| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,455 | 1 | . | G | 98.4% | 233.4 / ‑3.4 | 64 | intergenic (+589/+167) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (32/31); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
CTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGC > NC_000913/3560207‑3560696 | cttcttTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCCGCGCCGCACCGCCATGATGG‑cgc > 2:127673/1‑249 (MQ=255) ttttACAATCAACGTGTTAGCAACGTTGAGAGTGTTGGTGACAATACGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGATTCAGGCATGATGCCGATATCGTTAAACAGCGTCGAGCAATTTGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTGG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCACCGCAACGCCATGATGG‑cgcaggg > 2:142567/1‑245 (MQ=255) tACCATCACCGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGAAAATTGCTGTGATGGAGCAGGGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGAAAAACAGCGTCGAGCCATGGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATc < 1:137774/250‑1 (MQ=255) aCCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATc > 1:225573/1‑249 (MQ=255) aCGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGTTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCCCCGCCAGGATGG‑CGCAGGATCAGGTTTTGc > 2:353184/1‑251 (MQ=255) aCGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGc > 2:228054/1‑251 (MQ=255) cGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCTGATGG‑CGCAGGATCAGGTTTTGCt > 1:328032/1‑251 (MQ=255) aCGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTc > 2:47943/1‑251 (MQ=255) ttgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGAGTGAGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTcgcg > 1:323413/1‑251 (MQ=255) tgGTGACAATGCGCAAATTGCTGTGATCGAGCAGTGCGAGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcgg > 1:182303/1‑251 (MQ=255) aCAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAt > 1:45478/1‑251 (MQ=255) cgcAACTTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATCTCGATAACCAGCGTCGAGCCCTTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGACGGCAGCGCCGCCCCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGACTCGTCTg > 2:286592/1‑251 (MQ=255) cgcAAATTGCTGTGATTGAGCAGTGCGTGCGCTCCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCAATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGACGGCAGCGCCGCACCTCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCTGCGCATTGAGGTCGCGGCGAATGGTCTg > 2:380523/1‑251 (MQ=255) ggggggtaTTGAGCAGGGCGTGGGCTACGGCTTCCGGCGTGGGGCCGATAGGGAAAAAAAGCGTGGAGCAATGGGGG‑ATTT‑GTTCCGCCCCTTGGCGGGCGAGGCGCTCTTTTTCTTCG‑GGCTGGGTGGCTTTGGGAGCGTGCCACGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCt < 1:168354/243‑1 (MQ=255) tgtgATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACg > 2:188744/1‑251 (MQ=255) gaggtgggggcccTACCGCTTCCGGGGTGGTCCCGAAATCAATAAACAGCTGCGGGCCTTGGGGG‑TTTT‑GCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGc < 1:229656/239‑1 (MQ=255) gCAGTGCGTGCGCTCCCGCTTCGGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCTTTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGc < 1:201296/251‑1 (MQ=255) aGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGctc > 1:345307/1‑251 (MQ=255) cccgtttcgggCGGGGTGCCGATAGCGATAAACAGCGTCGAGCCATGGGGG‑ATTG‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTTTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTc < 1:116660/242‑1 (MQ=255) ccgggcggggggccgtaatctaaaaaCAGCGTCGATCCAT‑GGGG‑ATTTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCGGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCGTCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt < 1:48484/228‑1 (MQ=255) cGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTg > 1:296496/1‑250 (MQ=255) ggCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGAc > 1:178567/1‑251 (MQ=255) atCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGACTAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt > 2:103721/1‑251 (MQ=255) ggcggcgggcttgggggttttt‑GCCCCGCCTCTTGGCGGGCGATGCTCTCTTTTTCTTCG‑GGTGGGGGGGCCTTGCGTCCGTGCCCCGGCGGGTTAACCGACCTGGAAGGCAGCGCCCCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTc < 2:349032/232‑1 (MQ=255) gcgcggcgCCATTGGGG‑ATTG‑CCTCCGCCCCTTTGCGGGCGATGCGCTCTTTTTCTCCG‑GTCTGGTTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCg < 1:348982/244‑1 (MQ=255) ccggagacctatggggcattggccccGCCAGTTTGCGAGCGAGCCGCTCTTTTCCGAGG‑GTCTGGGTGGCGTCACGATCGTGCCACGGGGTGTTAACGGAACTGGAAGGCAGCGCCGCCCCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCg < 1:380523/227‑1 (MQ=255) ggggtgacgtggggggttgtcTCCGCCTCTTTGCGTGCGATGCGCTCTGTTTCTTGG‑GTCTGGGGGGCCTCGCGATCGGCCCACGGCGTGTTATCCGAACTGGAAGGCATCGCCGCCCCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAGTGCTCTGCCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGat < 2:456398/231‑1 (MQ=255) aGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGATCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCTGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCCGTTGGataat > 2:364065/1‑250 (MQ=255) ccttGGGGTATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCGTGCGATCGGGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAcc < 1:234260/249‑1 (MQ=255) gccccagaagtacGGGCGATGCGCTCTTTTTCTTCG‑GTCGGGGTGGCCTTGGGGTCGTGCCCCGGCGTGTTAGCCTAACGGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGGCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTGCCAGCTCTTCGGGACTGACATAACCCTGCTGTGTAACCAGTTCGATAATACCGTTGGGACGTTgtgt < 2:431387/239‑1 (MQ=255) ccGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTgtgt < 1:110167/250‑1 (MQ=255) ttGCGGGCTATGCGCTCTTTTTCTACG‑GTCTGGGGTGCCTTGCTATCGTGCCACGGCGTGTTAACCGAACTGGAAGCCAGCGCGGGACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCGCTTCGGTACTGACATAACCCTGCTTTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc < 1:286592/249‑1 (MQ=255) ttGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGTTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTc < 1:422565/249‑1 (MQ=255) tGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAt < 1:47943/250‑1 (MQ=255) gCGGCCGATGCGCTCTTTTGCTTCGTGT‑TGGGTGGCCTTGCGACCGGGCCACGGCTTGTTACCAGAACTGGGAGACGGCGCCGCACCGCCAGGATGG‑CGCAGGATCAGTTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAttt < 2:345145/251‑1 (MQ=255) gggcggtgcgtcttttttCTCCG‑GTGTGGGGGCCCTGGCGATCGTGCCCCGGCGTGTTAACCGAACGGGAAGGCAGCGCCGCCCCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTtat < 2:45478/238‑1 (MQ=255) gATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCTTTTATAAAt > 2:8525/1‑251 (MQ=255) gATGCGCTCGTTTTGTTCG‑GTCTGGGTGGCCTTGCCACCTTGCCCCGGCGTGTAAACCGACCTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGAGAATACCGTTGTGACGGTGTGTTTGTTTCAGTTATAAAt < 2:47641/251‑1 (MQ=255) cgcTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCt > 2:151174/1‑251 (MQ=255) ctTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGACCTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGa > 2:245318/1‑250 (MQ=255) tttgtctgcG‑GTCGGGGTGGCCTGGCGATCGTGCCACGGGGTGTTACCCGAACGGGAAGGCAGGGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTGGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGGTGTGTTTGGTTCATTTATAAATCCCTGGaa < 2:225573/242‑1 (MQ=255) cttcG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTCACCGAACTGGAAGGCAGCGCCGCACCGCCATGCTGG‑CGCAGGATCAGGTTTTGCTCCTCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGCTAATACCGTTGTGACGTTGTGTTTGTTTCTTTTATAAATCCCTGGAATTAttt > 2:3384/1‑251 (MQ=255) cttcG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGAGTTAAACGAACTGGAAGGCCGCGCCGCACCGCCCTGCTGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCCCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttt > 2:450536/1‑251 (MQ=255) tcg‑gtcggGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttt < 1:8525/249‑1 (MQ=255) gttcagacgtgtgctctaccgaccggCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAAGGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTGGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttc < 1:221008/226‑1 (MQ=255) gtcggggTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgtt < 1:341469/247‑1 (MQ=255) gTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgtt > 2:9585/1‑251 (MQ=255) gTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgtt > 2:127902/1‑251 (MQ=255) gggTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACg > 1:460207/1‑205 (MQ=255) gTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTcgcg > 1:130026/1‑251 (MQ=255) gggCCTGGCGATCGGGCCCGGGCGTGTTAACCGAACGGGAGGGCGGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCgcgc < 2:178567/250‑1 (MQ=255) ggCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCgcgc > 1:120689/1‑250 (MQ=255) ggCCTTGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGGGCCGCACCGCCATGATGG‑CGCAGGATCAGGCTTTGATCCCCCAGCTCTTTGAGGTCGCGGCGAATACTCTGCGGACTGACGGAGAAATGCTCTACCAGCTATTCGGAACTGACATAACTCTGCTGTTTAACCAGTTCGCTAATACCGTTGTGCCGTTGTGTTTGTTTCATTTATTAATCCCTGGGATTATTTTCGTTTTCgcgc > 2:23685/1‑250 (MQ=255) ccTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCATCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCCTTGTGGTCGCGGCGAATAGTCTGCGGGCTGACGGCGAAATGCTCTACCACCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCCCGTTGTGACGTTGGGTTTGTTTCATTTCTAAATCCCCGGAATTCTTTTCTTTTTCGCGCAtt > 2:379699/1‑251 (MQ=255) gCCACGGCGTGTTAACCGTAATGGAAGGCAGCGCCGCACCGCCATGATGGAG‑CCGGATCAGGTTTTGCTACGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTCTAAATCCCTGGCATTAttttt > 2:221008/1‑225 (MQ=255) ccACGGCGAGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGCATCCGATTTTGCTCCGCCAGCTTATTGAGGACGCGGCGAATAGGCTGCGGGCTGCCGGAGACAAGCTCTACCAGCTCTTCGGTACTGACATGACCATGCTGTTTAACCAGTTCGATAATCCCGGTGGAACGTTGTGTTTGTTTCATTTATAACTCCCTGGAATTATTTTCGTCTTCGCGCATTGAGCGAATcaac > 2:440218/1‑250 (MQ=255) ggCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACaaa > 1:289740/1‑249 (MQ=255) tAACCGAACTGGAAGGCGGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCg < 1:364065/250‑1 (MQ=255) agccGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCt < 1:103106/249‑1 (MQ=255) aaCCGAACGGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCt < 1:245318/251‑1 (MQ=255) aCTGGAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAccc < 1:228054/251‑1 (MQ=255) cTGGAAGGCAGCGCCGCAACGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAACTGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATAAACAAAAGCCATCGCTAAAccc > 2:229101/1‑250 (MQ=255) ggAAGGCAGCGCCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCAc < 1:353792/250‑1 (MQ=255) cgcgcCGCACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTGTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATGTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAAcc < 2:467000/250‑1 (MQ=255) cgccgcACCGCCATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGGCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGGTTCATTTATAAATCCCTGGAATTATTTTCGTTTACGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCg < 2:328032/251‑1 (MQ=255) cATGATGG‑CGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGc > 1:272323/1‑251 (MQ=255) | CTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTT‑GCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCG‑GTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGG‑C‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGATGTGTGC > NC_000913/3560207‑3560696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |