| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,486,386 | 0 | G | A | 25.4% | 108.9 / 12.4 | 60 | A89A (GCG→GCA) | crp | DNA‑binding transcriptional dual regulator CRP |
| Reads supporting (aligned to +/- strand): ref base G (36/8); new base A (0/15); total (37/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.23e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTC > NC_000913/3486137‑3486630 | gCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCg > 1:26943/1‑250 (MQ=255) aaaCAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGaa > 2:488157/1‑250 (MQ=255) gACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATCAGTACCCATCCAAGAGCACGCTTATTTTCCAGGGCGAAACAGCGAAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGCTCAAAGACGACGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTCTTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCCTG‑GGT‑ACGTGCGAAAACCGc > 1:99162/1‑251 (MQ=255) ttGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCCCCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTc > 1:594898/1‑251 (MQ=255) gTCTCATTGCCACATTTATACATAACCATCCAAGAGAACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATAGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGACGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGAGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGCAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGt > 2:563487/1‑251 (MQ=255) aaaggccccaccaaaGAACACGCTTATTC‑CCAGGGGAAAAAAGGGGAAACCGCTGTACAACAT‑GTTAAAAGG‑CTCGGTGGCGGTGCTGAAAAAAGACGAAGGGGGAAAAAAAAGGACCCTCCCCTTTCAAAACCGGGGTAATTTTATGGGAGA‑CGGGGCCCTTTTTAAAGAGGGCAAGAAATGTAGCGCTTG‑GGT‑ACGGGAAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAAt < 2:425908/238‑1 (MQ=255) agtccccATCAAAGAGCACGCTTATTCACCAGGGTGAAAACGCGGACAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATACTCTCCTATCTGAATCAGGGTGATTTAACTGGCGAACTGGGCC‑TGGTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTCCGCCAAtt > 1:370767/5‑250 (MQ=255) aGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTCTCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGAACAAAAAATTTCGCCAATTg > 1:370764/1‑251 (MQ=255) ccccacccaAGACCACGTTTATTCCCCAGGGTGAAAAAGCGAAAAC‑CCTTTACTCCATCTTTAAA‑GG‑CTTTGTGGCATTGCTGATAAAAGACGAGGAGGGTAAAGAAATGACCCTCTCCTATCTGAAGCAGGGTGATTTTATTGGCAAACTGGTCC‑TGTTTGAAGAGGGCTAGTAACTTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAt < 1:447324/249‑1 (MQ=255) cacccAAGAGACCGCTTATTCACCAGGGGAAAAAAGCGGAAAC‑GCTGTACTACATCGTAAAA‑GG‑CTTGGTGGCAGTGCTGATCAAAGACAAAGAGGGTAAAAAAATGACCCTCTCCTATCTAAATCGGGGTGATTTTATGGGCGAACTGGGCC‑TGTTTAAAGAGGCCAAGGAACGAAGCGCTTG‑GGT‑ACGTGCGAAATCCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAg < 1:324050/248‑1 (MQ=255) cATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTCAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTc > 2:502908/1‑249 (MQ=255) atcaaagcgCACGTTTATTCACCAGGGTAAAAAAGCGGAACC‑GCTGTACTACATCTTAAAA‑GG‑CTCTGTGGCAGGGCTGATCAAAGACAAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAATTGGGCC‑TGTTTGAAGAGGGCCGGAAACGTAGCGCATG‑GGT‑AGGGGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTTCAAAAAATTTCGCCAATTGATTCAgg < 1:179934/243‑1 (MQ=255) gagCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAAcc > 1:196492/1‑251 (MQ=255) gCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCg > 1:467800/1‑251 (MQ=255) cACGCTTATTCACCCGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAAACGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAAACCgg > 2:67179/1‑251 (MQ=255) cACGCTTATTCACCAGGGTGAAACAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCCGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCCGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGCAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCgg > 2:222360/1‑251 (MQ=255) ccgatcacagggaaaaaaaGCGGAAAC‑GCTGTACTACATCGTTAAG‑GG‑CTCTGTGGCAGTGCTGATAAAAGACGAGGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGTTTTTATGGGCGAACGGGGCC‑TTTTTAAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTc < 1:62325/237‑1 (MQ=255) cAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTc > 2:62325/1‑244 (MQ=255) tGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGt > 2:119320/1‑251 (MQ=255) gAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTc > 1:113113/1‑251 (MQ=255) aaaGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGc > 2:548889/1‑251 (MQ=255) gCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGcacc > 2:504679/1‑250 (MQ=255) aaaC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCCAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATg > 2:473613/1‑251 (MQ=255) aC‑GCTGTCCTACATC‑TTAAA‑GGTCCCTGTGGCATTGTGGAAAAAAGAGGAAGAGGTAAAAGAAATGATCCTCTCCTACCTGAATCAGGGTTATTTTATTGGCGACCGGGGCC‑GGTTTGAAGAGGGCCAGAAACGTAGCGCAGG‑TAT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGgc < 2:496068/251‑1 (MQ=255) gCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGt > 1:45340/1‑168 (MQ=255) actacATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGAGCAAAGACGAAGAGGGTAAAGAAATGATCGTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAAATGGGCC‑TGTTTGACGAGGGCCAGGAACGAAGCGCATG‑GGA‑ACGGGCGAACTCCGCATGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGGAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGcgtcgt > 2:284874/1‑251 (MQ=255) tAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTcc > 1:30123/1‑250 (MQ=255) aaa‑GG‑ATCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCACGTCAc > 1:446374/1‑251 (MQ=255) aggg‑CTCTGTGGCAGTGCTGATAAAAGAGGAAGAGGGAAAAAAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGGAAACTGGGCC‑TTTTTGAAGAGGGCAAGGAACGTAGCGCAGG‑GGT‑ACGTGAAAAAACCGCCTGTGAAGTGGCTGAAATTCCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACt < 1:450490/249‑1 (MQ=255) g‑CTCTGTGGCAGTGATGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCACTTGATTCAGGTAAACCCGGAc > 2:251508/1‑200 (MQ=255) gctcgggggCAGGGCGGATCAAAGACGAAGAGGTAAAAAAAATGACCCCCCCCTACCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTGGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACTTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGAc < 1:251508/193‑1 (MQ=255) ctGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCag > 1:359596/1‑249 (MQ=255) ctGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACAGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTAAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCag > 1:407965/1‑249 (MQ=255) gCAGTGCTAATAAAAGACGAAGAGGTAAAAGAAATGACCCTCTCCTATCTGAATCGGGGTGATTTTTTTGGCGAACTGGGCC‑TGTTGGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGGGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGt < 1:90979/251‑1 (MQ=255) cAGTGCTGATCAAAGCCGAAGAGGGTATAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTg > 1:462266/1‑251 (MQ=255) ggtgcgaaaaaaaGACGAAGGGGGAAAAAAAATGTCCCTCTCCTACCTGAATCAGGGTTTTTTTAGTGGGGAACGGGGCC‑TGTTAGAAGGGGCCCAGAAACGTAGCGCAGG‑GGT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGGTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTgg < 2:530495/241‑1 (MQ=255) cAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTTGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATg > 2:431993/1‑208 (MQ=255) cAAAGACGAAGAGGGTAAAGAAAGGACCCTCTCCTATCTGAATCAGGGTGATTTTATGGGCGAACGGGGCC‑TGTTGGAAGAGGGCCAGGAACGTAGCGCAGG‑GGT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTTGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATg < 1:431993/208‑1 (MQ=255) gaagaggtaaaagaattgtcccTCTCCTTTCTGAATCGGGGTTATTTTAGTGGCGAACGGGGCC‑TGTTTGAAGAGGGCAGGGAACGGAGCGCATG‑GGT‑ACGTGAAAAATCCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCt < 2:318106/231‑1 (MQ=255) ggaaaagaaaagaTACTCCCCTATCGGAATCGGGGGTATTTTATTGGGAAACGGGGCC‑TGTTGGAAGGGGGCAAGGAACTGGGCGCGGG‑GTT‑ACTTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAAGTTCGCCAATTGTTTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGt < 2:339670/248‑1 (MQ=255) tCCTCTCCTATCTGAATCAGGGTGCTTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAtt > 2:257818/1‑251 (MQ=255) tCCTCTCCTATCTGAATCAAGGTGATTTTATTGGCGAAATGGGCC‑TGTTTGCAGAGGGCCAGGAACGTACCGCATG‑GGA‑ACGTGCGAAACCAGACTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCAAATTGATTCAGGTAACCCCGGACATTCAGATGCGTTTGTCTGAACAGATGGCGCGGCGTATGCAATCCACTTCAGAGAAAGAGGGCAAACTGGCGTTCCTCGACGTGACGGGCGGCAtt > 2:532609/1‑251 (MQ=255) ccTCTCTTAGCTGAATCAGGGTGATTTTATTGGCGACCGGGGCT‑TTTTTGAAGAGGCCCAGGAACGGAGCTCATG‑GGT‑CCGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAtt < 1:355250/250‑1 (MQ=255) ctctCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGCCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAACACCGCCTGTGAAGTGGCTGAACTTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGc > 2:271494/1‑251 (MQ=255) ctcCTATCTGAATCAGGGTGATTTTATTGGCGCACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGACATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTCACGGGCCGCATTGca > 2:282573/1‑250 (MQ=255) cctatatgaacaaGGGTGGTTTTATTGGCGCAGTGGTCC‑TGTTGTAAGAGGTCCAGGAACGACGCGC‑TG‑GGTGTCGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAg < 2:446374/239‑1 (MQ=255) aTCAGGGTGATTTTATTGGCGACCTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgctg > 2:532219/1‑251 (MQ=255) gATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGc > 2:578838/1‑251 (MQ=255) gttgggggCA‑TGTTTGAACGGGGCCAGGATCGTGGC‑CCTGCGGT‑ACGCGCGAAAGCCGCCTTTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGTTTCCGGTAAACCCGGACAGTCTGATTCGTTTGTCTGCACAGATGGCTCCTCGTCTGCAAGTCACTTCGTAGAGAGTTGGCAACCTGGCGTTCCTCGACATGATGGGGCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGa < 1:594765/246‑1 (MQ=255) ggggCC‑TTTTAGAAGAGGGACAGGAACGTAGCGAATG‑GGT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCt < 1:123137/250‑1 (MQ=255) gggCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCt > 1:412478/1‑250 (MQ=255) ggggCCAGGAAGGTAGCGCAGG‑GGT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGAc < 1:578838/250‑1 (MQ=255) aaggaaggtggcgctgg‑ggT‑ACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTAt < 1:257818/235‑1 (MQ=255) agaagtgtgcggcATG‑GGT‑ACTAGCAAAAACCGCCTCTGAAATGGCTGAAATTTCGTACAAAAAATTGCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCTTTTGTCTGCACAGATGTCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGCTCCCCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAGGACTCACCCGGACGGTATg < 2:177213/240‑1 (MQ=255) aggTAGCGCTGG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCaaa < 1:119320/249‑1 (MQ=255) acgtacggcATG‑GGC‑AAGTGCCAAAACCGCCTGTGAAGCGGCTGACATTTCGTCCAACCAATTTCGCCAATTGATTCAGGTAAACACGGCCATTATGATGCGCTTGTCTGCACAGATGGCGCGTCGTCTGCACGTCACTTCAGAGAATGTGGGCCACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACCGACTCTGCTGCATCTGGCAAAAACACCAGCCGCTATGACCCACCCGTACGGTATGCaa > 2:267591/8‑250 (MQ=255) acatggcgagtG‑GGT‑CCGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCATAGAAAGTGGGCAACCTGGCGTTCCGCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCaaa < 2:30123/241‑1 (MQ=255) cgcATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCaaa > 1:187903/1‑250 (MQ=255) gaccgtgggacagggagAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAAGTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCaaa < 2:412478/235‑1 (MQ=255) gT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCg > 1:122243/1‑251 (MQ=255) tcGTGCGAAAGCCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATGACCCGt < 1:129205/249‑1 (MQ=255) gTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAACTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCACGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTc > 2:588202/1‑249 (MQ=255) | GCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAAC‑GCTGTACTACATCGTTAAA‑GG‑CTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCC‑TGTTTGAAGAGGGCCAGGAACGTAGCGCATG‑GGT‑ACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTC > NC_000913/3486137‑3486630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |