| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,196,426 | Δ46,519 bp | yehF–[yeiB] | 37 genes yehF, yehI, yehK, yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA, mglC, mglA, mglB, galS, [yeiB] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2196426 | 2242944 | 46519 | 36 [0] | [1] 37 | yehF–[yeiB] | yehF,yehI,yehK,yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA,mglC,mglA,mglB,galS,[yeiB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2196425 | 0 (0.000) | 36 (0.540) | 33/484 | 0.6 | 100% | intergenic (+92/‑49) | metG/yehF | methionine‑‑tRNA ligase/PF05406 family protein YehF |
| ? | NC_000913 | 2242945 = | 0 (0.000) | coding (23/1158 nt) | yeiB | DUF418 domain‑containing protein YeiB | |||||
GCTTCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAG > NC_000913/2196227‑2196671 | gcTTCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGTTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGGTTTCTTGCAATGGTGTCTCTCTCTAGCCCGCATAAtcgagcgttacgttgcgctccattgttcctgccttttaatcagttgtgatga < 1:380999‑M1/251‑53 (MQ=255) ctGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcg < 2:527800‑M1/248‑62 (MQ=255) ccTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgac < 1:27488‑M1/250‑90 (MQ=255) ccTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgac < 2:333252‑M1/250‑90 (MQ=255) cGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgccgcacagcgcgcagaaactcgtggcgcgtattctgactggatt > 1:341215‑M1/1‑156 (MQ=255) gggAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggattt > 1:306049‑M1/1‑155 (MQ=255) gATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgt > 1:323773‑M1/1‑128 (MQ=255) cTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactg > 1:317552‑M1/1‑118 (MQ=255) tAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTACTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactgg > 1:76316‑M1/1‑117 (MQ=255) aaaCCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCTTCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggt > 1:378390‑M1/1‑116 (MQ=255) atcaGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcgg < 2:310444‑M1/251‑146 (MQ=255) aGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggc < 1:248101‑M1/180‑78 (MQ=255) aGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggc > 2:248101‑M1/1‑103 (MQ=255) gAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgcca < 2:154554‑M1/250‑152 (MQ=255) cccccTTCAAGGCGCTGCATCGACAGCGCCTTTTCTATATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttc < 2:197283‑M1/251‑161 (MQ=255) cATCGACATCTCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgccccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtgtcgcgtattctgactggttttgaactatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgcgttcacgcagtaatgcaccgc < 1:410151‑M1/251‑178 (MQ=255) cATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCGCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttgtaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgagcaatccaccaagagaggtcgttgtcgtggcactggtggcatcgcggatgccacgcgccttcacgcagtaatgcaccgc < 1:271032‑M1/251‑178 (MQ=255) aCAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcg > 1:576189‑M1/1‑69 (MQ=255) gcCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcg > 1:444480‑M1/1‑64 (MQ=255) ccTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcg > 1:531637‑M1/1‑63 (MQ=255) cTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatcaaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagac > 1:530261‑M1/1‑62 (MQ=255) ttttCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAAACCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcccagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagac > 1:571663‑M1/1‑61 (MQ=255) ttATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagcca < 1:288669‑M1/249‑195 (MQ=255) aaaTTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttat < 2:227267‑M1/251‑201 (MQ=255) cTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggggc > 2:473691‑M1/1‑45 (MQ=255) gttTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagc < 1:554343‑M1/251‑215 (MQ=255) ttCTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgt < 2:323773‑M1/250‑217 (MQ=255) cTTGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttg > 1:389060‑M1/1‑32 (MQ=255) ttGCGATTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttgt > 1:419980‑M1/1‑31 (MQ=255) aTTTTGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgctgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagaaagccacgttattggtgcccagcagcgtttgtagcgc > 2:561002‑M1/1‑26 (MQ=255) ttGTCTCTCTCTAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttgtagcgcaat > 1:289171‑M1/1‑23 (MQ=255) ctctctctAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcccgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttgtagcgacata > 2:540015‑M1/1‑19 (MQ=255) ctAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcggcgatcgagacagacacgttattggtgcccagcagcgtttgtagcgcaataagaatt < 1:336884‑M1/248‑236 (MQ=255) tAACCCGCATAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttgtagcgcaataagaatttgct > 1:140531‑M1/1‑12 (MQ=255) aTAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgccgcacagcgcgcagaaactcgtggcgcgtattctgactggctttgaacaatccaccaagcgaggtcgttgtcgtggccctggttgcatcgcggattccacgcgccttcacgcagtaatgcaccgcgtcgatcgagaccgccacgttattggtgcccaccagcgtttgtagcgccctacgaatttgctgtgtccg > 2:303‑M1/1‑4 (MQ=255) aTAAtcgagcgtgacgttgcgctccattgttcctgccttttaatcagttgtgatgacgcacagcgcgcagaaactcgtggcgcgtattctgactggatttgaacaatccaccaagagaggtcgttgtcgtggcactggttgcatcgcggatgccacgcgccttcacgcagtaatgcaccgcgtcgatcgagacagccacgttattggtgcccagcagcgtttgtagcgcactaagaatttgctgtgtc > 2:400567‑M1/1‑4 (MQ=255) | GCTTCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAG > NC_000913/2196227‑2196671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |