Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,797,853	0	T	C	30.0%	87.6 / 10.7	51	E31G (GAA→GGA)	pheT	phenylalanine‑‑tRNA ligase subunit beta
Reads supporting (aligned to +/- strand):  ref base T (26/9);  new base C (0/15);  total (26/25)
Fisher's exact test for biased strand distribution p-value = 5.81e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAAC  >  NC_000913/1797605‑1798096                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                    gTTCGCCACGCAGTTTCTCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑GGGTCGCTACCGCGACACGCAGGCCCTGACGGCATTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTGTTGTCACACGCAGTTTGTCAGCGTGCGGATGCTGCTCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTcc                                                                                                                                                                                                                                                   <  2:296914/251‑1 (MQ=255) gTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTcc                                                                                                                                                                                                                                                   >  2:73407/1‑251 (MQ=255) gTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGACGGCAACCGGTTTGACACCGT‑CAACTTcc                                                                                                                                                                                                                                                   >  2:306882/1‑251 (MQ=255)     gCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGC‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGCCGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGc                                                                                                                                                                                                                                               >  2:15156/1‑251 (MQ=255)        ccGCAGTTTCGCCGCTTTAATTTTGAAAACCCCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCGCCGCAGA‑CG‑A‑GGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACCCTC‑AACCGCGTCACCAACGTCC‑ACGCCGTGGAAGCGGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCg                                                                                                                                                                                                                                            <  2:183884/250‑1 (MQ=255)                tCGCCGCTTTAATTTTCAAATCACCCGGCAGAACAGCATCCA‑TGCTCGCTAACGCTCCACGCAGGCCCTGACGGCGGTTTGGCGAACCGCAGA‑CG‑T‑TGCCCAGCAGGCGATCGCAGCCGACATTCACTTTTGTCACACGCAGATTGTCAGCGTTCGGATGCTGCGCCCACTC‑AACCACTTCACCAACGACA‑CCGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGC‑CCTCTTCCAGGCCCGCCATAGtg                                                                                                                                                                                                                                    >  2:359518/1‑251 (MQ=255)                               ggaaaccccccGGAAGACCAGCACAAA‑GGGCCGCTCCCGCTACCCGCAGGCCCTGACGGCAGTTGGGCGCCCCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACCCGCAGTTGGTCAGCGTTCGGATGCTGCGCACACCC‑AACCACTTCACCAACGCCC‑CCGCCGTGGAAGCTGCCGGCAACCGGTTCTACCCCGT‑CAACTCCCAGGCCCGCCATAGTGATTGGATTTGCCAgc                                                                                                                                                                                                                     <  1:472498/243‑1 (MQ=255)                                    tCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATc                                                                                                                                                                                                                >  1:146334/1‑251 (MQ=255)                                      aCCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGc                                                                                                                                                                                                              >  1:204291/1‑251 (MQ=255)                                       ccgggCAGACCAGCCCCAA‑TGGTCCCTACCGATACACGCAGGCCCGGACGGAAGTTGGGCGCCCCGCAGA‑CG‑A‑TGTCCAGCAGGCGACCGCCCCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGAGGCGGCGCACCCTC‑ACCCTCTTCACCAACGACC‑ACGCGGTGGAAGCGGCCGGCAACCGTTTCTACACCGT‑CACCGCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCt                                                                                                                                                                                                             <  1:91020/248‑1 (MQ=255)                                       cccGGCAAAACAGC‑CCAAGTGGCCGCTCCCGCTACCCGCAGCCCTTGACGGCAGTTGGGCGCCCCG‑AGAACG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCCCTTTTGTCACACGCAGTTTGTCAGCGTGCGGATGCTGCGCACACCC‑ACCCTCTTCCCCACCGCCC‑CCGCCGTGGAAGCTGCCGGCAACGGGTTCTACACCGT‑CAACTTCCAGCCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCt                                                                                                                                                                                                             <  1:178788/251‑1 (MQ=255)                                                  aGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCg                                                                                                                                                                                                  >  2:132567/1‑251 (MQ=255)                                                             gTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCACCGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCAccc                                                                                                                                                                                         >  2:404185/1‑250 (MQ=255)                                                              tCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCAt                                                                                                                                                                                       >  1:67866/1‑251 (MQ=255)                                                              ccgctcccgctacACGCAGGCCCGGCCGGGAGTTTGGCGCCCCGCAGA‑CG‑A‑TGTCCAGCGGGCGATCGCCGCCGACATGCACTTTGGTCGCCCGCAGTTTGTCAGCGTGCGGATGCTGCGCACACTC‑ACCCCCTCCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAGCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCAt                                                                                                                                                                                       <  1:254287/250‑1 (MQ=255)                                                                gctaccgctacACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTc                                                                                                                                                                                     >  1:142720/1‑251 (MQ=255)                                                                cctcccgctccACGCAGTCCCGGACGGCATTTTGGCGCCCCCCAG‑‑CG‑AATGTCCAGCAGGCGAACCCCGCCGAAATTCATTTTTGTCACTCGCAGTTTGTCGGCTTGCGGATGCTGCCCACACCC‑ACCCCCTCCACCAACGACC‑CCGCCGTGGAAGCTGCCGGCACCCGGTTCTACACCTT‑CAACTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTc                                                                                                                                                                                     <  1:471568/247‑1 (MQ=255)                                                                               agccccTGACGGCATTTGGGCGCACCGCAGA‑CG‑A‑TGCCCAGCAGGCGATCCCCCCCGACATTCACTTTTGCCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACAC‑AACCCCTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGC‑AAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTc                                                                                                                                                                      <  1:379740/248‑1 (MQ=255)                                                                                     gggcgacAGTTTGGCGCACCGC‑GG‑CGTA‑TGTCCAGCAGTCGTTCGCCGCCGACATTCCCTTTGGTCACCTGATGTTTGTCAGCGTTCGGTTTCTGC‑CCCCCTCTAACCCCTTCCCCACCGCCC‑CCGCGGTGGAGGCTGCCGGCAACCTGTTCTACCCTGT‑CAACTCCAAGGTCCGCCAGAGTGATTTGATTTGCCAGCGCATCTCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGaa                                                                                                                                                                <  1:45337/245‑1 (MQ=255)                                                                                      gACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAAt                                                                                                                                                               >  2:491613/1‑251 (MQ=255)                                                                                           cAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCAt                                                                                                                                                          >  1:74756/1‑251 (MQ=255)                                                                                            aGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCAt                                                                                                                                                          >  2:119607/1‑250 (MQ=255)                                                                                             gttgggCGCCCCGCAGA‑CG‑A‑TGCCCAGCAGGTGAGCGCCGCCGACATCCCCTTTTGTCGCACGCAGTTTGCCAGCGTTCGTAGGCGGCGCACCCTC‑AACCACTTCCCCACCGACC‑GCGCCGTGGAGGCGGCGGGCATCCGTTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTGGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCAGTCGCGTAACCACAGTTCACTGAATTTCATa                                                                                                                                                         <  1:104973/246‑1 (MQ=255)                                                                                                     ccccgcgca‑CG‑A‑TGTCCAGCGGGCCGTCGCCCCCGACATTCGCTTTTGCCCCACGCATTGTGTCAGCGTCCGGAGGCTGCGCCCCCTC‑ACCCACTTCCCCACCCCCC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTcc                                                                                                                                                <  1:381340/243‑1 (MQ=255)                                                                                                                       ccAGCAGGCGATCGCCGCCGACACTCACTTTTGTCACACGCCGTTTGCCCGCGTTCGGATGCTGCGCCCACTC‑ACCCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCCACCGGCTCTACACCGT‑CAACTTCCAGGCCCGCCATAGCGACTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGCTCCCCCATTCGCGTAACCACAGTCCACTGAATTTCATAATCTATTCCATCCTTCTTTAAACt                                                                                                                                 >  2:423439/1‑251 (MQ=255)                                                                                                                                gATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATACTCTATTCCTGCCTTATTTAAACTGTTTGAgg                                                                                                                         >  2:166470/1‑250 (MQ=255)                                                                                                                                       gccgACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAACCGc                                                                                                                   >  2:47214/1‑249 (MQ=255)                                                                                                                                         cgACATTCACTTTTGCCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACCCTC‑ACCCCCTCCACCAACGCCC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACCCCGT‑CAACTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGAt                                                                                                               <  1:294285/251‑1 (MQ=255)                                                                                                                                           aCATTCATTTTTGCCACACGGAGTGTGCCAGCGTTCGGATGCTGCGCACACTC‑AACCCCTCCCCCACCGACC‑ACGCCGGGGAAGCTGCCGGCAACCGTTTCTACACCGT‑CACCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCg                                                                                                             <  1:309499/251‑1 (MQ=255)                                                                                                                                              ttactttttGTCACACGCATTTTGTCAGCGTTCGGATGCTGCGCCCACCC‑AACCCCTCCCCCAACGCCC‑CCGCCGGGGAAGCTGCCGGCAACCGGTTCTACCCCGT‑CAACTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGtt                                                                                                           <  1:404185/245‑1 (MQ=255)                                                                                                                                               ccACTTGTGCCACACGCGGTTTAGCAGCGTGCGGATGCTGCCCCCACAC‑AACC‑CCTCCCCAACCACCCACGCCGGGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTCCCGGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGtt                                                                                                           <  2:142720/248‑1 (MQ=255)                                                                                                                                                        ccacaCGCAGTTTGTCAGCGTCGGGATGCTGCGCACCCTC‑ACCCACTCCCCCAACGCCC‑CCGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATg                                                                                                <  1:150005/250‑1 (MQ=255)                                                                                                                                                           cccgacgttgttcagcgtccgaagtctgcCCACACAC‑AACCACTTCCCCAACGACC‑CCGCGGTGGAGGCTGCCGGCACCCGTTCCTACACCGT‑AACCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAAc                                                                                             <  2:146334/226‑1 (MQ=255)                                                                                                                                                                           gTTCGGATCCTGCGCACACCC‑AACCACTTCAGCGACGACC‑ACGCCGTGGAAGAAGCAGGCAACCGATTCTACACCGC‑CAACTTCCAGGCCCGCCATCGTGATTTGATTTCCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATACGCGTAACCACCGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCCGATCGTTTTAGAAGAATGAACGCAGGTCGGTGACGcc                                                                             >  2:337678/1‑251 (MQ=255)                                                                                                                                                                              cggatcaggcccacaCTC‑AACCGCTCCCCCAACCCCC‑ACGCCGGGAAATCCGCCGGCAGCCGGTGCTACACCGA‑CACGTTCCTGCCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAAGTTCAGAATCTATTCCTGCCTTATGTAAACTGGTTGTGGAAACGCAGATCGTTTTCTAAGAATGAACGCAGGTCGGGCACGCCGTa                                                                          <  2:527896/240‑1 (MQ=255)                                                                                                                                                                                gATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAAc                                                                        >  1:396753/1‑251 (MQ=255)                                                                                                                                                                                                     aCTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTcc                                                    >  1:204118/1‑251 (MQ=255)                                                                                                                                                                                                        cccccAACGACC‑ACGCCTGGGAAGCGGCCGGCACCCGGTTCTAC‑CCGTTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatc                                                 <  1:59674/248‑1 (MQ=255)                                                                                                                                                                                                         tccccaccaccccccccGTGGCACCTGCCGACACCCGTTTCTCCCCCGT‑CACCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGTGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccat                                                  <  1:99397/235‑1 (MQ=255)                                                                                                                                                                                                          cccaccGACC‑CCGCCGTGGAAGCTGCCGGCAACCGGTTCTACCCCGT‑AAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatccc                                               <  1:73407/246‑1 (MQ=255)                                                                                                                                                                                                              ccgctctcccgatcggaacctcccGGCAACCGGTTCTCCCCCGT‑CACCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatccccat                                            <  2:333547/229‑1 (MQ=255)                                                                                                                                                                                                                cgcccccGCCGTGGAAGCGGCCGGCACCCGTTTCTACCCCGT‑CAACTCCCAGCCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatccccatcc                                          <  1:132567/245‑1 (MQ=255)                                                                                                                                                                                                                     aCGCCGTGGAAGCTGCCGGCAACCGGCTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAACCTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGa                                       >  1:218649/1‑249 (MQ=255)                                                                                                                                                                                                                             gAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCCGACGCTCCATCCCCATCCCGAAGGCGAAAcc                             >  1:246753/1‑251 (MQ=255)                                                                                                                                                                                                                             gAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatccccat                                            >  1:333547/1‑236 (MQ=255)                                                                                                                                                                                                                               aGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAAcc                             >  1:240671/1‑249 (MQ=255)                                                                                                                                                                                                                                         aaCCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGAGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGCGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTc                 >  1:78362/1‑251 (MQ=255)                                                                                                                                                                                                                                             ggTTCTCCACCGA‑CACCTCCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCggg             <  1:491613/251‑1 (MQ=255)                                                                                                                                                                                                                                             ggTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCggg             >  1:175891/1‑251 (MQ=255)                                                                                                                                                                                                                                                  ccaccccgccAACTGCCAGCCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGGAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGGCGGTGACGCCGTAACGCAACATAGGCAGACGCTCCATCCCCATCCCGAATGCGAAACTAGAGTAAGCTGCCGGGTCg          <  2:299189/241‑1 (MQ=255)                                                                                                                                                                                                                                                        gT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAAc  >  1:172878/1‑251 (MQ=255)                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                    GTTCGCCACGCAGTTTCGCCGCTTTAATTTTGAAATCACCCGGCAGAACAGCACCAA‑TGGTCGCTACCGCTACACGCAGGCCCTGACGGCAGTTTGGCGCACCGCAGA‑CG‑A‑TGTCCAGCAGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTC‑AACCACTTCACCAACGACC‑ACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGT‑CAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAAC  >  NC_000913/1797605‑1798096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑