| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,135,781 | 0 | G | T | 25.0% | 79.3 / 21.5 | 60 | R197R (CGC→CGA) | pitB | metal phosphate:H(+) symporter PitB |
| Reads supporting (aligned to +/- strand): ref base G (7/38); new base T (15/0); total (22/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACC > NC_000913/3135540‑3136029 | gATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTTCGATCTTcc > 1:328630/1‑251 (MQ=255) gTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAAt < 1:40656/250‑1 (MQ=255) aGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAAt < 1:319337/250‑1 (MQ=255) gAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCAc < 1:354144/251‑1 (MQ=255) aaGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACg < 2:50839/251‑1 (MQ=255) aaGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTGTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACTCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTGGCGATCTTCCGGGATGCGGTTAATACGG‑TCACg < 2:473856/251‑1 (MQ=255) aaGTGGGTAACGGCAGCGCGGGTACGTGTAATTTCATAGCCGGAAGCATTCAGATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCTGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTGTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACg < 2:118600/251‑1 (MQ=255) cGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTc < 1:139147/251‑1 (MQ=255) aTCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTAG‑TTTGCCTTTTTTCTTTTTTCGATCTTTCGGAATGCGGCGAATAACG‑TCACGCTTTTTTGTccccc > 1:339202/1‑249 (MQ=255) gggtacgggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTTTTTTTTCGCTTTTCCGGGAAGAGGGGCATACGG‑TCACGCTTTTTCGTCCCCCTcc > 1:303348/1‑249 (MQ=255) gggtacgggtaATTTCATAGCCGGACGCATTAATATTGACGACGACGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACC‑GTTGCCTTTTTTTTTTTTTCGCTCTTCCGGGAGGGGGGGGATACGGGTC‑CGATTTTTCTTCCCGCTCCac > 2:67277/1‑250 (MQ=255) ggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCCCCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTc < 1:332182/251‑1 (MQ=255) cGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGGTTTCG‑GTTGCCTTTTTTTTTTTTTCGTCCTTCCGGAATGCGGTGACTACGG‑TCCCGCCTTTTTGTCCCGCCCCAGTAG‑CGTCgcacacggaaaat > 2:448150/1‑240 (MQ=255) aCGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCGTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGTAATATCAgg < 2:40667/251‑1 (MQ=255) aTTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTc < 2:109971/251‑1 (MQ=255) tGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTTCCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGGTTACG‑TTTGCCTTTTTTCTTTTTGCGATCGTCCGGAATGCGGTGAATACGG‑TCACGCTGTTTCGTCTCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAAt < 1:59361/250‑1 (MQ=255) tGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTGCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGt < 1:219567/205‑1 (MQ=255) cgacgaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGAcc < 1:253936/251‑1 (MQ=255) acgaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAg < 1:103889/251‑1 (MQ=255) gaAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCG‑TTTTGCTTTTTTTTTTTTTTGGTTTTCCCGGATGCGGTGGATACGG‑GTACGCTTTTTTGTCCCCCTCCAGTAGGCG‑CGCAGCCGGGATAACAGGccccccccccagaccaggg > 2:430359/1‑238 (MQ=255) agcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTTTTTTTTCGATCTTTCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑AGTCGCAGCAGGAAAATAAGGCCTCCCGCAATGACCAGGCcgacgg > 1:272203/1‑250 (MQ=255) gcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGAt < 1:430359/251‑1 (MQ=255) ggggCAATCCCCACCAGTAACAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCG‑TTTGCCTTTTTTCTTTTTTCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGGAG‑CGTCGCAGCAGGAATATCAGGCCTCCCCCAATGACCAGGCCGGCGGTAgg > 1:381118/1‑251 (MQ=255) ggCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGGGAATACGG‑CCACGCTTTTTTGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGCCGATAgggg > 1:308768/1‑251 (MQ=255) cgCAATCCCCACCAGTACCAGCATTACCCGGCCGATCCCGTTGTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACTCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTCAATACTG‑CCACGCTTCTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAgggg < 2:185285/250‑1 (MQ=255) aaTCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGCTTACG‑TTTGCCTTTTTTTTTTTTTCTTTCTTCCGCAATTCGGTGGATACGG‑TCACGCTTTTTTGTCCCCCCCCCATAG‑CCTCGCAGCCGGGAAATCCAGCCTCCCGCAATTACCCGGCCGAACATAGGGGaa > 1:471394/1‑250 (MQ=255) caccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAACACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGGTTTGC‑TTTTTTTTTTTTTCGGTCTTCCGGCATGCGGGGGATAAGG‑TCACGCTTTTTCTTGCCCCCCCCGTAG‑CGTCGCAGCAGGAATAACATGCCTCCCGCACTGAccccgccgcccgacgggggaacaaaa > 2:130201/1‑226 (MQ=255) ccAGCATTACCAGGCCGATCACTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTTTTTTTTCGGTCTTCCGGAATGCGGGGAATACGG‑TCACGCTTTTTTGTCCCCCCCCCGTAG‑CGTCGCAGCCGGAATATCAGGCCTCCCGCAATGAACAGGCCGACGGTAGGGGGAACAATCAGCgagg > 1:178456/1‑249 (MQ=255) cAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCG‑TTTGCCTTTTTTTTTTTTGCGGTCt > 1:341241/1‑133 (MQ=255) cAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCt < 2:341241/133‑1 (MQ=255) tACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑tt < 1:51751/250‑1 (MQ=255) cccAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑tttt < 2:339202/250‑1 (MQ=255) cctctCCCTTTTTGCCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTGTTTTCTGTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCAc < 2:303348/247‑1 (MQ=255) gATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACtt < 1:152431/251‑1 (MQ=255) cccTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTTTTTTTTCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCCGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCCATGACCAGGCCGACGATAGGGGGAACAATCAACGAGGGGAAAA‑TTTTTGTCACTTCAc > 1:381229/1‑251 (MQ=255) ttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGTAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAgg < 1:222984/250‑1 (MQ=255) cgtcgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑GTTTGGTCACTTCACGCAGGTTTAAc < 2:328630/251‑1 (MQ=255) cgcgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACg < 2:65672/249‑1 (MQ=255) gtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCg < 2:130070/104‑1 (MQ=255) gtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑GTTGCCTTTTTTTTTTTTTCGATCtttcg > 1:130070/1‑101 (MQ=255) aaaaCGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTGTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAg < 1:433740/251‑1 (MQ=255) aaaCGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCC‑TGTGCCTTTTTTTTTTTTGCAAACTTCCGGAAAGAGGGGAATACGG‑GCCCGCTTTTTTCTCCCGCTCCAGGAA‑CTTCGCAGAAGGGAAATCAAGCCTCCCGCAATGACCACGGCGGCGGTAGGGGGAACAAACACAGAGGAGAAAAATTTTGGCAATTTCA‑GCAGGATTAACGcctcccacaccgcagagc > 1:229410/1‑238 (MQ=255) aaaCGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGCTTACG‑GTTGCCCTTTTTTTTTTTTCGATCTTCCCGAATGCGGGGGATACGG‑GCACGCTTTTTTGTCCCGCCCCAGTAG‑CGTCGCCGCAGGAAGATCAGGCCTCCCGCAAAGACCAGGGCGGCGATCGGGGAAACAAACAGCGGGGGGAAAA‑TTTTGGGCACCTCACCCAGGGTTAACGCATCCACTACCGCTGAGc > 2:24373/1‑251 (MQ=255) acgccacgccGGCAGCGGAAACGAGCAGCGCAATACGCGTCGAGGATGGCGGTGTACG‑TGTGCGTTTTTTCTTGGTGCGATCTTCCGGAATGCTGTGAATACGG‑TCACGCTTTTTCGTCCCGCGCCAGGAG‑CGTCGCAGCAGGAATATCAGGCCGCCCGCAATGACCATGCCGACGATAGGGGAAACAATCAGCGATGAGAAAA‑TTGTGGTCTCTTCACGCGGGTTTAACGCATCTATCATCgaggagaag < 2:420694/251‑4 (MQ=255) ccactccCGCAGCTGAAACATGCAGCGCAATACGCGTCCAGAATGGCGGTTGACG‑TTTTACTTTTTTCTGTTGGCGATCTTCCGGAATGCTGTGAATACGG‑TCACGCTGTGTCGTCCCGCTCCAGTAG‑CGTCGCAGCACGAATATCAGGCCTGCCGCAATGACCAGGCTGTCGATAATCGAAACTATCAGCGAGGAAAAAA‑GGTGGGTCACTGCACGCAGGTTTAACGCATCCATCTTCGAGGAGCC‑GGtt < 2:457199/251‑1 (MQ=255) cAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑GTTGTCTTTTTTTTTTTTTCGGTCTTTCGGGAAGCGGGGGATACGG‑TCACGCCTTTTTGTCCCGCCCCAGTAG‑CGTCGCCGCAGGGATAACTGGCCCCCCGCAATGACCAGGCCGACGGTAGGGGAAACAAACAGCGAGGAGGAAA‑TTTTGGTCACTTTACGCCGGGTTTACGCCTACAACACCGATGAGCCCGGTTA‑CAGcgcg > 1:256422/1‑251 (MQ=255) gCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGtt < 1:65681/251‑1 (MQ=255) gCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGtt < 2:381118/251‑1 (MQ=255) aaaCAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGACAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATg < 1:58518/228‑1 (MQ=255) aTCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAAcc < 1:264018/251‑1 (MQ=255) aCGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATa < 1:400097/250‑1 (MQ=255) gcgaccAGAATGGCGGTTTACG‑GTTGCCTTTTCTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGGCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCGCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACCCAGGTTTAACGGATCCAGCACGGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATc < 2:279099/247‑1 (MQ=255) cAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCAcc < 2:178456/251‑1 (MQ=255) gCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCGCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCTCTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAg < 2:265358/251‑1 (MQ=255) gaCG‑TTTGCCTTTTTTCTTGTTGCGATCTTCCGGAATGCGGGGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGTAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCAGCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAAGCAAGGTGTGc < 2:424112/250‑1 (MQ=255) tttGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAAc > 2:4184/1‑251 (MQ=255) tttttCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCGTTGTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTGTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGTGCC‑GGTTAACAGCGCGTGGGTTAAACCGATGCCGATAATCGCACCAATCAATGGGTGCGAACTGGAg < 2:279909/249‑1 (MQ=255) tttttGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGCACAGGCCGACGATAGGGGAAACAATCAGAGAGGAGAAAA‑TTTTGGACACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGAACCAATCAAGGTGTGCGAACTGGAGGCCGGTa > 2:67918/1‑250 (MQ=255) tttGCGATCTTCCGGAATGCGGTGACTACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGCTAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAAc > 2:220519/1‑251 (MQ=255) ttGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCCCCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAAcc > 2:112882/1‑251 (MQ=255) | GATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑TTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATACGG‑TCACGCTTTTTCGTCCCGCTCCAGTAG‑CGTCGCAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCC‑GGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACC > NC_000913/3135540‑3136029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |