| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,123,930 | A→T | V176E (GTA→GAA) | cytR ← | DNA‑binding transcriptional repressor CytR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,123,930 | 0 | A | T | 98.7% | 266.0 / ‑4.7 | 75 | coding (527/1026 nt) | cytR | DNA‑binding transcriptional repressor CytR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (26/48); minor base . (1/0); total (27/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTGA > NC_000913/4123683‑4124172 | gAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGCAGGTGAAGTCGCCACGGGCGATGCATTGCGGATCACCCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCCTCTCTTCGGGGCCGGCTATACCGCCAATCCGTTTTTGCCCTTTCTCATATA‑AATAATTTTCTg > 1:540239/1‑251 (MQ=255) cgcCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCAGCGCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCAt < 1:504085/251‑1 (MQ=255) cacaTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGGGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCAGCAAATg < 2:453640/251‑1 (MQ=255) acaTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATgc < 1:237680/251‑1 (MQ=255) acaTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATgc < 2:318007/251‑1 (MQ=255) caTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATgcg < 1:85028/251‑1 (MQ=255) aTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAACGGCCTCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATgcgg > 1:94461/1‑251 (MQ=255) tCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATAAAGCCAATCCGTTTTTGCCCTTGCTCCTATA‑AATAATTTTCTTCATCAAATtcggc > 1:474071/1‑251 (MQ=255) cGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGACCAAGCAGCTGCGGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCGTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATgcggc < 2:249644/250‑1 (MQ=255) gCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGCCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGcggcgg < 2:364867/251‑1 (MQ=255) aTGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCGTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCATCCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTGTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGt < 2:515516/249‑1 (MQ=255) cAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGact > 1:493571/1‑249 (MQ=255) cAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCGTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGAtt < 1:523074/251‑1 (MQ=255) cAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCGTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCAGAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCGCTTCGTGACCGGCTAGACAGCCAATCCGGGTATGCCCTTGCGCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGAtt < 2:522665/251‑1 (MQ=255) cAGAAGACAGCAGTAGGCGGTTGTGGAAGAGCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGAtt < 2:130670/251‑1 (MQ=255) agacaggcgTAGGCAGGTGTGGAAGATCAGGCCGCTGCTGGCTCGCTTTGCTTCCGGCTGCGAAGGTGAAGTGGCCACGGGCGACGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCCGTATTGACCCAGCGGAATCTCTTCCGGACCGACGATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATTATTTTCTACATCAAATGCGGCGGGCAGATTGTCg < 2:521908/243‑1 (MQ=255) aCAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCCTTGCTTCCCGCTTCGAAGGCGAAGTCGCCACGGGCGATGTATTGCGGATAAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGGGACACAGCGGCATCTCTTCGGGACCGGCTATACAACCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGcggcgggccgaatgttga > 1:258417/1‑238 (MQ=255) caggtgTAGGCGGTGGGGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTCCCGGCTGCGAAGGGGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGTCTTGCAGGCGGTATTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATAGA‑AATAATTTTCTGCATCAAATGCGGCTTTCATATCGTCGat‑a < 2:381858/246‑1 (MQ=255) agcagTAGGCAGTTGAGGAAGATCAAGCAACTGCTGCCTCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCAAAGGGCGCTGTATTGCGGATCAACCATAATGCCGCAGCGCCGAAGCGGCTGAACATAGCCTCGCAGGCGGTTGTGTTACAGCTGCATTTCTTAGGGATCGGCTCTACAGCCAATCCCCTTATGACCTTGCCCATAAACAAAAATTT‑CTGCATCACATGcggcgggccgatttttggta > 2:240368/1‑236 (MQ=255) aGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGGTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGGCAGGATGTCGGT‑ATggaatg > 1:231740/1‑246 (MQ=255) gTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGc < 1:351176/251‑1 (MQ=255) gTTGTGGAAGAGCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCTATGGATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑AATAACTGTAGGc < 2:368263/251‑1 (MQ=255) gAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGcagctcc > 1:122090/1‑251 (MQ=255) cagcTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACCCAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCCTCaa > 2:426328/1‑200 (MQ=255) cagcTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCaa < 1:426328/200‑1 (MQ=255) cGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCATCTCCAGCTCCGGTGCAAAttcgttcg < 1:445907/251‑1 (MQ=255) gCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGGATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATcgg < 1:124879/251‑1 (MQ=255) ttCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATCATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCCTCTCTTCGGGACCGGCTATACCGCCAATCCGTTTATGACCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGGTTTTTGAT‑ATGAACTGTAAGGAGCTCCCGCTCCGGGGCGAATTCGGTCGCCATCAACATcgggg > 1:226432/1‑249 (MQ=255) tCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATcggc < 2:493571/249‑1 (MQ=255) tCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATcggc < 1:122846/249‑1 (MQ=255) gAAGGTGAAGACGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCCGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGAAAAAGCGGCATCTCATCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGGCAGATTGTTGATTAT‑AACAGTAGGCAGCTCCAGCCCCGGTGCAAAtttgttttcccacaccctccgtgggg > 2:519020/1‑231 (MQ=255) aaGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAg < 1:19080/251‑1 (MQ=255) ggTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGAt < 1:337284/251‑1 (MQ=255) gAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCGGAACATAGCCTTGCAGGCGGTAGGGACACAGCGGCATCTCTGCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCAGCAAATGCGGCGGTCAGATTGGCGAT‑ATGAACTGGAGGCAGCGCCTGCTCCGGTGCAAATTCGTTCGCCAGCTCCATCGGCGGCAGATTAc < 2:542235/251‑1 (MQ=255) gTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACCGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCCAATGCGGCGGTCAGATTGTTGAT‑ATGAACTGTAGGCCGCTCCCGGTCCGGGGCAAATTTGTTCGCCATCACCATCGGCGGCAGAATACGcc > 1:296843/1‑250 (MQ=255) gCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAAt < 2:231740/251‑1 (MQ=255) aTGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTCGTGACACAGCGGCCTCTCTTCGGGACCGGCCATACCGCCAATCCGTTTATGCCCTTGCTCCTATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGGT‑ATTAAATGTAGGCTGCTCCCGCCCCCGGGCGAATTTGTTCGCCCTCACCATccgcgggcggattccgtgttcccgaactgg > 2:74237/1‑227 (MQ=255) aTGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTcc < 1:74237/243‑1 (MQ=255) tGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGGGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGAATGGCGAT‑ATTAACTGTAGGCAGCTCCAGGTCCGGGGCAAATTTGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTTCTCAATgacg > 1:118677/1‑248 (MQ=255) gCGGATCAACCATAATGCCGCAGCGACGCCGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCCAATGCGGCGGTTAAATTGTCGAT‑ATGAAATGTAGGCCGCTCCAGCTCCGGTGCCAATTCCTTCGCCCTCACCCTCGGCGGCCGATTTCCCTGTTTCTCCATGCTGGcctcc > 1:163670/1‑247 (MQ=255) cGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCaa < 2:122090/251‑1 (MQ=255) cGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCaa < 2:18246/251‑1 (MQ=255) cAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGc < 2:163670/251‑1 (MQ=255) ccATAATGCCGCTGCGACGCGGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGc < 2:491957/251‑1 (MQ=255) cATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTGCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGcc < 2:189959/251‑1 (MQ=255) aTAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCt < 1:273922/220‑1 (MQ=255) aaTGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCGCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCtt < 1:341002/250‑1 (MQ=255) gcgcCTGAACATAGCCTTGCAGGCGGTAGAGACACCGCGGCATCTTTTCGAGACCGGCTATACAGCCAATCCGTTTATGCCCCTGCTCCTATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGGTTGTCGAT‑TTGAAATCTGGGCCGCTCCAGCTCCGGTGCCAATTCGGTCGCCCTCACCAACCGCAGCACATTCCGCCGTTCCTCAAAGCAGGCCTCAACAGGCAGCCCTGAACCCCGACACAACATg > 1:531481/1‑251 (MQ=255) cgcCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCAGCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCTTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGc < 2:540239/251‑1 (MQ=255) gcCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGcc < 2:127759/251‑1 (MQ=255) gcCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATATCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGGCCGAATTTAGAT‑ATGAACTGTTAGCAGCTCCAACCCCGGGGGAAAATCGTTCGCCATCACCAACGGCGGCAGATTTAGCTGTTTCTCAATGCCGGCCTTAAAAGGCCGACCTGAAACCAGCAacaacaatcc > 1:98694/1‑247 (MQ=255) ccTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAAttc < 1:138706/166‑1 (MQ=255) gAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCa < 1:240773/251‑1 (MQ=255) gAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCAGCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCGCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCGCAAGGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCa < 1:100041/251‑1 (MQ=255) gCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGt < 1:197613/250‑1 (MQ=255) ggCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCACTCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCGAATGCGGCGGTCAGATTGTTCAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGACTTGCACCCAGCAACAAAATGCCATCAATTTGCTTGGtgttg > 1:243095/1‑248 (MQ=255) aGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCaa < 1:551738/250‑1 (MQ=255) cacaGCGGCATCTCCTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGAt < 2:327057/251‑1 (MQ=255) gCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAg < 2:94461/251‑1 (MQ=255) ctTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGtttttt < 2:441203/249‑1 (MQ=255) gggACCGGCTATACAGCCAATCCGTTTATTCCCTTGCTCAAATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAG‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCctgct < 2:448252/251‑1 (MQ=255) gtaCCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCctgctg < 2:118677/249‑1 (MQ=255) aCCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCCGCCTTGAACCCAGCAACAAAATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGAt > 2:23307/1‑251 (MQ=255) gCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑CATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAAATGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGCCAGACTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGGTTTTTCCTGCTGAttttt > 1:390265/1‑250 (MQ=255) attcAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCGGTTCCGCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGAt < 2:437867/247‑1 (MQ=255) aGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATgcgc > 1:322824/1‑250 (MQ=255) gTTTATGCCCTTGCTCATATA‑AATAATTTTCTGCATCAACTGCGGCGCTCAAATTGTCGAT‑ATGACCTGTTGGCAGCTCCAGCTCCGGTGAAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCCTCAATTTGCTTGGAGATGATCAAATCGATAAAGGTTTTTTCCTGCTGGTTTTGATGCGCACAGTCGcc > 1:500366/1‑250 (MQ=255) tGCCCTTGCTCATATA‑ACTAATTTTCTGCATCAAATGAGGCGGTCAGACTTTCGAT‑ATGAACTGTAGGCAGCTCCACCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCCGATTAACCTGTTCCTCCATGCTGGCATCAAACGGCAGCCTTGAAACCAGCCACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGGTTTTTTCTGCTGCTTTTTATTCGCCCCGTTGCCAATccg > 2:542073/1‑249 (MQ=255) ccTTGCTCATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACCACCTGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCAc > 1:10985/1‑251 (MQ=255) tGCTCATATA‑AATAATTTTCTGCATCAAAGGCGGCGGTCAGATTGTCGAT‑ATGAACCGTAGGCAGCTCCAGCTCCGGTGCAAATGCGTTCGCCATCACCATCGGCGGCGGATTACGCGGTTCCTCAATGCTGGCATCAAACGTCTGCCTTGAACCCAGCAACAACATGCCATGAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTGTGCGTGCTGATGTTGATGCTGACAGTCCCCAATCAGCACCa < 2:41801/250‑1 (MQ=255) cATATA‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGatat < 1:68738/251‑1 (MQ=255) tata‑AATAATTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATccgaacccgctatcc > 1:322770/1‑237 (MQ=255) a‑aataaTTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTTCAGCTCCGGTGCAAATTAGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATTAAACGGCAACCTTGAACCCAGAAAAAACATGCCCTCAATTTGCTTGGTGATGATCAAATCGTAAAAGGTTTTTTCCTGCTGATTTTTATGCGCACAGTCGCCAATCAGCACCATATATCCGTg > 1:322576/1‑251 (MQ=255) a‑aataaTTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCCCCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCCACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGGTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTg > 1:507986/1‑251 (MQ=255) aataatTTTCTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGGTTTTTCCTGCTGATTTTGATGTTCACAGTCGCCAATCAGCACCAGATATCCGTGa < 2:560504/251‑1 (MQ=255) | GAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATA‑AATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGAT‑ATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTGA > NC_000913/4123683‑4124172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |