Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	689,450	0	T	G	41.7%	35.7 / 11.6	37	T478P (ACC→CCC)	lnt	apolipoprotein N‑acyltransferase
Reads supporting (aligned to +/- strand):  ref base T (16/5);  new base G (11/4);  total (28/9)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGC  >  NC_000913/689213‑689692                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                       tGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATGCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCTCGATAAGAAGGGAGTATTTACGTCGCTGACGCAGACTCAGCAACACATCAGCAAAACCAAA‑CAATGCCG‑TCTGCACCCACATCGTTCGGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCAc                                                                                                                                                                                                                                         <  1:357395/250‑1 (MQ=255)         ataACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGt                                                                                                                                                                                                                                >  1:478024/1‑251 (MQ=255)          taACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATAGTTCTCCGGCTAATGCACTGATGACGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGtt                                                                                                                                                                                                                               >  1:234967/1‑251 (MQ=255)              aaaGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAaca                                                                                                                                                                                                                           <  2:153427/251‑1 (MQ=255)                         tgtgCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTg                                                                                                                                                                                                                >  2:55875/1‑251 (MQ=255)                             ccAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGTGATGCATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAACCCAAA‑CAATGTCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATTGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACt                                                                                                                                                                                                            <  1:26799/251‑1 (MQ=255)                                                   tGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTAAG‑TC‑CGGGGGG‑T‑GGCG‑TCACCTTAATGGTTAAAACCTCGCGGGTGAACTGCGGGATCCTCGCCTGaaatt                                                                                                                                                                                       >  2:38518/1‑247 (MQ=255)                                                       aTCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGT‑AGATC‑CGGGGGTTC‑GCCG‑TACCATTA‑AAGTAAACACCTCGCGGTCGAACTGCGGGATCATCGCTTGAA‑TCTGAccc                                                                                                                                                                                 >  2:307487/1‑251 (MQ=255)                                                                 tGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTAAG‑TC‑TGGGGGG‑C‑GGCG‑GCACGTTAATGGTTAACACCTCGCGGGAGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCa                                                                                                                                                                        >  2:586231/1‑250 (MQ=255)                                                                  gCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGG‑C‑GGCG‑GCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCaa                                                                                                                                                                       >  2:356690/1‑250 (MQ=255)                                                                            cGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGACGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGG‑C‑GGCG‑TCACGTTATAGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGACTGAA‑TCTCACCCTGCGGGCCAATAACCGCCGt                                                                                                                                                             >  2:364205/1‑250 (MQ=255)                                                                                        gCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGG‑C‑GGCG‑GCACGTTTGCGGATAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCAACATGCGGGCCAATCACCGACGGAATGCCGttgttg                                                                                                                                                >  2:336296/1‑251 (MQ=255)                                                                                                        gagtttttcgggCACGAAAAGAAGGGATTTTTTCGGTCGCTGACGCAGACCCACCAACCCGGC‑GGAAAACCAAAACAA‑GCCGGTCGGCCCCCACAGCGGCCGGTTGCCGGTAGGGGCGTGTGGGGTGGG‑TC‑CGGTGGG‑G‑GGCG‑TCACGTTAGTGGTTACCCCCCCGCGGGTGACCTGGGGGAGCATCGCGTGAA‑CCTCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTg                                                                                                                                <  2:288798/241‑1 (MQ=255)                                                                                                                 cGGCACGATAAGAAGGGATTATTTACGGCGCTGACGCAGACCCACCAACACAGCAGCAAAACCAAA‑CAAGGCCG‑CCACCCCCCACAGCGGCCAGTTGCCGGTACGTGCTTATGGTGTGAG‑CC‑CGGGGGT‑C‑GGCG‑TCACGTTAGTGGTTAACCCCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCa                                                                                                                       <  1:131553/251‑1 (MQ=255)                                                                                                                             aagGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGG‑C‑GGCG‑GCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCAGCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGCAATGCCGTTGTTGGTGCTTCGCAACAGTGGGCGCGCCAGCTCCAGcgcac                                                                                                           >  2:480088/1‑251 (MQ=255)                                                                                                                             aagGGATTATTTACGCCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcac                                                                                                           >  1:127660/1‑251 (MQ=255)                                                                                                                              agGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGT‑AGATCTCGGTGGC‑C‑GCCG‑T‑ACGATTGAGAATAACACATCGCTGGGGAACTGCGGGATCCTCGCATGAA‑TCTAACCCTGCGGGCAAATCACCGCAGACAGGCCGATGGTGGTGCTGCTCAACCGAGGACGCGCCAgtg                                                                                                                    >  2:337974/1‑239 (MQ=255)                                                                                                                                                     cagactacacaacaaaacagcaAACCCAAA‑TAAGGCCG‑TCGTCACCCACGGCGGCCATTTGCGGGTCGGTGCTTATGGTGTGGG‑TC‑TGGGGGG‑C‑GGCG‑TCACGTGAGTGTTTAACACCTCGCGGGGAAACTGGGGGTTCTTCGCCTGAA‑TCTCCCCTTGGGGGCAATTCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGtt                                                                                   <  1:480088/234‑1 (MQ=255)                                                                                                                                                           catcaACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGT‑AGATCTCGG‑GGG‑C‑GGCG‑GCACGTTTGTGGTTAACAACTCGCGGGTGAACTGAGGGATCAACGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCCACAGCGCACGCATTCGCGCCATCTGGAAGGGTTGCCATg                                                                             >  2:452670/1‑251 (MQ=255)                                                                                                                                                              caACACAGCAGCAAAACCAAA‑CACTGCCG‑TCAGCCCACACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGT‑C‑CGCG‑TCACGCTAGCGCTTAACACCTCGCGGGTGAACTGCCGGCTCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGAAATGCCGTTGTTGGTGCTCAGCAACAGTGGCCGCGCCCGCTCCCGCGCACACATTCGCGCCCTCTGGCAGTCATCCCATGGAc                                                                          >  2:64883/1‑251 (MQ=255)                                                                                                                                                                         caAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGAttt                                                                >  1:7690/1‑250 (MQ=255)                                                                                                                                                                          aaaaCCAAA‑CACTGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGG‑C‑GGCG‑TCCCGTTAGCGGTTAACACCTCGCGGGAGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGAATTCCCGCCATCTGGAAGTGTTGCCATGGACCAACAGATTTAc                                                              >  2:379889/1‑251 (MQ=255)                                                                                                                                                                           aaaCCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTAcc                                                             >  1:261585/1‑251 (MQ=255)                                                                                                                                                                             aCCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCa                                                            >  1:198674/1‑250 (MQ=255)                                                                                                                                                                                aaa‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAAcc                                                        >  1:88102/1‑251 (MQ=255)                                                                                                                                                                                 aa‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAAcc                                                        >  1:46120/1‑250 (MQ=255)                                                                                                                                                                                 aa‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAAcc                                                        >  1:119935/1‑250 (MQ=255)                                                                                                                                                                                      aTGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGG‑C‑GGCG‑GCACGTTAGAGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGcc                                                   >  2:125970/1‑250 (MQ=255)                                                                                                                                                                                          cG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGGGGG‑C‑GGCG‑GCACGTTAGAGGATAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCCCCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGCAGTGTTGCCATGGACCACTAGCTTTACCAAACCACGCATCGt                                               >  2:15553/1‑251 (MQ=255)                                                                                                                                                                                                   cccACGGCGGCCAGTGGCCGGTAGGTGCGTATGGTGTGAG‑‑C‑CGGGGGT‑CCGGCG‑TCACGTTGGTGGTTACCGCCTCGGGGGTGAGCGGGGGGCTGGCCGCCAGAA‑TTGCGCCCTGCGGGCCAACGGCCGCCGTAATGCCGTTGTTGGTGCTGCGCAGCAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCAGGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATa                                       <  1:55875/251‑1 (MQ=255)                                                                                                                                                                                                   cccACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGT‑AGATC‑CGGGGGG‑C‑CGCGGTATCATTA‑AGGATAACAACTCGCGGGTGAACTGCGGGCTCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGAAACAGTGGGCGCGCCAGGTCCAGCGAACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGAt                                        >  2:579115/1‑250 (MQ=255)                                                                                                                                                                                                           ggCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCCCGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCAACCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTcagc                                 >  1:383014/1‑249 (MQ=255)                                                                                                                                                                                                               aGTTGCCGGTACGTGCGTATGGTGTGGG‑TC‑CGGGGGG‑C‑GGCG‑TCATGTTAGAGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGGAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCCTCGTTGGAGATAGTCAGCAGAt                             >  2:318612/1‑249 (MQ=255)                                                                                                                                                                                                                gTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑TGGTGGG‑C‑GGCG‑TCACGTTAGAGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGAGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGt                          >  2:30545/1‑251 (MQ=255)                                                                                                                                                                                                                      ggtgcGTGCTTATGGTGGGAG‑TC‑CGGGGGT‑C‑GGTG‑TCACTTGAGTGGTTACCACCGCGGGGGTGATCTGGGGGATAATCGC‑TGAAATTCCCCCCGGGGGGCCAATCGCCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTGCCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTAt                    <  1:586231/247‑1 (MQ=255)                                                                                                                                                                                                                          cgtgcttatgggtggAG‑TC‑CGGTGGT‑C‑GGCT‑TCAGGTTAGGGGTTACCCCCTCGGGGGTAAACTGGGGGATCACCGCCGGAA‑CCGCCCCCGGCGGGCAAAACCCCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCgg                <  1:364205/237‑1 (MQ=255)                                                                                                                                                                                                                                        gAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATcgc  >  1:177764/1‑251 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                       TGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAA‑CAATGCCG‑TCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAG‑TC‑CGGTGGT‑C‑GGCG‑TCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAA‑TCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGTCAGCAGATAGTCGGTATCCGGGCGGAAGTTATCGC  >  NC_000913/689213‑689692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑