| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,505,088 | 0 | C | T | 23.2% | 122.4 / 14.4 | 69 | S311S (TCG→TCA) | yhfS | putative aminotransferase YhfS |
| Reads supporting (aligned to +/- strand): ref base C (13/40); new base T (16/0); total (29/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGCC > NC_000913/3504838‑3505336 | aTTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTc < 1:269971/251‑1 (MQ=255)aTTTTACACCCCGTACGTTCCCCTCCCCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATTCTCTCCCGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTc < 2:464486/251‑1 (MQ=255) cTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTTCTATTTCTActcttcaaccccccggga > 2:116152/1‑235 (MQ=255) cccTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTCATATTTTGACTCTGC‑A‑CCCACC‑GGGGaaggca > 1:4201/1‑250 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATTCTGGCAATACTCTCACTCAAATTCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTaaggcaagg < 1:25307/249‑1 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTCATATTTTGACTCTTC‑A‑CCCCCC‑GGGGaaggg > 1:135307/1‑244 (MQ=255) aaCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTaaggc < 2:135307/245‑1 (MQ=255) aCCCTCTCCCCAAAGGGGCGCGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑C‑TTTTATTTTTTGACTCTGC‑A‑CCCACC‑CGGTAAGGTAAAGCAc > 1:217018/1‑251 (MQ=255) aaaGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTgc < 1:169646/251‑1 (MQ=255) aaGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTTGACTCTTC‑A‑CCCACC‑GGGGAAGGAAAGGCAC‑CGCGCtttttcg > 1:361790/1‑248 (MQ=255) aaGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTgcg < 1:490757/251‑1 (MQ=255) ggggACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑ATTCCTATTTTGACCCTGC‑A‑CCCACC‑GGGGAAGGGACGGCAC‑CGCGCTTTTGCGCC‑TC‑TTccc > 1:80385/1‑250 (MQ=255) gggACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑GTTCATATTGCGACTCTGC‑A‑CCCACC‑TGGTAAGTCAAGGCAC‑CGCTCTTTTGCGCC‑TC‑TTCCAg < 2:503937/251‑1 (MQ=255) ggACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTCGACTCTGC‑A‑CCCACC‑gg > 1:120583/1‑214 (MQ=255) ggACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑gg < 2:120583/214‑1 (MQ=255) gACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTTGACTCTGC‑A‑CCCACC‑CGGGAAGGGAAGGCAC‑CCCGCTTTTGCGCC‑CC‑TTCCAGc > 1:212093/1‑250 (MQ=255) gACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGACTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTTATTTTTTGGCTCCGC‑A‑CCCACC‑GGGGGAGGCGAGGGAC‑CGCGCTTTTGCGCCCTC‑TTccggc > 1:358271/1‑248 (MQ=255) cGTTCAGTGCGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTCGACTCTGT‑C‑CCCACC‑CCGTAAAGGAAGGCAC‑CCCGCtctttcgcaccttcccgcaccc > 2:16069/1‑230 (MQ=255) gTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCActct < 1:116152/251‑1 (MQ=255) ttCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTCATATTTTGACTCTTC‑A‑CCCACC‑GGGGAAGGCAAGGGAC‑CGCGCCTTTTCGCC‑TC‑TTCCCCCActctt > 2:65525/1‑250 (MQ=255) aGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TGTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAATGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTggcg < 1:268979/251‑1 (MQ=255) gTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAACTACTGGACATACTCACACGCAAAATCCGCAGCACCGTCTCTTAAACACAGCGATTCGGGCTAATGCGAATCGCACAATGTTCTGATTGAGGCTTCGCCTGGCGCAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCCTATTTCCACTCTCC‑AACCCCCG‑GGGCAAGG‑AAGACAC‑CCCGCTTTTGCGCC‑AC‑TTCCAGccgcctggcgg > 1:255453/1‑241 (MQ=255) gTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCCAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGGGT‑TTTCATTTTTCTATTCT‑C‑A‑CCCACCCGGCTAAGCCAGGGC‑C‑CGCGCCTTTGCGCC‑CC‑TTcccgacccgctgccg > 2:83112/1‑238 (MQ=255) tGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAATGCAC‑CGCGCTTGTGCGCC‑TC‑TTCCAGCACTCGGGCGGCAAT‑CGGCtgatga < 2:80385/250‑1 (MQ=255) tGCTATCCAGCATTACATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑GTTCATATTTTTGCTCTCC‑C‑CCCCCC‑CGGGAAGGCAAGGCAA‑CGCGCTTTTTCGCC‑TC‑TTTCAGCCCCCTTGCGGGACT‑CGGCtggggaacgactc > 2:33916/1‑240 (MQ=255) aaaTACGGGCAATACGCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTGAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTc < 2:354860/251‑1 (MQ=255) aTACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTCGACTCTGC‑A‑CCCACC‑GGGGAAGGGAAGGCAC‑CGCGCTTTTTCGCC‑TC‑TTCCCGCAATCTGGCGGCAAT‑CGGCTGGTGAAACTCGACAATCAACAc‑cctcc > 1:467469/1‑246 (MQ=255) aCTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAG‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGAc < 2:212093/250‑1 (MQ=255) aaTACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCAt < 1:148563/251‑1 (MQ=255) aCTCTCCCGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTTTACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGGAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTCGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTgcgcctt > 1:158274/1‑246 (MQ=255) cACGCAAAATCCTCCGCACCGTATCTTGACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAGTGTGTATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGTCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCGGGCGGCAAT‑CGGCTGAAGAAACTCGACAATCAACCC‑CTTCGACTGCTCATTAGCaa < 2:310293/249‑1 (MQ=255) gCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTTGACTCTGC‑A‑CCCCCC‑CGGGCAGGCAAGG‑ACACGCGCTTTTTCCCC‑TC‑TTCCACCACTCTGGCGGCCAT‑CGGCCGGTGAAACTCGCAAATCACCAC‑CCTCgtcttcgccattgcactcacc > 1:137251/1‑231 (MQ=255) cAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTCATATTTCGACTCTTC‑A‑CCCAAC‑GGGGAAGGCAAAGCAC‑CGCGCTTTTTCGCC‑TC‑TTCCACCACTCTGGCGGCAAT‑CGGCTGATTAAACTCGACAAACAACAC‑ATTCGACTGCGCGTTCGCAaccaccc > 1:350588/1‑250 (MQ=255) aaaaGCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACcgc < 2:98693/251‑1 (MQ=255) ccGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTTGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTAGCGGCAAT‑CGGCTGAGGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCttt < 1:356357/251‑1 (MQ=255) ccGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCTACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCttt < 1:65525/251‑1 (MQ=255) cGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCtttt < 2:145011/251‑1 (MQ=255) cGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCtttt < 1:561216/251‑1 (MQ=255) gcagcaCCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTc < 1:130727/251‑1 (MQ=255) ccgactctTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCCCTCTGGCGGCAAT‑CGGCTGATGAAACTCTACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTcc < 2:358271/247‑1 (MQ=255) ggtgactTCACCGCTGCGATTCGGGTTAAAGCTAAGCGCACAATGTTCGGATTGTGGATTCGCCTGGCGAAACGTGCCGGAAAGGCGATAAAAGAGCGGCGTG‑A‑TGTCAGATTTCTACGCTGC‑A‑CCCGCC‑GGGTAAGGCGAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACGCTGGCGGCAAT‑CGGCTGATGAAACTCTACAATCAACAC‑ATTCGTCGGCACATTAGCAATCACCGCGCTGGTCACTTCCg < 2:36197/246‑1 (MQ=255) gTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTGTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACCC‑CTTCGACTGCGCATTAGCa < 1:214189/228‑1 (MQ=255) ctctTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATATTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑AATTTC‑TCTTTCGCCCCCGCCA‑CCC‑CC‑GGGGGAGGCAAGGCAC‑CGCGCTTTTTTCCC‑TC‑TTCCAGCACCCACGCGGCAAA‑CGGCTGATTAAACTAGAACATCACCAC‑CCTCGAACGCGCGTTAGCCATCACCGCGCTTTTCTCTTCCgggc > 1:511685/1‑249 (MQ=255) tCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTTATATTTTCACTCTGC‑C‑CCCACC‑GGGGAAGGCAAAGCAC‑CGCGCTTTTTCGAC‑CC‑TTCCAGCACTCTAGCGGCAATACGCCTG‑TGAAACCCGACAAAAAACAC‑CTTCGCATCACCATTAGCAATCACCGCGCCTTTTACTTCCGgcacccc > 1:572324/1‑249 (MQ=255) cACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGgcaccgc < 1:406850/250‑1 (MQ=255) gCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGTGATAAAAGAGCGGCGGG‑G‑CTTTAAATTTTGCCTCTGC‑A‑CCCCAC‑GGGTAAGGCACGGCAC‑CGCGCCTTTTCGCC‑TC‑TTCCAACACTCTGGCGGCAAT‑CGGCTGATGCAACTCCACAATCAAAAC‑CTTCGACTGCGCCTTTGCAATCAACGCCGTTTTCACTTCCgg > 1:518320/1‑237 (MQ=255) gCGATTCGGGGTAATGCTAAGCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCTGG‑A‑TTTCATATTTCGACGCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑GC‑TTCCAGCACTCGGGCGGCAAG‑CATCTGATGAAACGCGACAGTCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTGTGCACTTCCgg < 2:518320/237‑1 (MQ=255) ggTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACGCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACGTCCGGCGCCGCACCACCGTTAAGCaaa < 1:482934/251‑1 (MQ=255) gCGAATCGCGCAATGTTCTGATTGTGGATTCGCCTGTCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑C‑CCCTCC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCTACTGCGCATTAGGAATCACGGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCa < 1:88859/251‑1 (MQ=255) gCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGc < 1:210441/250‑1 (MQ=255) cGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑TTTCATATTTCTACTCTGC‑A‑CCCACC‑GGGGAAGGCAAAGCAC‑CCCCCTTTTTCGCC‑TC‑TTCCAGCACTCTTGCGGCAAT‑CCGCTGATGAAAATCGACAATCAACCC‑CTTCGACTGCGCATTAGCAAACACCGCGCTTTTTACTTCCCGCCCCCCACCCCCGTTAAGCAAAACCacac > 1:260216/1‑247 (MQ=255) gAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑G‑GTTCATATTTTGAATCTGA‑A‑CCCACC‑GGGGAAGGGAAGGGAC‑CGCGCTTTTTTGGC‑TC‑TTCCAGAAACCTGGGGGCAAT‑TGGCTGATGAAAATCGACAATCAACAC‑CTTTGACTGCGTCTTAGTAAACACCCCGCGTTTCACTTTCGGCAACCCCCCACCGGTAAGAAAAACCCGCaa > 1:224807/1‑250 (MQ=255) aTGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGGAAAGCAAAGAAC‑CGCGCTTTTGCCGC‑TC‑TTTCAGCACTCTTGCGGCAAA‑AGGCTGATGAAAATCGACAATCAA‑ACACTTCGAATGCGCCTTAAAAATCACCGCGCTTTTCACTTCCCGCACCGCCCCACCCGTAAACAAAGACAGCAACCGCTCAGAt > 1:497211/1‑250 (MQ=255) aTGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCCACCCTTC‑A‑CCCAAC‑GGGGAAGGCAAGGCAC‑CGCGCTTTTTTGCC‑TC‑TTCCCGCACCCTGGCGGCAAT‑CGGCTGATGAAACTCGAAAAACAACAC‑CCTCGCCCGCGCCTTAGCAATCACCGCGCTTTTTACTTCCGGCACCGCACCCACGTTTAGCaaaaacaacaaccggttagat > 1:515418/1‑232 (MQ=255) gTTCTGAGTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTGCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATAc < 2:482530/250‑1 (MQ=255) gatggtgGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGTCAC‑CGCGCTTTGTCTCC‑TC‑TTCCAGCACTCTGGCGTCAAT‑CGGCTGATTAAACTCGCCAATCAACAC‑CTTCGACTGCGCACTAGCAATCACCGCGCGTTTCACTCCCGGCACCGGACCCCCGTGAAGCAAAGCCAGCAATCGTTCAGATAcccc < 2:498093/244‑1 (MQ=255) aTTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCcctgcc < 1:559683/251‑1 (MQ=255) gggCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCGCCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCAt < 2:109645/250‑1 (MQ=255) gAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTTGACCCTTC‑A‑CCCACC‑GGGGAAAGCAAGGCAC‑CCCGCTTTTGCGCC‑CC‑TTCCCGCACTCTTGCGGCAAT‑CCGCCGATGAAACTCCACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCCACACCGTTAAGCAAAGCCAGCAACCTCTCAGAAACCCCATCCCGCCCCCCGTGCATCACt > 1:386379/1‑251 (MQ=255) gAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTACCCTTTTTACTCTGC‑A‑CCCCCC‑GGGAAAGGCAACGCAC‑CGCCGTTTCGCCCC‑TCATCCCACCAC‑CTGGCGGCAAT‑CGGCTGATGAAAATCAACAATCAAAAC‑ACTCGACTTCGCCTTTGCAAACACCACGCTTTTCAATTCCGCCCCCGCACCCACGTTTAGCAAAACCAGCAACCCATCAGGAACCCCTGCCTACCCCGCGTGCATccat > 1:242751/1‑248 (MQ=255) cGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGGCTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCAGCGCGTGCATCACTGGCGCAAac < 1:414324/251‑1 (MQ=255) aaGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCTACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCTCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCTCCGTTAAGCAAAGCCAGCAACCGTTCAGATACCcctg < 1:108538/218‑1 (MQ=255) ggCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCTCTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTCCGACGGCGCATTATCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGATCAGATACCCCTGCCTGCACCGCGTGCAGCACTGCCGCAAACACCAGa < 2:563894/251‑1 (MQ=255) atagagatgcggcgcgtcaa‑TTTCATATTTCGACTCGGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TGCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCGCTGCCTGCACCGCGTGCAGCACGGGCGCAAACACCAGAc < 1:219554/232‑1 (MQ=255) gagCGGCTGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGGAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACCC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCCCCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATa < 2:361790/251‑1 (MQ=255) gcggG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACTC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTcc < 1:14816/251‑1 (MQ=255) gg‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCCCCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAgc < 1:195311/251‑1 (MQ=255) g‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAgcg < 2:487242/251‑1 (MQ=255) a‑TTTCATATTTCGACCCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGTCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCGTGTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCATATGCCCCGGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCATTACTTCCAgcgc < 2:262185/251‑1 (MQ=255) tCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCCC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTCGCCATCACCGCGCTTTTCACTTCCGGCACCGCACCCCCGTTCAGCAAAGCCAGCAACAGTCCAGTTTCCCCTACCTGCACCGCGTGCATCAGTGGCGCAAACACCAGACCACGCAAGACTTCCAgccgctg > 2:384072/1‑246 (MQ=255) ttCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTCGAGCC‑TC‑TTCCAGCACTCTGGCCGCAAT‑CGGCTGATGAACCTAGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGcc > 1:264478/1‑251 (MQ=255) | ATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTGGATTCGCCTGGCGAAACGTTCCGGAAAGGCGATAAAAGAGCGGCGGG‑A‑TTTCATATTTCGACTCTGC‑A‑CCCACC‑GGGTAAGGCAAGGCAC‑CGCGCTTTTGCGCC‑TC‑TTCCAGCACTCTGGCGGCAAT‑CGGCTGATGAAACTCGACAATCAACAC‑CTTCGACTGCGCATTAGCAATCACCGCGCTTTTCACTTCCGGCACCGCACCACCGTTAAGCAAAGCCAGCAACCGTTCAGATACCCCTGCCTGCACCGCGTGCATCACTGGCGCAAACACCAGACCACGCAATACTTCCAGCGCCTGTGCGCC > NC_000913/3504838‑3505336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |