| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,216,481 | (G)6→7 | coding (11/765 nt) | nfeF ← | NADPH‑dependent ferric‑chelate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,216,481 | 1 | . | G | 92.7% | 135.2 / 7.3 | 55 | coding (11/765 nt) | nfeF | NADPH‑dependent ferric‑chelate reductase |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base G (17/34); total (18/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.39e-01 | |||||||||||
ACGCGACGGTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTAGCGGGGG‑‑G‑T‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAA > NC_000913/3216234‑3216722 | aCGCGACGGTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCggggg‑‑ggtg > 1:467805/1‑248 (MQ=255) gcgACGGGGGGCGTGGTCCTGCCGGCCAGACGATGCCCTCTGCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACTATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGGCAGTTCACGGAAGCGCAGAGCATTTCGAACGCGCTGCGGGTGGCggggg‑‑ggtgtt < 2:191421/251‑6 (MQ=255) gACGGTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTAt < 1:10110/251‑1 (MQ=255) gggTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTc < 1:367253/250‑1 (MQ=255) ggTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACAGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTc > 1:44287/1‑250 (MQ=255) gTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCAt < 2:391943/251‑1 (MQ=255) gggCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTGCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTg < 2:156450/251‑1 (MQ=255) gCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCATTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGtt < 2:341303/251‑1 (MQ=255) ccgcgcAGACGACGCCCTAATCCGTTACGGATGGCGTCACAAAGTTAGCGTAAGGGTGAGGAAAGAAGAGTTTGCTGTGATCGACAGAGCCACGCGATGTAGAGCCGGCCAGCGCCGCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAACGCAGATCATTGCGAACGGGCTGCGTGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTct < 2:259221/245‑2 (MQ=255) ccGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAACGTGAGCGTCCGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTGACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGt > 2:60343/1‑251 (MQ=255) ggCCAGACGATGCCCTCTTCCGTGACCGTTGGTGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGa < 1:13981/251‑1 (MQ=255) cAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑Tgg > 1:395979/1‑251 (MQ=255) aGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGt > 1:195809/1‑251 (MQ=255) aCGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACCGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGC‑TGGTa > 2:220332/1‑250 (MQ=255) aCGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTaa < 1:21426/251‑1 (MQ=255) gattcccTCTGCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGAAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGTCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATc < 1:80292/247‑1 (MQ=255) cGTTACCGTTGGCGGCACAAAGGGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCGCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGGGA‑TTGTAATCAGATATATCtaa < 2:406586/251‑1 (MQ=255) ttACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGACGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGA‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCtaaat > 2:213231/1‑251 (MQ=255) ttGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGATTGCTGTGATCGTCAAAGCCACGCGATGTAACACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACt > 1:64612/1‑251 (MQ=255) gcACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCaaa < 1:413103/251‑1 (MQ=255) aaaGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCAtt > 2:366497/1‑197 (MQ=255) aaaGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCAtt < 1:366497/197‑1 (MQ=255) gCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCTCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTTA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGAtt < 2:411986/251‑1 (MQ=255) gCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGGAACACAGTCAGTTCACGGAGGCGCAGATCATTGCGAACGCGCGGCTGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCGTTCGTGA‑TGGTAATCAGATAGATCTAAATAGAACTCGCAAATGATAATGAtt < 2:480551/251‑1 (MQ=255) aGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TTGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTaa < 1:35978/251‑1 (MQ=255) gTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATc < 1:146489/251‑1 (MQ=255) aGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATg > 2:78878/1‑250 (MQ=255) agTTTGCTGTGATCGTCAAAGCCCCGCGATGTAACACCGTCCAGCGCCTCGCAGCCGAGGACAATGCGCTGAAAGCCGGCGCTGATGCGCTTAACGCGTAACACAGTCAGTTCACGGAAGCGCCGATCATTGCGAACGCGCTGCGGGGGGCGGGGG‑‑G‑G‑GGTTCTTCATTGTTATCTCCTTCGTGC‑TGGTAATCAGCTATATCTCAATAAAACTCGCAAATGATAATGTTTGTTAATCATGCTAAATGCa > 2:312937/1‑249 (MQ=255) gCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGAtt < 2:361959/251‑1 (MQ=255) gtgATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTAGTCATTTTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAAGTATAATGATTGTTAATCATGATAAATGCAAGCGAttt < 2:478953/249‑1 (MQ=255) ccACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGt < 1:281521/251‑1 (MQ=255) cACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGCACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTACTCATGATAAATGCAAGCGATTTGTAGAACTGATATGTc > 1:469963/1‑251 (MQ=255) aaaaCCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTg < 1:175566/250‑1 (MQ=255) aaaaCCGCCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAGCCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGGGA‑TGGTAATCAGATATATCTAAAGAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTg < 1:312937/250‑1 (MQ=255) aaaCCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGGAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGAGTTGTAGAACTGATATGTCTATAGTCTGAt < 2:389975/251‑1 (MQ=255) aaaCCGGCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGAt < 2:152093/251‑1 (MQ=255) ccGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGGT‑G‑T‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAg < 1:202902/251‑1 (MQ=255) ccAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCGGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGGGTG‑T‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACg < 1:479434/251‑1 (MQ=255) cAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGa > 2:321629/1‑250 (MQ=255) aGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAAc < 2:467805/251‑1 (MQ=255) gcgcCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAATCGATTTGGAGAACTGATATGTCTATAGGCTGATAAGACGAAcc < 2:64612/251‑1 (MQ=255) cgcCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCg < 1:392715/251‑1 (MQ=255) gccgccGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCtctt > 2:283929/1‑251 (MQ=255) aGGACAATGCGCTGAACACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGc > 1:407034/1‑251 (MQ=255) gAAACCCGGCTCTGATGCGCTAAACGGGTAACACAGTCAGTTCACGGAGGCGCAAATCATTGCGACCGCGCTGGGGGGGGGGGGGG‑‑GGT‑G‑TTATTCATTGTTACCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACGCGAAAATGATAATGTGTGTTAATCAGAATAAAGGCAAGCGATTTGTAGAACTGATATTTTTATGTTCTAATAAGACGAGCCGCCTCTTCTCAGGCATCATTACTCa < 2:125673/249‑1 (MQ=255) gcTGATGCGCTCAACGCGAAACACAGTCAGTTCACGGAAGCGCAGATAATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCACGCGATTTGTAGAACTGAAATGTCCATAGTCTGATAAGACGAACCGCCTCTTATCAGGCATCATTACTCAACCCCggcagcg > 2:326595/1‑246 (MQ=255) agtcattTCGCGGAAGCGCAGATCATGGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTTTTCATTGTTATCGCTTTC‑TGAATGGTAATCAGAAATATCTAAAAAAACCTCGCAAATGATAATGATTGTAAAGCATGATAAATGCAACCGTTTTGTAGAACTGAAATGTTTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc < 1:371084/251‑1 (MQ=255) ggtTCACGGAAGCGCAGTTTATTGCGATCGCGCTGGGGGGGGGGGGGG‑‑GGT‑G‑TTATTCTTTGTTATCGCCTTCGTTA‑TGGTAATCAGATATATCTAAAAAAAACGCGCAAATGAAAATGATTGTTAATCAGGATAAATGCAAGCGATTGGTAGAACTGATATGTGTATAGTCGGATAAGACGAACCGCCTCTTCTCAGGCATCAGTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgtgt < 2:407034/250‑1 (MQ=255) agtTCACGGAAGCGCAGATCATGGCGAACGCGCTGCGGGGGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGGGA‑TGGTAATCAGATATATCTAAAAAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGAAAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgtgt < 1:213231/251‑1 (MQ=255) ccgaaaGCTCAGATCATTGCGACCCCGCTGCGGGTGGCGGGGG‑‑G‑TTG‑TTATTCATGGTTAGCGCCTTCGTAA‑TGGTAATCAAATATATCTAAATAAACCCCGCAAATGAAAATGATTGTTAATCATGATAAATCCAAGCGGTTGGTAGACCTAATATTTCTATAGTCGGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGAt < 1:419865/247‑1 (MQ=255) aCGGAAGCTCAGATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGTGAt > 2:380169/1‑251 (MQ=255) gcAGATGATTGCGAACGCGCGGCGGGTGGCGGGGG‑‑GGT‑T‑TTATTCATTGTTATCGCCTTCGTGA‑GGTTAATAAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCACGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCAc < 2:86126/251‑1 (MQ=255) gATCATTGCGAACGCGCTGCGGGTGGGGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCAAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAGGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGcatcat < 1:74954/189‑1 (MQ=255) gATCATTGCGAACGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTCAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGcatcat > 2:74954/1‑189 (MQ=255) aTCATTGCGACCGCGCTGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGttt < 1:92089/251‑1 (MQ=255) aTCATTGCGACCGCGCGGCGGGTGGCGGGGG‑‑GGT‑G‑TTATTCATTTTTATCGCCTTCGTGA‑TGGTAACCAGATATATCTAAAAAAAACTCGCAAATGATAATGATTGTTAATCATGAAAAATGCAAGCGATTTGTAAAACTAATTTGTCTATAGTCGGATAAGACAAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGtt < 1:254944/250‑1 (MQ=255) gcTGCGGGTGGCGGGGG‑‑GGT‑G‑TTCTTTATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATATAAATAAAACTCGCAACTGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGCTAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGAGAACGCCTTATCCGGCCTACGGGTGAGGTGAGTCCACGTTTAAAAATCAttttt > 2:306438/1‑250 (MQ=255) ggcgggggg‑‑g‑T‑G‑TTATTCATTGTTATCCCCTTCGTGA‑TGTTAATCAGATATATCTAAAAAAACCCCGAAAATGATAATGTTTTTTAATCATTATAAATGCAAGCGATTTGTAGACCTGATATGTATATAGTCTGATAAGACGAGCCGCCTCTCCTCAGGCATCATTACTCAACGCCTGATTCGGCGTGAACGCCTTATCCTGCCGACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCaa < 1:306438/247‑1 (MQ=255) | ACGCGACGGTGGGCGTGGTCCTTCCGGCCAGACGATGCCCTCTTCCGTTACCGTTGGCGGCACAAAGTGAGCGTCAGGTTGAGGAAAGAAGAGTTTGCTGTGATCGTCAAAGCCACGCGATGTAAAACCGTCCAGCGCCTCGCCGCCGAGGACAATGCGCTGAAAACCGGCGCTGATGCGCTCAACGCGTAACACAGTCAGTTCACGGAAGCGCAGATCATTGCGAACGCGCTGCGGGTAGCGGGGG‑‑G‑T‑G‑TTATTCATTGTTATCGCCTTCGTGA‑TGGTAATCAGATATATCTAAATAAAACTCGCAAATGATAATGATTGTTAATCATGATAAATGCAAGCGATTTGTAGAACTGATATGTCTATAGTCTGATAAGACGAACCGCCTCTTCTCAGGCATCATTACTCAACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTGAGATGAGTCCACGTTTAAAAATCATTTTTACACTTGCAA > NC_000913/3216234‑3216722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |