Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,988,879	0	A	C	30.9%	67.0 / 11.0	42	P126P (CCA→CCC)	yqeI	putative transcriptional regulator YqeI
Reads supporting (aligned to +/- strand):  ref base A (24/5);  new base C (0/13);  total (24/18)
Fisher's exact test for biased strand distribution p-value = 3.36e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAA  >  NC_000913/2988629‑2989124                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                      aaGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCa                                                                                                                                                                                                                                                       <  1:46918/251‑1 (MQ=255)            gATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATaa                                                                                                                                                                                                                                             >  1:335277/1‑250 (MQ=255)                       acaacaAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCgg                                                                                                                                                                                                                                 >  2:187230/1‑251 (MQ=255)                            aaGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTCCCCCCTCGCTAATGGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATAc                                                                                                                                                                                                                            <  1:559678/251‑1 (MQ=255)                            aaGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATCCCCCACCTGCCATAAAAGTTAATGCGGGATa                                                                                                                                                                                                                             >  2:165425/1‑250 (MQ=255)                                     ccACCAGAGTCTGGGAAGAAGAAGGTAGGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTCCCCCCTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGc                                                                                                                                                                                                                   <  1:433227/250‑1 (MQ=255)                                      ccccAGATTCGGGGAAGAAGAAGGTATGCGTGTCCCTACAAACACGTTATATCAAAACATACCCATTAACAA‑ACGCGGATTGCGCGCTGTTGGGAAAACACCCCACTCGCTAATTGCAACCGTCCCGAGAAGAGGATAAAA‑GATCCAAAATGAAATAAACAAACAAAACCATGAAAAAAACTCGGAAAAAGACCCACATACACACAAGGCCCCCCCGGCCATAAAAGTTAATGCGGGATACAAAGAGAGc                                                                                                                                                                                                                   <  2:335277/248‑1 (MQ=255)                                      cACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACCCGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTCCCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACCCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCa                                                                                                                                                                                                                  <  1:382450/251‑1 (MQ=255)                                       cccAGAGTCTGGGAAGAAGAAGGTAGGCGTGTGCCTACTAACCCGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGGGTATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACAGACACGCAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCAt                                                                                                                                                                                                                 <  1:713820/250‑1 (MQ=255)                                         cAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATtg                                                                                                                                                                                                               <  1:733283/251‑1 (MQ=255)                                             gTCTGGGAAGAAGAGGGTATGGGTGTGCCTCCAAACAGTTTATATCAAAACATATCCATTACAAG‑ACGGGGTTTCCGCGCTGTGGGTGATCCTACCCCCTCGATAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATAAAAAATCATGAAATAAACTCGTCAACAGACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATtggtgg                                                                                                                                                                                                           <  2:25959/251‑1 (MQ=255)                                                    aagaagaagGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCaa                                                                                                                                                                                                      >  1:553411/1‑249 (MQ=255)                                                         aaagttATGCGTGTGCCTACTAACCCTTTATAACACAAAATCTCCATTA‑CAGGACGCGGATTTCGCGCTGTGGGTGATCCACCCCACCCGCTAATGGCAACCGTGCCGAAAAGAG‑ATTCAAAGACCCATAATGAAATTAACATAAAAAATCATGTAAAAAACTCGCCAACAGACCCACAAACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAAttt                                                                                                                                                                                               <  2:553411/246‑1 (MQ=255)                                                                           cctaACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAAAAGAGGATTCAA‑GATCCATAATGACATAAACATACAAAATCATGTAATAAACTCGTCAACAGCCGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCaa                                                                                                                                                                             <  1:165425/250‑1 (MQ=255)                                                                                   gTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACAtata                                                                                                                                                                      >  1:575117/1‑250 (MQ=255)                                                                                      atatCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATACATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATaaaa                                                                                                                                                                   >  1:418782/1‑250 (MQ=255)                                                                                              aCATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑AATCCATAATGACATTAACATACAAAATCGTGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAAGCCTCAAACATATAAAAAGTCATCTa                                                                                                                                                          <  1:537900/251‑1 (MQ=255)                                                                                                            aG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAgcgc                                                                                                                                            >  1:399421/1‑251 (MQ=255)                                                                                                                  gggagttCGCGGTGTTGGAGATACTACCCACTCGCTAATTGCAACCGTGCCGAAAAGAGAATTAAA‑AATCAAAAATGACATAAACATACAAAATCATTAAATAAACTCGTCAACAAACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTg                                                                                                                                       <  2:127679/246‑1 (MQ=255)                                                                                                                   gattttCGCGCTGTTGGTGATCCTCCCCCCTCGCTAATTGCACCCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTACCATCAAAAATCATGTAATAAACTCGTCACCAGCCGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTGGAGCGCATTTGt                                                                                                                                      <  1:187230/248‑1 (MQ=255)                                                                                                                                  ggTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTc                                                                                                                       <  1:594376/251‑1 (MQ=255)                                                                                                                                         ctacCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCatat                                                                                                                >  1:176582/1‑251 (MQ=255)                                                                                                                                                  cgataaatGCAACCGGGCAGAGAAGAGGATTAAA‑GATCCAAAAGGACATAAAAAAAAAAAACCATTAAAAAAACCCGACAACAGACCCACATACAAAAAATCCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATgg                                                                                                       <  2:399421/244‑1 (MQ=255)                                                                                                                                                            aaCCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATc                                                                                             >  2:134811/1‑251 (MQ=255)                                                                                                                                                                     gagaAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGc                                                                                    >  2:260080/1‑251 (MQ=255)                                                                                                                                                                        aagaGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATtgg                                                                                                                                                                                                              >  1:40859/1‑126 (MQ=255)                                                                                                                                                                        aagaGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCAt                                                                                 >  1:473807/1‑251 (MQ=255)                                                                                                                                                                         agagGATTCAA‑GATCCATAATGACATTAACATACAAAATCCTGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCAtt                                                                                >  2:355384/1‑251 (MQ=255)                                                                                                                                                                         agagGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCAtt                                                                                >  2:285468/1‑251 (MQ=255)                                                                                                                                                                              atacAA‑GCTCCATAATGACATAAACATACAAAATCATGAAAAAAACTCGTCAACAGACGCACATACACACAATCCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCa                                                                           <  2:176582/248‑1 (MQ=255)                                                                                                                                                                              aTTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTc                                                                            >  1:609504/1‑250 (MQ=255)                                                                                                                                                                              aTTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTc                                                                            >  1:547891/1‑250 (MQ=255)                                                                                                                                                                                     gATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGAtt                                                                     >  2:250161/1‑251 (MQ=255)                                                                                                                                                                                          aTAATGACATTAACATACACAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACa                                                                  >  1:611863/1‑249 (MQ=255)                                                                                                                                                                                                aCATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGtt                                                          >  1:216454/1‑251 (MQ=255)                                                                                                                                                                                                         aaaaaaaTGATGTAATAAACCCGTAAACAACCCCCCACACACACAAGGCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAAtt                                                 <  1:100433/248‑1 (MQ=255)                                                                                                                                                                                                          aCAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAAtt                                                 >  1:680721/1‑250 (MQ=255)                                                                                                                                                                                                             aaaacataaaataaACCCGACAACAGCCACACATACACACAATTCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATg                                             <  1:19888/242‑1 (MQ=255)                                                                                                                                                                                                                          aaCTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGAGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGTATAATAATCAACCGAAGCCATTTTTCACGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTa                                 >  2:30636/1‑250 (MQ=255)                                                                                                                                                                                                                                tCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAAc                          >  1:46289/1‑251 (MQ=255)                                                                                                                                                                                                                                aaaaaaGACGCACACACACAAAAGCCCCCCCCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAAc                          <  2:565810/246‑1 (MQ=255)                                                                                                                                                                                                                                      gACGCACATACACACAATGCCCCACCTGCCATAAAAGTTCATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACaga                       >  1:476410/1‑248 (MQ=255)                                                                                                                                                                                                                                                           ccACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGaa  >  2:10768/1‑248 (MQ=255)                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                      AAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAG‑ACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAA‑GATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAA  >  NC_000913/2988629‑2989124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑