| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 343,444 | 0 | A | G | 26.7% | 129.0 / 14.4 | 60 | G187G (GGA→GGG) | yahK | aldehyde reductase, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (4/40); new base G (16/0); total (20/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCT > NC_000913/343200‑343693 | actGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACatat < 1:100907/250‑1 (MQ=255) cacaTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGC‑CGGGGCATATtggggttt > 1:312338/1‑246 (MQ=255) aTGACCGGACCCTATAACTCTCCGCCGCCTGACGACCCGGTCCTTACTCTGGCCGGCTACGCACAACAGATCGTCGTTCATGAGCGATATGTACTGGGTATTCGTCACCCGCAAGAGCAGCGTGCGGCGGTGGCGCCTTTGTTGTGTGCAGGGATCCCCACGT‑ATTCGCCGCTTCCTCACTGGCAGGCCGGGCCGGGTATAAAAGTGTGCGTTGTCGGCATCGGCGGTC‑TGGTACATATGGGGATTAAGcg < 2:531829/251‑2 (MQ=255) gACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGC‑TGGGAGATATTGGGGTTAAGGTgg > 1:515991/1‑251 (MQ=255) aCCGGCACCTATACCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGGAAAAAAGTGGGCGTGGGCGGGATTGGCGGGCGTGGGACATGTGGGGTTTagcgggg > 2:552674/1‑245 (MQ=255) cGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGTCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGccc < 1:517962/251‑1 (MQ=255) gCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGTCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCAc < 1:504840/251‑1 (MQ=255) gCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCAc < 1:8108/251‑1 (MQ=255) gCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGAGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCAAATggggggttaaccggccccc > 1:398515/1‑236 (MQ=255) cccTATAACTCGCCGACGCCGGGCGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTTCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGTCGTGGTCGGTATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCAcgc < 1:43984/250‑1 (MQ=255) cccTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCGGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCAcgc < 2:35735/250‑1 (MQ=255) ataACCCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGAt < 2:319506/250‑1 (MQ=255) gAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGC‑TGGGGCATATTGGGGTTAAGCTGGGCCCCGCGGTggggggaccagtggggggctt > 1:163674/1‑235 (MQ=255) aTACGCTGGGCGGCTACTCACAACAGATCTGCGTTCAGGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCt < 2:26193/251‑1 (MQ=255) ctGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGGTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑Ag < 1:266706/249‑1 (MQ=255) gggCGGCTCCTCACAACAGATCGTCGTTCATGAGCGTTATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGGTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCaa < 2:301673/251‑1 (MQ=255) gggCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGc < 1:162984/249‑1 (MQ=255) gggCGGCTACTCACAACAGAGCGTCGTGCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGGGGCTCCTTTGTTGTGGGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TTGGACATATGGTGATTAAGCTGGTCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGc < 2:354423/249‑1 (MQ=255) ggcggcTACTCACAACAGATCTTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTGGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCa < 2:192489/238‑1 (MQ=255) ggcggcTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TTGGGCATATGGGGGTTAAGCTGGGCCACGCGGGGGGGGGACC‑Tgtggggggctttacccaggtcgggagg > 1:192489/1‑226 (MQ=255) ggcggcTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCaaa < 1:592688/251‑1 (MQ=255) aCTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGaa < 1:588315/251‑1 (MQ=255) acaacaGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGGGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGACGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGTGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTTGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCgg < 1:403859/251‑1 (MQ=255) cgtcgtTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAACAGTGGGCGTGGTCGGCATCGGCGGGC‑TGGGGAATATGGGGATTAAGCTGGCCCCCCCGGTGGGGGGACA‑TGTGGGGGCCTTTT‑CCCCTTCTT‑AGGCAAAACGCGCAGCGGCCAAA‑Gccc > 1:348482/1‑251 (MQ=255) gtTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTggg < 1:543538/251‑1 (MQ=255) gaTTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑TGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCAc < 1:412862/250‑1 (MQ=255) ttCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCATATGGGGATTTAGCTGGCCCCCGCGGTGGGGGCACC‑TGTGGGGGCATTTT‑CCCCTTCTT‑AGGCCAAACGCGAAACGGGAAAA‑GCCCTGGGGGCCGGT‑GGAGTTGTTTACTCACGc > 1:212808/1‑251 (MQ=255) gTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAAt < 1:529494/251‑1 (MQ=255) gTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGAAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGAATATGGGGGTTAAGATGGCCCACGCGGTGGGGGGCCC‑TGGGGGGGGCTTTT‑CCACTTCTT‑AGGCAAAACGCGAAGCGGGAAAA‑GACCCGGGGGGCGAT‑GAAGTTGTTAACTcccccca > 1:552550/1‑244 (MQ=255) gTCACCCGCAAGAGCAGCGGGCGGCGGTGGCCCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAAt < 2:515991/251‑1 (MQ=255) ccccGCAAGAGCAGCTGGCGGCGGTGGCTCCTTGGGTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GTAGGTGTTAACGCACGCAATGcc < 2:245736/250‑1 (MQ=255) cGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCCTATGGGGGTTAAGCTGGCCCACCCGGTGGGGGGCCACTG‑GGGGGCCTTTA‑CCCCATCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGGCGAT‑GAAGTTGTTTACTCACCCAATGCCGa > 1:510162/1‑250 (MQ=255) cGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCATATGGGGGTTAAGCTGGGCCACGCGGTGGGGGCCCA‑TGGGGTGGCCTTTT‑CCACTTCTG‑AGGCAAAACGCGGAGCGGCAAAA‑GCCCCGGGGGGCGGT‑GGAGTTCTTTACTCCCGCAATGCCgcg > 1:466125/1‑249 (MQ=255) gCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCCTATGGGGGTTTAGCTTGGCCACGCGAGGGGGGCACA‑TGTGGTGGCATTTT‑CCACTTTTT‑AGGGAAAAAGCGAAGAGGCAAAA‑ACCCTGGGGGGCGAT‑GAAGGTGTTTACTAACGccaaggcgatg > 1:139752/1‑241 (MQ=255) gggTGGCTCCTTTGTTGGGTGCAGGGATCCCCA‑GTGATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTGAACTCACGCAAGGCCGATGAGATGGCGGCTCATCTg < 2:312338/250‑1 (MQ=255) gTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGaa < 1:552674/251‑1 (MQ=255) ccTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCATATGGGGATTAAGCTGGCCCACGCGGTGGGGGCACA‑TGTGGGGGCATTTA‑CCACTTCTG‑AGGGAAAAAGCGAAGCGGCAAAA‑ACCCTGGGGGCCGGT‑GAAGTTGTTAACTCACGCAATGGCGCTGAGATGGCGGGTCATTTGAagaggtt > 1:351598/1‑248 (MQ=255) tgtgtgCAGGGAGCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGAGGGCGGCTCATCGGAAGAG‑GTTCGAttt < 2:348482/250‑1 (MQ=255) gtgtgCAGGGATCACAACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCa < 2:486758/251‑1 (MQ=255) gggtgCAGGGATCACCTCGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGTCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCGCGCAATGCCGATGAGATGGCGGCGGATCTGAAGAG‑TGTCGATTTc < 1:483226/248‑1 (MQ=255) gtgCCGGGATCGCCGCGT‑ATTCGCCGCTGCGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGAGTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATGTA‑CCACTGCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGATGGTAATTCACGCAATGCCGATGGGATGGCGTCTTGTCTGAAGAG‑TGTCGATTTCAtt < 2:78431/251‑1 (MQ=255) caccacGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGCGCAAAAACGTGGGCGTGGTCGGCATCGGCGGAC‑TGGGACACATGAGGAATAAACTGGCCCCCGCGGTGGGGGAACC‑CGTGGGGGCATTTA‑CCACTTCTGTGGGCAAAA‑GCGAAGCGGCCAAA‑GCCCTGGGGGCCGATAGAA‑TTGTTAACTCCCGCAATGCCGATGAGATGGCGGCTCATCTGAAAAG‑GTTTGATTTCATTTTTAATACa > 1:268438/1‑250 (MQ=255) accacGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCCTATGGGGGTTAAGCTGGGCCCCGCGATGGGGGCACA‑TGGGGTGGCATTTT‑CCACCTCTG‑AGGGGAAACGCGGAACGGCAAAA‑GCCCTTGGGGCCGAT‑GAAGTTGTTAACTCCCGCAATGCCCCTGGGATGGCGGCTCATCTGAAGAGGTTTGGTTTTC‑TTTTGAATTCAgg > 1:107489/1‑250 (MQ=255) cGT‑ATTCGCCGCTACGTCACTGGCAGGACGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGTGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCt < 1:54060/251‑1 (MQ=255) aTTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTgc < 1:123266/250‑1 (MQ=255) gccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCCTATGGGGGTTTAGCTGGCCCCCGCGGTGGGGGGAAA‑TGTGGGGGCATTTA‑CCACTTCTG‑AGGCAAAAAGCGAAGCGGGAAAA‑GCCCTGGGGGGCGAT‑GAAGTTGTTAACTCCCGCAACGCCGATGAGATGGCGGGTCATCTGAAGAG‑GTTTGGTTTTATTTTGAATACAGGAGCTGCGCcac > 1:191322/1‑251 (MQ=255) cGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAAtct < 2:519754/251‑1 (MQ=255) gTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGCC‑TGGGGCATATGGGGGTTAAGCTGGCCCCCGCGATGGGGGCACA‑TGTGGTGGCATTTAACCCCTT‑TG‑GGGCAAAACGCGAAGCGGCAAAAACCCCTGGGGGC‑GAT‑GTAGTTGTTAACTCCCGCAATCCCGCGGAGATGGCGGCTCCTCTTGAGAG‑TTTCGATTTTATTTTGAATACAGTAACTGCGCCACCTAAttcc > 1:296214/1‑248 (MQ=255) cAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGAttt < 1:470699/251‑1 (MQ=255) ggccgggccgGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTa < 1:223225/251‑1 (MQ=255) gccgcgccggGGAAAAAAGTGGGCGTGGTCGGCATCGGGGGTC‑TGGGACATATGGGGATTATGCGGGCGCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTTCGCCACATAATCTCGACGATTTTac < 2:244420/251‑1 (MQ=255) ccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGAGTTTACCACCtt < 1:489078/251‑1 (MQ=255) aaaaaaGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGa < 2:191322/250‑1 (MQ=255) aaaaaGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGGCATATGGGGATTAAGCTTGCCCACGCGATGGGGGCACA‑TGTGGGGGCATTTA‑CCACTTCTG‑AGGCAAAAAGCGAAGCGGCAAAA‑GCCCTGGGGGCCGCT‑GAAGTTGTTAACTCACGCAATGCCGGTGAGATGGCGGCTCCTCTGAAGAG‑t > 1:154443/1‑185 (MQ=255) aaGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGt < 1:448815/251‑1 (MQ=255) gggCGTGGGCGGCATCGGGGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAAGACAGTAGCTGCGCCACATAATCTCGACGAGTTTACCACCTTGCTGAAGCGTGATg < 2:300608/251‑1 (MQ=255) gCATCGGCGGTC‑TGGGGCATATGGGGGTTAAGCTGGCCCACGCGATGGGGGCCCA‑TGGGGTGGGATTTA‑ACACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGGTGTTAACTCACGCAATGCCGGTGAGATGGCGGCTCATCTGAAGAG‑TTTCGGTTTCATTTTGAATAAAGTAGCCTCGCCCCATAATATCGACGGTTTTTTCACCATGCTGAAGGGTGGTGGcccccttacg > 2:205521/1‑242 (MQ=255) cggTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCtggttg < 1:19208/251‑1 (MQ=255) gtttggcaCATAGGGGGATTAAGCGGGCCCCCGCGAGGGGGGCACA‑TGTGGTTGCATTTA‑CCACTTCTG‑TGGCAAAACGCGAAGCGGCAAGA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACGCACGCAATGCCGATGAGATGGCGGCTCAACTGAAGAG‑TGTCGATTGCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGGTTTTGCATCCTAGCTGAAGCGGGATGGCACCAGGACGCtggttg < 2:59902/242‑1 (MQ=255) gACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCt > 1:267710/1‑251 (MQ=255) gACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCt < 1:335228/251‑1 (MQ=255) | ACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGT‑ATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTC‑TGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACA‑TGTGGTGGCATTTA‑CCACTTCTG‑AGGCAAAACGCGAAGCGGCAAAA‑GCCCTGGGGGCCGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAG‑TTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCT > NC_000913/343200‑343693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |