Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,304,813 (C)7→8 coding (1005/1245 nt) mtr ← tryptophan:H(+) symporter Mtr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,304,8131.C89.7% 193.0 / 11.4 68coding (1005/1245 nt)mtrtryptophan:H(+) symporter Mtr
Reads supporting (aligned to +/- strand):  ref base . (6/1);  new base C (25/36);  total (31/37)
Fisher's exact test for biased strand distribution p-value = 4.14e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCC‑‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTCCGG  >  NC_000913/3304565‑3305058
                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       
aCCGCTCATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccccccca                                                                                                                                                                                                                                                        <  2:43693/251‑3 (MQ=255)
       aTTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGCATTTCGGGCTCCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTCGCCGGTAAACCAGCCTAACCAATGGCGTACAGGAATCCGTTCGGGAACAACCACCACCCCC‑‑ACAACTgg                                                                                                                                                                                                                                               >  2:193165/1‑251 (MQ=255)
          aCTGATACACCGGCAGTAAATTAAAGCTCTATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCCCCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACATGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCgg                                                                                                                                                                                                                                            <  1:237267/251‑1 (MQ=255)
            tGATACACCGGCAGTAAATTAAAGCCCGCTAAAATATGCACCAGTGAGTTACCGACGCCAAAAACCAGAATCAGCGCAATCATCGACTTACCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGCAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAACCCCCCCC‑‑ACAACTGGCgggg                                                                                                                                                                                                                                          >  1:455032/1‑251 (MQ=255)
                             aTTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTCACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCCGCAAAGcc                                                                                                                                                                                                                         >  2:188298/1‑251 (MQ=255)
                                   gCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc                                                                                                                                                                                                                   <  1:380687/251‑1 (MQ=255)
                                   gCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc                                                                                                                                                                                                                   <  1:69877/251‑1 (MQ=255)
                                         tAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCgg                                                                                                                                                                                                             >  1:221608/1‑251 (MQ=255)
                                           aaaTATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGcc                                                                                                                                                                                                           >  1:127585/1‑251 (MQ=255)
                                           aaaTATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGAAGCACGGGCTAACAGCGCCGGAACACTTGCCGCCCAGATGGTAGCCGCTAAACCAGCCTAACCAATGGCGTACCGGAATCCGTTCGGGAACAACATCCCCCCCC‑‑ACAACTGGCGGGGCCAAGGCCAGCAATGCCGTTTTCAAGCggac                                                                                                                                                                                                           >  2:143788/1‑249 (MQ=255)
                                                  cACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGcc                                                                                                                                                                                                    <  1:264915/251‑1 (MQ=255)
                                                  cACCAGTGCGTTGCCGAAGCCCACCTCCAGAATCAGAGCACTCCTCGGCTTGCCACCGCACACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATCGTAGCCGCTAAACCAGCCTAACCAATGGCGTACAGGAATCCGTTCGGGCACAACAGCCCACCCC‑‑ACAACTGGCGGTGCCAGGGTCAGCAATGCCGGTTTACAGCGGccccaaacc                                                                                                                                                                                                    >  2:278420/1‑245 (MQ=255)
                                                   cccAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAAGGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg                                                                                                                                                                                                   <  2:454283/250‑1 (MQ=255)
                                                         gCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGGCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcgt                                                                                                                                                                                             >  1:156861/1‑251 (MQ=255)
                                                             tGCCGACGCCAAACCCCAGAACCAGCGCAATCCGCGGCTTGCCCCCCCAGACCCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGa                                                                                                                                                                                          <  2:366265/250‑1 (MQ=255)
                                                                cGACGCCAAACCCCAGAAGCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAcc                                                                                                                                                                                      <  2:23327/251‑1 (MQ=255)
                                                                 gACGCCAAACACCAGAATAAACGCAATCCTCGGCTTCCAACCCCCGCCGCGGCATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGCTGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAccc                                                                                                                                                                                     >  1:417567/1‑250 (MQ=255)
                                                                   cGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCCAGCGGCCCACAGCCGAGTCGTCGAAAccca                                                                                                                                                                                    >  2:344583/1‑248 (MQ=255)
                                                                     ccAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCCAAc                                                                                                                                                                                  >  1:351858/1‑250 (MQ=255)
                                                                      cAAACACCAGAATCAGCGCAATCATCGGCTGGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGTTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAg                                                                                                                                                                                <  2:144352/251‑1 (MQ=255)
                                                                        aaCACCAGAATCAGAGCAATCATCGGCTTGCCAACCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAACCCCCCCC‑‑ACAACTGGCGGGGCAAAGGTCAGAAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAAAGa                                                                                                                                                                               >  2:329022/1‑250 (MQ=255)
                                                                         acacCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCCATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAc                                                                                                                                                                                  >  2:33890/1‑246 (MQ=255)
                                                                             cAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGcc                                                                                                                                                                         >  1:356020/1‑251 (MQ=255)
                                                                              aGAATCAGCGCAACCATCGGCTTGCCACCCCAGACGCGGAATTCCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCa                                                                                                                                                                        <  2:127585/251‑1 (MQ=255)
                                                                                   cAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCGGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAg                                                                                                                                                                   <  2:96519/251‑1 (MQ=255)
                                                                                    aGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGt                                                                                                                                                                  <  1:193165/251‑1 (MQ=255)
                                                                                                ggCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATGGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGGCAAACAAACCCa                                                                                                                                                      <  1:145753/251‑1 (MQ=255)
                                                                                                 gCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCac                                                                                                                                                     >  2:76042/1‑250 (MQ=255)
                                                                                                    tGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGc                                                                                                                                                    <  1:344583/249‑1 (MQ=255)
                                                                                                    tGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAAGGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAATCAGATCTGCCAGATAGTCAAACAAACCCAGCg                                                                                                                                                   <  2:240400/250‑1 (MQ=255)
                                                                                                     gCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGTAACAATTGCCGCCCAGATGGTAGCCTCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGAGCTGCCAGATAGTCAAACAAACCCAGCGtt                                                                                                                                                 <  1:393145/251‑1 (MQ=255)
                                                                                                     gCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGt                                                                                                                                                  >  1:235028/1‑251 (MQ=255)
                                                                                                         ccccAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGc                                                                                                                                             <  1:71909/251‑1 (MQ=255)
                                                                                                                    gAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAATGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAAAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGCGgaacga                                                                                                                                   >  1:314680/1‑250 (MQ=255)
                                                                                                                      aTTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCcaca                                                                                                                                                                                                       >  2:462146/1‑180 (MQ=255)
                                                                                                                      aTTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCcaca                                                                                                                                                                                                       <  1:462146/180‑1 (MQ=255)
                                                                                                                      aTTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACt                                                                                                                                <  1:33890/251‑1 (MQ=255)
                                                                                                                          caggCTGCCAAAGCGTGTACGCGATGCACGGGCTAACAGCGCCGGAACAATTTCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAATGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGAGAGTCAAACAAACCCATCGTTCCGCCGATGAACGAACTCGCt                                                                                                                            <  2:450733/249‑1 (MQ=255)
                                                                                                                           gggCTGCCAAAGCGGTTGCGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTa                                                                                                                           <  2:152345/251‑1 (MQ=255)
                                                                                                                             gCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGCCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTCACGCCGAGGAACGCACTCGCTAcc                                                                                                                         >  2:209767/1‑251 (MQ=255)
                                                                                                                             gCTGCCAAAGCGTTTAAGCGATACACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGACGCTAAACCAGCATAACCAATGGCGGACAGGAACCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGGCAGCAATGCCTTTTTCAAGCGGCCCACAGCCTAGTCGTCGAAACCAAACAGATCTTCCAGATAGTCAAACAAACCCAGCGTTACGCCTAGGAACGAACTCGCTAcc                                                                                                                         <  2:361654/251‑1 (MQ=255)
                                                                                                                                gCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGc                                                                                                                       >  1:393068/1‑250 (MQ=255)
                                                                                                                                     aGCGTTTACGCGATGCACGGGCTAACAGCGCCGGCACAATTGCCGCCCAGATGGTAGCAGCTACACCAGCATAACAAATGGCGTACAGGCATCAGTTCGGGAACAACCGCCCCCCCCACCACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCCAGCGGCCCACAGCCGGGACGACGCCACCAAACAGATCTGCCCGATCGTCAAACAAACCCAGCGCTACGCCGAGGAACGACCTCGCTACCGCACAGtt                                                                                                                 >  2:436360/1‑251 (MQ=255)
                                                                                                                                            aCGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAac                                                                                                          <  1:209767/251‑1 (MQ=255)
                                                                                                                                                   gCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCACTGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGAcc                                                                                                    >  1:68616/1‑250 (MQ=255)
                                                                                                                                                             aCAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTGCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACTAACTCGCTACCGCAAAGTTGGAGAACACGACCAGCAGCAGATc                                                                                         <  2:410647/251‑1 (MQ=255)
                                                                                                                                                                    cGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCCAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACCCGACCAGCAGCAGATCCAGACt                                                                                   >  1:274956/1‑250 (MQ=255)
                                                                                                                                                                           aTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGt                                                                           <  1:334118/251‑1 (MQ=255)
                                                                                                                                                                             tGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGtt                                                                          <  1:411452/250‑1 (MQ=255)
                                                                                                                                                                                 gccCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCCTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGCTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGt                                                                      >  1:316561/1‑250 (MQ=255)
                                                                                                                                                                                  cccAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCTCCCCC‑‑ACAACGGGCGGGGCAAAGGTCAGCAAGGCCGTTTGCAAGCGGCCCGCTGCCGATTCGTCGAAACCAAACATATCTGCCAGATAGTCAAACAAACCCATCGTTACGCCGAGGAACGAACTCGCTACCGCAAATTTTGAGATCACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTAc                                                                    <  1:278420/251‑1 (MQ=255)
                                                                                                                                                                                          gTAGCCGCTAAACCAGCATAGCCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTGCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCGGCCAGATAGTCAAACAAACCCAGCGTTACTCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACTACCAGCAGCAGATCCAGACTACGGCTGTGCAGTACGCCGCTTa                                                            <  1:81899/251‑1 (MQ=255)
                                                                                                                                                                                              ccGCTAATCCAGCACAACCAATGGCGTACAGGAGTCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGGTTTCAAGCGGCCAACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACGCGCGGCCGCAAAGTTTGAGAACACGACGAGCATCAGATCCTGACTACGGCTTTTCAGTACGCCGCTTAACGc                                                        <  2:232617/251‑1 (MQ=255)
                                                                                                                                                                                               cGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGcc                                                       <  1:436360/251‑1 (MQ=255)
                                                                                                                                                                                                   aaaCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGt                                                    <  2:235028/251‑1 (MQ=255)
                                                                                                                                                                                                   aaaCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGt                                                    >  1:459845/1‑250 (MQ=255)
                                                                                                                                                                                                            tAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACAt                                          >  1:45119/1‑251 (MQ=255)
                                                                                                                                                                                                                    ggCGTACAGGAATCCGTTCGGGAACAACTGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTa                                  <  2:256359/251‑1 (MQ=255)
                                                                                                                                                                                                                    ggCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGAAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGACCCAGACTAAGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATAtt                                   >  1:44847/1‑250 (MQ=255)
                                                                                                                                                                                                                      cGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTAcc                                >  2:336318/1‑251 (MQ=255)
                                                                                                                                                                                                                       gTACAGGAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCCCATCACTATTACCg                               >  2:144100/1‑251 (MQ=255)
                                                                                                                                                                                                                            ggAATCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCtt                          <  1:146610/251‑1 (MQ=255)
                                                                                                                                                                                                                              aaTCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTtct                        <  1:144100/251‑1 (MQ=255)
                                                                                                                                                                                                                               aTCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGCGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGca                                             >  2:300615/1‑229 (MQ=255)
                                                                                                                                                                                                                               aTCCGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGca                                             <  1:300615/229‑1 (MQ=255)
                                                                                                                                                                                                                                cacGTTCGGGAACAACAGCCCCCCCCACAACGGGCGGGGCAAAGGGCAACAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAGCTCGCTACCGCAAAGTTTGAGAACACTACCAGCAGCAGATCCAGACAACGGCTGTTCAGTGCGCCGCTTAACGCCTGTGCCAGCACTTCAATAATACCGCCCTActct                      <  2:69551/249‑1 (MQ=255)
                                                                                                                                                                                                                                 ccGTTCGGGAACAACAGCCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTctct                      <  1:26718/250‑1 (MQ=255)
                                                                                                                                                                                                                                       gggacaaacaGCCCCCCCCACAACGGGGGGGTAAAAGGTAAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGGTTGAGAACACGTCCAGCAGCAGTTCCAGACGACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTATCTGCAATAc               <  2:185810/245‑1 (MQ=255)
                                                                                                                                                                                                                                            caacaGCCCCCCC‑‑AACAACTGGCGGGGCAAAGGTCAGCACTGCCGATTTCAAGCGGCCCACAGCCGCGTCGTCGACACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTCCGCCGCTTAACCCCTGTACAAGCACATCAATATTACCGCCCTTCTCTGCAATACCGAt           >  1:72484/1‑250 (MQ=255)
                                                                                                                                                                                                                                                  gcccccccc‑‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTc     >  1:75022/3‑251 (MQ=255)
                                                                                                                                                                                                                                                    ccaccccc‑‑ACACCTGGCGGGGCAAAGGACAGCAATCCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGTTAGTCAAACAAACCCAGCGTTACGCCGAGGAACCAACTCGCTTCCGCAAACTTTGACAACACGACCAGCAGCAGATCCAGACTACGGCTGTACAGTACGCCGCTTAACGCCTGTACCATCCCATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTcc    <  2:314680/248‑1 (MQ=255)
                                                                                                                                                                                                                                                     cccccc‑‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTCCgg  <  1:10496/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     cccccc‑‑ACAACTGGCGGGGCAAACGTCAGCAGTGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACCGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTGCTCTGCAATACCGATAAACTCCgg  <  2:44847/251‑1 (MQ=255)
                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       
ACCGCTGATTACTGATACACCGGCAGTAAATTAAAGCTCGATAAAATATGCACCAGTGCGTTGCCGACGCCAAACACCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTTTACGCGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCC‑‑ACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAAACAAACCCAGCGTTACGCCGAGGAACGAACTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTCCGG  >  NC_000913/3304565‑3305058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: