGGTACTACCCTTCACCACAGCCAATCTCCAGCAccg > 2:419112/1‑248 (MQ=255)gggCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACTTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAAGGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCAccg < 1:419112/248‑1 (MQ=255) cACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCt > 1:242510/1‑251 (MQ=255) tactCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTat > 1:164505/1‑251 (MQ=255) tGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTAtcatca > 1:246920/1‑250 (MQ=255) ttctGCTTTACACGGCGAGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTccc > 1:144470/1‑251 (MQ=255) gttccTTTAAACGCCGCGTAAATACGTATGATGG‑GTACCATCC‑TGGTGCGGGAAAACGG‑CAAATGGGGG‑CTGGAAGCTACACAAAAAGGGACCGCCGGTGACGGTTTCCCCGCCG‑TTTTTATCGCTACTTTCCAAAAATCCAGGCCAAACGGGTTTATTGGGGTGAACT‑CATCGGAAAATGAGTTTGGGTAATCCCCTTCACAACAGCTGATATCCCGCACCGCCGTGGCCTTATCATCAAGCCGTTcc < 1:275146/245‑1 (MQ=255) gttttACACGGCGCGTAAATACGTATTATGGCGT‑CCATCC‑TGGTATCGGAAATCGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGGGACCTGCGGAGAGCTTTTCGCCGCCG‑CTTTTATCGCTACCTTGGAACCACCCAGACCAAACGTGGTGATTTCGGGCAAGG‑CATCGGCAATTGCGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCa < 1:226011/248‑1 (MQ=255) ttACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTCCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTg > 1:340385/1‑251 (MQ=255) ttACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑GGGTATCGGAAACCGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGCCCGGCGGATAGCTTTTCGCCGCCG‑CTTTTATCGCTCCCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCGCCGCCGTTGCCTTATCAGCAAGCCGTTCCCTCAGtt < 1:369814/250‑1 (MQ=255) ttACACGGCGCGTAAATACGTATTAGGGCGT‑CCATAC‑TGGTATCGAAAAACGG‑CAACCGGTGG‑CTGAAAGCGACAAAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCAAAACATCCAGCCCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTTTAATACCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGtt < 1:272685/250‑1 (MQ=255) acccGGCGCGAAAATACTTATTATGGCGT‑CCATAC‑TGGTACCGAAAAAGGG‑CAAACGGTGG‑CGGGAGGCGACACAAAAAGTGACCTGCGGGTGGCGGTGCGCCGCCG‑CTTTTACCGCTCCCTTCGAAAGATCCAGCCCAACGGTGGTGTGGTCGGGCAACT‑CCTGCGAAAATGCTTCTGTGTAATCCCCTTCCCCACAGCCATTACCCTGCACCGCCGTGGTCTTATCATCAAGCCGTTCCCTCAGTTggg < 1:456754/248‑1 (MQ=255) acacGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGCCCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTgg < 1:14532/250‑1 (MQ=255) ggcgcataaagccgaattatGGCGT‑CCATAC‑GGGTCTCG‑AAAACGGGCAAGCGGGGG‑CGGGAAGCGACAAAAAAAGTACCCGGCGGAAAGCGTTTCGCCCCCG‑CTTTTACCGCTACCTTCGAAACATCCAGCCCAAACGGGGTGTTTTCGGGCACCG‑CATCGGCAAAGGCGTGTGGGTAATCCCCTTCACCCCAGCCAAGATCCAGCACCGCCGAGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGAc < 2:161620/236‑1 (MQ=255) ggCGCGTAAATGGGTATTAGGGCG‑‑CCATACGTGGTCTCGGAAA‑CGG‑CAAACGGGGGGCTGGAAGCAACAAAAAAAGTAACTTGCGAATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCAAAACAGCCAGACCAAACGTGGTGATTGGGGGCAACG‑CATCGGCAAATGCGTGTGGGTAATACCCTTCCCCACGGCCAATAGCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGAc < 2:92909/251‑1 (MQ=255) ggCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGAc > 1:382265/1‑251 (MQ=255) cgcgTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACa > 1:247239/1‑250 (MQ=255) aaaTACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGc > 1:455804/1‑250 (MQ=255) gTATTAGGGCGC‑CCATAC‑TGGTATCGGAAACCGG‑CAATCGGTGG‑CTGGAGGCGACAAAAAAAGTGCCCTGCGGATAGCTTTCCCCCGCCT‑CTTTTATCGCTCCCTTCGAAACATCCAGCCCAACCGTGGTGATTTCGGGCAACG‑CCTCGGCAAATGCGTGTGTTTAATCCCCTTCACCCCGGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGc < 1:115630/251‑1 (MQ=255) aatGGCGT‑CCATCC‑TGGTATCGGAAAAGGG‑CAAACGGTGG‑CTGGAAGCAAAACAAAAGGTGCCCTGCGGAAAGGTTTTCGCCCCCC‑CTTTTATCGCTCCCTCCGAAACATCCAGACCAAACGTGGTGATTTCGGGCACCG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGc < 1:655/249‑1 (MQ=255) t‑CCATAC‑TGTTAACGGAAAGCGG‑AAAACGGTGC‑CTGGAAGCGACACAAAAAGTGCCCGTCGGATGACGTCTTGCCCCCA‑TTTTTATCGCTACCTTCAAAACGCCCAAACCAACCGTGGTTATTCCGGGCACCG‑CACCGCCAAGTGCTTGTTTGTAATCCCCTTCCCCCCGCCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGAt < 1:64970/250‑1 (MQ=255) ccATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATa > 2:116192/1‑250 (MQ=255) cGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCt > 2:379087/1‑251 (MQ=255) cGGAAAACGA‑CAAACGGGGG‑CAGAAAGTGACAAAAAAAGTAACATGCGGATAGCGTTTCGCCGCTG‑TTTTTACCGCGCCGTCCTAACCAACCAGACCAAGCGGGGGGATTAAGGACATGG‑CACGGGCAAATGCGTTTGTGGAATACCCTTCCCCACAGCCAAAATCCAGCGCCGCCGTGGCCTGATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAAGGTCCGGCATCt < 1:417604/251‑1 (MQ=255) ggAAAAGGG‑CAAACGGTGG‑CTGTAAGCGACAAAAAAAGTGTCCTGCGGATAGCGTGCCGGC‑CCGTCTTTTTTCGATCCTTTCGAACCCCCCAGACCAATGTTGGTGTTTTGGGGCCACG‑AATCGGCAAATGCGTGTGTGTAAACCCCTCCACCCCAGCCAATATCCAGCACCGCCGTGGCCTTATCAGCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAAGGTCCGGCAtata < 2:57157/251‑4 (MQ=255) ggAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGAGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCACTATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCt > 2:251119/1‑250 (MQ=255) aaagcGG‑CAAACGGTGG‑CTGGAGGCGACAAAAAAAGTGCCCGGCGGATAGCGTTGCGCCGCCG‑CTTTTAGCGCTACCTTCAAAACATCCAGCCCAAACGTGGTGATTCCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAACACCCTTCACCACAGCCATTATCCAGAACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAg < 1:14013/247‑1 (MQ=255) ggTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCgcggcgg > 2:340490/1‑250 (MQ=255) gg‑CTGGAAGCGACACACCAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTCTCGCTACCTTCGAAACATCCAGACCAAGCGTGGTGATTTCGGGCAACG‑CATAGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCCAGCCGTTCCCTCCGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCt > 2:467772/1‑251 (MQ=255) gataaccGACACAAAAAGGGACCTTCGGAGTGCTTTTCCCCGCCG‑CTTTTCACGCTCCCTTCGAAACACCCAGACAAAACTGGGTGATTTCGGACAACG‑CTTCGGCAAATGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCCCCGCCTTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCAGCTAATAATGCGCGGCGTGCTTGc < 1:121782/245‑1 (MQ=255) ggAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGACG‑CTTTTATCACTACCTTCGAAACATCAAGACCAAACGTGGTGATTCCGGGCAAAG‑CATCGGCAGATGCGTGTGTGTAATACCCTTCACCAAAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGc > 1:454678/1‑250 (MQ=255) gAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATC‑AGACCAAACGTGGTGAATTCGGGCAACG‑CATCAGCAAATGCGTGTGTGTAATACCCTTCACCCCAGCCAATATCCCGCACCGCCCGGGCCTTATCATCAAGACGCTCCCTCACTTTGGCGCCAATTTCCTCACGCCGCGGCTGATAATGTCCGGCCTCTAAGAATTCGGGGCGTTCTTGcgac > 2:96915/1‑248 (MQ=255) agagccacacAAAAAGTCACCGGGGGATGGCGTTGCGCCGCCT‑CTTTGATCGCTCCCTTCAAACCAGCCAGACCAAACGGGGTGATTTCGGGCAACG‑ACTCGGCAAAGGCGGGTGTGAAATCCCCTCCCCCACAGCCAATACCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcat < 2:344573/245‑1 (MQ=255) aaGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcat > 1:344573/1‑250 (MQ=255) aGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcatcc > 2:120353/1‑250 (MQ=255) aGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGcatc > 2:338025/1‑250 (MQ=255) ccaaaaaaatggcccTGGGGATAGCTTTCCGCCGCCT‑TTTTTATCGCTCCCTTCAAAACATCCAGCCAAAACGGGGTGTTTGCGGGAAACC‑CTCCGGAAAATGGGGGTGTTAAATCCCCTTCCCCCCAGCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTc < 2:120838/238‑1 (MQ=255) acaAAAAGGCACCTGCGGATGCCTTTTCCCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAACCGTGGTTATTTCGGGCAACG‑CATCGGCAAAGGGGTGTGTGTAATACCCTTCCCCACAGCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCcg < 1:433748/251‑1 (MQ=255) aaaaaGTGCCCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCGTGCATCATTTCcgcg < 1:116192/251‑1 (MQ=255) gTGACATGCGGCTAGCGTTTCGCCGCCG‑CTTTTATCGATACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTc > 2:422817/1‑251 (MQ=255) aTAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCAc > 1:424110/1‑251 (MQ=255) cctgtgccacgcgg‑cTTTTATCGCTGCTTTCGAAACACCCACACCAATCGAGGTTGTTTCGGTCATCC‑CCTCGGCCAATGCGTGTGTTTAATACCCTTCCCCCCAGCCAATACCCTGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACgag < 1:255675/238‑1 (MQ=255) ttCGCCCCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGAAAATGCGTGTGTGTAATACCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGAcc < 1:346678/250‑1 (MQ=255) cccgccg‑cTTTTATCGCTCCCTTCAAAACATCCAGACCAAACGTGGTGTTTTCGGGAAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGttt < 1:57130/250‑1 (MQ=255) cgccg‑cTTTTACCGCCCCCTACGAAACACCCACCCCAACCGTGGTAATGTCGGCCAACG‑CACCGGCAAATGCTGGTGTGAAATCCCCTCCCCCCCAGCCAATACCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTGGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGTATCACGAGACCGTTTAt < 2:424110/251‑1 (MQ=255) g‑cTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTg > 2:20072/1‑251 (MQ=255) cgcgtttATGGCTACCTTCGAACCATCCAATCCAAGCGTGGTAATTTCGGGAAACG‑CGACGGCAAAGGGGTGTTTGTAAAACCCTGCACCCCAGCCATTTTCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGGGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCt < 1:467772/247‑1 (MQ=255) cTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGCCCGTTTATGCTg > 2:113646/1‑250 (MQ=255) cTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTg > 1:152242/1‑250 (MQ=255) ttATCGCTACCTTCGAAACATCCAGCCCAACCGTGGGGATTTCGGGCAACG‑CATCGGCAAATGGGTGTGTGTAATCCCCTTCCCCACAGCCAATATCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAAc < 1:190256/250‑1 (MQ=255) aatgcgtaccttgaaacctcccAGACCAAACGTGGTGATTT‑GGGGAACGGCAGGGGAAAAGGGGTGGGTGAAATCCCCCTCCCCACAGCAAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACg < 2:382265/230‑1 (MQ=255) aTCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CGTAGGCAAATGCGTGTGTGTAATACCCTTCACCACAGACAATATCCAGCACCGCCGTGGCCTTATCGTCAAGCCGTTACCTCAGTTGGGCGCCAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGACTGCGCGGCGTGCTTGCATCATTTCCGCACTGTCGCCCGGATCAAGAGACCGTGTATGCTGAACggg > 2:44337/1‑251 (MQ=255) ccGCTCCCTTCGAAACACCCAGACCAAAGGTGGTGATTTGGGGCACCG‑CATCGGCAAATGCGTGTGTGTAATCCCCTTCCCCACAGCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCATTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTGGCATCATTTCCTCGCGGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGgc < 1:323272/250‑1 (MQ=255) cTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTCAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGgcagc > 1:229228/1‑247 (MQ=255) tcgaaccgcccAGACCAACCGTGGTGATTGCGGGAACCG‑CATCGCAAAAGGCGTGTGTGAAATCCCCTCCCCCACGCCCAATACCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGAtt < 2:117076/241‑1 (MQ=255) aaCATCCACACCAAACGGGGAGATTCCGGGAAACG‑CAGGGGCAAATGCGTGTGTGTACTCCCCTCCACCCCAGCAAATATCCAGCGCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACAt < 2:144470/251‑1 (MQ=255) gACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATCCCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCcttct < 1:257551/251‑1 (MQ=255) aTTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCaa > 2:242253/1‑250 (MQ=255) tttCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACACACAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGATGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAAc > 1:226362/1‑251 (MQ=255) ttCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACt > 1:58311/1‑251 (MQ=255) cGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTg > 2:46358/1‑250 (MQ=255) gggCAACG‑CATCGGCAAATGCGTGTTTGTAATACCCTTCACCACAGCCCATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGTGCGACACTTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGCCATACCCGTCTTTCGCCATGTCAAACTGAt > 2:8790/1‑251 (MQ=255) g‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTg > 2:110756/1‑251 (MQ=255) cggaaaaTGCGTGGGTGTAATCCCCTTCCCCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTgggg < 1:4326/246‑1 (MQ=255) ggCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCACGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGAc > 1:166588/1‑251 (MQ=255) ggCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCACACTGATGTCGCTGGGGAc > 2:295203/1‑251 (MQ=255) cAAATGCGTGTGTGTAATACCCTTCACCAAAGACAATATCCAGCACCGCAGTGGCCTTCTCATCCAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGAGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGCTTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGAc > 2:458707/1‑249 (MQ=255) ggcgtgtgtaaaaaccccTCCACCACAGCAAATACCCAGCCCCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGatat < 2:247239/236‑1 (MQ=255) aaTACCCTTCACCACAGCCAATCTCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTggg > 2:45161/1‑69 (MQ=255) ttCACCACAGCCAATATCCAGAACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCCCGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGa > 2:463966/1‑214 (MQ=255) tCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATAATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCAcgcg > 1:210757/1‑250 (MQ=255) caccacAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCa > 2:66690/1‑206 (MQ=255) caccacAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGa < 1:295203/250‑1 (MQ=255) | GGGCTTCACTACTCGTGCTAATTCTTCTGCTTTACACGGCGCGTAAATACGTATTATGGCGT‑CCATAC‑TGGTATCGGAAAACGG‑CAAACGGTGG‑CTGGAAGCGACACAAAAAGTGACCTGCGGATAGCGTTTCGCCGCCG‑CTTTTATCGCTACCTTCGAAACATCCAGACCAAACGTGGTGATTTCGGGCAACG‑CATCGGCAAATGCGTGTGTGTAATACCCTTCACCACAGCCAATATCCAGCACCGCCGTGGCCTTATCATCAAGCCGTTCCCTCAGTTGGGCGACAATTGCATCACGCAGCGGCTGATAATGTCCGGCATCTAAGAATGCGCGGCGTGCTTGCATCATTTCCGCGCTGTCGCCCGGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGA > NC_000913/1906551‑1907024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |