| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,014,019 | 0 | A | G | 29.8% | 139.3 / 11.9 | 67 | E254G (GAA→GGA) | pqiB | intermembrane transport protein PqiB |
| Reads supporting (aligned to +/- strand): ref base A (4/43); new base G (20/0); total (24/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGT > NC_000913/1013770‑1014268 | cGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGaa < 2:336862/251‑1 (MQ=255) ggTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TGGGCTTTTATGTGGCGGGAggggtgggttttt > 1:71790/1‑240 (MQ=255) tcTGTTCCGTGGCTATCGGGTAGGGTCGGGTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCAGCAATGCACCTTATGACCGACTGGTGACCAACAATTTTCGCGTCTGGAAAGATAGTGGCATTGCGGGTGAGCTGACGTCAGCAGGGACGCGGGTGGAGATGGGCTCATTGACAACTCTGCTAAGTGGTGTTC‑TCAGCGTGGATGTGCCGTAAGGTCTGGATTTAggg < 2:735651/249‑1 (MQ=255) gCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCCCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑GGAGCTTTGTTGTGGCGGGAgggtggggtttttggg > 1:328409/1‑237 (MQ=255) gCTGTTCCGTGGCTATAGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑GCAGGTTTTATGTGGCGGAAGGGCTGGGtttttggg > 1:224219/1‑246 (MQ=255) ccGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑a < 2:431629/250‑1 (MQ=255) tATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑GCCGGTTTGTTGTGCCGGGAGGGCTGGCTTTTggggaggccgtgggacc > 1:446815/1‑237 (MQ=255) gTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGc < 1:634139/228‑1 (MQ=255) ggTTGAAACCAGCACCTTCGATACACAAAAACTCAAGATCAGCTATCAACTGTTCAGCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCAAAAACAGCTTTCg < 2:672109/251‑1 (MQ=255) aaaCCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCTCCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTg < 1:33106/251‑1 (MQ=255) aCCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCCGCTTTTATGTGGCGGGGGGGCTGGGTTTTGGGGCGCC‑AGTGG‑GGCCGAAAAAAGCTTTCGTTTTGtt > 1:606941/1‑250 (MQ=255) aCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGTCGGTTTTG‑TGTGGGGGGAGGTCTTGGTTTTGGGCAGCC‑CGTGG‑CAACGGAAAAAACCTTCGTTTTGTatggtg > 1:487513/1‑247 (MQ=255) aCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGAG‑TCAGCTTTGTTGTGCCGGGAGGGCTGGGTTTAGGGCAGCC‑AGGGG‑GACCGCAAACAGCCTTTGTTTTGTatgatg > 1:158719/1‑250 (MQ=255) tCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATc < 2:71790/249‑1 (MQ=255) acaAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACAGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGGTTTTTTATGGCGGGAGGGCTGGGGTTTGGGCAGCA‑CGTGG‑AGCCGGAAACAGCTTTCTGTTTGTGTGTTGATCAGAAGAGc > 1:289606/1‑250 (MQ=255) aaaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TTCGCTTTGTTGTGCCGGGAGGGCTGGGTTTTGGGGAGCC‑AGGGG‑GACCGGAAAAAGCTTTTGTTTTTTATGATGATCAGAAGAGCAtt > 1:245046/1‑251 (MQ=255) aaaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCCTTTATGTGGCGGGAGGGCTGGGTTTTTGGGAGGC‑CGGGG‑GACCGAAAACAGATTTTGGTTTTTTTGATGATCAGAAGAGCagt > 1:523867/1‑249 (MQ=255) aaaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑TGCGCTTTTTTGTGTCGGGAGGGCTGGGTTTTGGGCAGGC‑CGTGG‑CACCGAAAACAGATTTTGTTTTGTATGGTGATCAGAAGAGCAtt > 1:517858/1‑251 (MQ=255) aCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCAGTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAgg < 2:487513/251‑1 (MQ=255) cAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑TCCGCTTTTATGTGCCGGGAGGGCTGGGTTTTGGGCAGCC‑CGGGG‑CACCGCAAACAGCTTTCGTTTTGTATGATTATTAGAAGAGCATTCAGGAtt > 1:370714/1‑251 (MQ=255) cAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGGTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAACTTTGATGTGCCGGAAGTTCTGGATTGAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGt < 1:478604/251‑1 (MQ=255) gCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTac < 1:105107/251‑1 (MQ=255) gCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCGGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTac < 2:729266/251‑1 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGGCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTGCGTGTTGTATGAGGATCAGAAGATCATTCAGGATTCGTTGTacac < 2:328409/250‑1 (MQ=255) gTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTTTTTTGCCGGGAGGGCTGGGTTTTGGGGGGCC‑CGGGG‑GGCCCCAAAAAGCTTTCGTTTTTTATGGTGATCAGAAGAGCACTTAGGGTTCTTTGTTCACCGAGcac > 1:37750/1‑250 (MQ=255) gTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATcac < 1:409037/250‑1 (MQ=255) tcaATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCCGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCCGCTTTGTTGTGCCGGGAGGTCTGGGTTTTGGGCAGCC‑CGGGG‑GGCCGAAAAAAGCCTTCGTTTTTTTTGATGATTAGAAGAGGATTCACGATTCGTTGTACACCGCTCACATTGAt > 2:623263/1‑251 (MQ=255) ccgtATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGGCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGAt < 2:637690/248‑1 (MQ=255) aTGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTc < 1:122584/251‑1 (MQ=255) aTGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGGACACCGATCACATTGATTATCTGATGtt < 1:195552/250‑1 (MQ=255) aTGACCGACTGGTGACCAACAATGTGCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGtt < 1:722270/250‑1 (MQ=255) gACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATCATGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑TTAGCTTTGATGTGCCGGGAGGGCTGGGTTTAGGGGAGAC‑AGGGG‑GACCGGAAAAAACTTTCGGTTTGTATGATGATCAGAAGAGCAATCAGGATTTGTTGTACACCGCACACATTGATTTTCTTATGTTCtt > 1:466843/1‑251 (MQ=255) gACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCt < 1:574815/250‑1 (MQ=255) aCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGCGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGG‑GCAGCTTTTATGTGTCGGGCGGTCTGGGTTTAGGGCCGCC‑CGGGG‑CGCCGCAAAAAGCTCTCGGTTTTTTTGTTTATTAGAAGAGCATTCCGGATTCTTTGTACACCGCTcaccttttgtatcttgtgtttttt > 2:604131/1‑230 (MQ=255) aCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTTATGTGCCGGAAGGGCTGGATTTTGGGCCGCCCAG‑GG‑GACCGACAAAAGCTTTTGTTTTGTATGATGATTAGAAGAGCATTCAGGGTTCTTTGTACACCCGCCACATTGATTATTTGATGTTCttt > 1:342543/1‑251 (MQ=255) gACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTTTTGTGCCGGGAGGGCTGGGTTTTGGGCAGCC‑CGGGG‑GACCCAAAACAGATTTTGTTTTTTATGATGATCAGAAGAGCAATCAGGATTTGTTGTATACCGATCACATTGTTTATTTGATGTTCttttaaaatttgg > 1:694886/1‑241 (MQ=255) aCCAACAATGTTCGCTTCTGTAAAGATAGGGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGt < 2:214524/251‑1 (MQ=255) caacaaTGTTCGCTTCTGGAAAGATAGTTGCAGTGCGGTTAGTCTGACGTCAGCAGGGATGCGGGTGGCGATTGGCTCATTGACAACTCTGCTGAGTGGCTGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCATCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCTGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAATATTCGGTAc < 2:594624/251‑1 (MQ=255) aTGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGt < 1:664059/251‑1 (MQ=255) gTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTc < 2:694886/250‑1 (MQ=255) aGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGGTTTGATGTGCCGGGAGGGCTGGATTTAGGGCAGCC‑AGGGG‑CACCGAAAAAAAATTTTGTTTTGTTTGATGTTCAAAAGAGCATTCAGGATTTGGTGTTCACCCGTCAAATTTATTATCTGGTGTTTTTTTAAAAATCGGTTCGCGGGCTGCAAAC‑CGGAGGTCCggg > 1:259954/1‑250 (MQ=255) gCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTagag < 2:370714/251‑1 (MQ=255) gACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTAtt < 1:469057/247‑1 (MQ=255) gACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGcc < 2:158309/251‑1 (MQ=255) gACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑GCCCCTTTTATGTGCCGGGCGGGCTGGGGTTTTGGCGGCC‑CGTGG‑GCCCCAAAAAAGCTTTCGTTTTGTTTGTTGATCAGAAAAGCATTCCGGAGTCGGTGTACACCCATCACATTGTTTTTTTGCTGTTTTTTTTAGATTCGTGGCGCGGTGTGCCACC‑GGGGGCTCCGGGCGGGTTCCggggggttccgc > 2:273566/1‑243 (MQ=255) tCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGGGCCGGGAGGGCTGGGTTTAGGGCAGCC‑CGGGG‑CACCGGAAAAAGCTTTCGTTTTGTTTGATGATTAGAAGAGCATTCAGGATTCGTTTTACACCCCTCACATTGATTATTTGGTGTTTTTTTAAAATTCGGTACGCGGGCTGCAACC‑CGGGGCCCCGGGAGAGGTCCGGGGGATTTGCCTggg > 1:536391/1‑251 (MQ=255) cagGGATGCGTGTGGAGATGGGCTCAGTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTAcc < 2:323680/251‑1 (MQ=255) ggAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTg < 1:663449/250‑1 (MQ=255) ggAGATGGGCTCATTGACAACGCTGCTGAGGGGCGGTG‑GCAGCTTTGATGTGCCGGAAGGTCTGGATTGAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCGGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAATCAAAGTg < 2:289606/250‑1 (MQ=255) agaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCa < 1:111863/251‑1 (MQ=255) gaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAt < 1:131313/251‑1 (MQ=255) gggCTCATGGACAACGCTGCTGAGGGGCGGTG‑TCAGCTTTGAAGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATGCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTc < 2:392955/250‑1 (MQ=255) gCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCttt < 2:523867/251‑1 (MQ=255) gCTCATTGACAACGCTGCTGAGTGGCGGTG‑ATAGATTTCTTGTGCCCGGAGGGCTGGAGTTTGGGGAGCC‑ACTGGGAACCCAAAA‑AGCTTTTGTTTTGTTTGAAGTTTAGAAAAGCAATCTGGATTCGTTTTACACCGATCACATTTATTATCTGATGTTTTTTTTAAATTTGGTACCCGGTCCGCAACCCGGGGGC‑CCGGGGGAGGTTCGGGGGATTCGCCTTGGGAACGTAAGCAAAgagaccatcttt > 2:659933/1‑240 (MQ=255) cATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTgc < 2:415682/250‑1 (MQ=255) cATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTgc < 2:37750/250‑1 (MQ=255) ggCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACAtt < 1:604131/251‑1 (MQ=255) ggTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTGTGCGCCGAATATGCGTCAGACATTTaa < 1:623263/251‑1 (MQ=255) cAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACgatg < 2:224219/251‑1 (MQ=255) cAGCTTTGATGGGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATGCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCATACATTTAACgat < 2:533419/250‑1 (MQ=255) gCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACTCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCTCCGAATATGCGTCAGACATTTAACgatgat < 1:69150/251‑1 (MQ=255) gCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACgatgat > 2:729420/1‑251 (MQ=255) tGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTAc < 1:567045/250‑1 (MQ=255) gATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAGAACAGCTTTCGGTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGGACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAGTCTATGCGCCGAATATGCGTCAGACATTTAACGATGATTAcc < 2:632282/250‑1 (MQ=255) gtgCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGGTCTGTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTAGTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTGAACGATGATTACCGTAt < 2:446815/251‑1 (MQ=255) gCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATGACCGTAtt < 1:561365/250‑1 (MQ=255) cGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCACAAGAGCAATCAGGATTCGTTGTACACCGATCACATTGAGTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTCCAACC‑GGGAGCTCCGGTAGAGTTCCCGGGTATTCGCCGGGCTAGCGTAATCAAAGTGCCATTCCTTGCGCCTAATATGCGACAGACATTTAACGATGATTACCGTATTCCg < 1:123012/251‑1 (MQ=255) ggAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCgg > 2:543116/1‑251 (MQ=255) aaGGTCTGGTTTTAGGGCAGCC‑AGTGG‑CACCGACAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGt > 2:51708/1‑250 (MQ=255) | CGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTG‑TCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCC‑AGTGG‑CACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACC‑GGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGT > NC_000913/1013770‑1014268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |