Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 651,297 | 0 | A | G | 26.4% | 148.9 / 11.1 | 72 | F187S (TTC→TCC) | citC | citrate lyase synthetase |
Reads supporting (aligned to +/- strand): ref base A (15/38); new base G (19/0); total (34/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.58e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACA > NC_000913/651054‑651546 | gTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAAGTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTga < 2:289048/251‑1 (MQ=255) aCAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAAtctt < 1:595091/251‑1 (MQ=255) aaGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATTATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGTGAAGCGTGAAGAATCTTCttt < 2:408302/251‑1 (MQ=255) aaGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCttt < 2:227616/251‑1 (MQ=255) ggTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGAc < 2:529364/251‑1 (MQ=255) gTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACt < 1:483578/251‑1 (MQ=255) cAGTACCGGCAAATCGGTGAGTTCCACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAAGTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTAAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATGCGGAGCCACGATGCACAGTCAGTCTGGGAATAGCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTaaa < 2:609083/251‑1 (MQ=255) ccGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGCGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCCGCCGGTCTTTAT‑A‑GGGGAAGCGTGAAGAATCTTTTTTTGCTaaaaaaa > 1:553202/1‑248 (MQ=255) aaGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAATCCAGCCGGGCTTCAT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAAATGCa > 1:530153/1‑250 (MQ=255) gTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTGTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGGGGAATATCGGCGGTGGCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAG‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGt < 1:421553/251‑1 (MQ=255) ttACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAATCCAGCCGGGTTTCAT‑A‑AGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAAATGCCACC‑AGTCGCAc > 1:164995/1‑251 (MQ=255) ccAGCGCGGGAGCGAGGTAATGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑cc < 2:585754/251‑1 (MQ=255) gctggAGCTAGGTACTGACGGAAAATCTGCAGATCAATGTCGGTGTAACAAGGGTTAATGACGCTCGGTTCTTTAATGAAGTAGCAAGGGAACGTAGCTCTGGAGAGTATGTATTCGGAGCCACGATGCACAGTCAGGCGTGTAATATCGGCGGTGCCTGTTAACA‑CC‑AAATCCAGCCGGACGGCAG‑A‑GGTGAAACGTGAACAATCTTCttt < 2:668811/209‑1 (MQ=255) gggAGCGAGGTCCTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTCATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGGCCTTTTAACA‑CC‑AAAACCCGCCGGGCTTC‑T‑ATGGGGGAGCGGGAAGAATCTTCTTTTACTACAAACAGATGCAACC‑CGTCGCCCTGTG‑CCGCAGccc > 2:663425/1‑250 (MQ=255) gCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTg < 2:330644/251‑1 (MQ=255) gCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTg < 1:544461/251‑1 (MQ=255) gTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCt < 1:164489/242‑1 (MQ=255) gTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCCTTTTACA‑CC‑AAAACCAGCCGGTCTTCAT‑A‑GGGGGAGCGGGGAGAATCTTTTTTGTCTAAAAACAGATGCAACC‑AGTCGCACTGTG‑GCGCCGCCtatatcgga > 2:164489/1‑242 (MQ=255) cTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCCTTTAACA‑CC‑CAATCCAGCCGGTCTTTCT‑A‑GGGGGAGCGTGCAGAATCTTTTTTTAATAAAAACAGATGCAACC‑ACTCGCACGGTG‑GCGCCGCCTGTTTAATCAggt > 1:381575/1‑249 (MQ=255) aGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGt < 2:627190/251‑1 (MQ=255) aTCAATTTCGGTGTAACAATGGTTAATGGCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGGCAGGCGTGGAATATCGGCGGTGCCTTTTAACC‑CC‑AAATCCAGCCGGGCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAAGCAGATAACGGTGACCATTCGTaa < 2:272886/251‑1 (MQ=255) aTCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAGCC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATGACGGTTACCATTCGTaa < 1:504789/251‑1 (MQ=255) tCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑t < 2:278825/250‑1 (MQ=255) tCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑t < 2:239962/250‑1 (MQ=255) aaCAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTtc < 2:530153/251‑1 (MQ=255) aaTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTAAA‑CC‑CAATCCAGCCGGGCTTCAT‑A‑GGGGGAGAGTGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGGCCATTCGTAAA‑GGGA‑TTgggcgatcgg > 1:271376/1‑243 (MQ=255) aaTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGc < 2:271376/244‑1 (MQ=255) gTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTAAA‑CC‑AAAACCAGCCGGGCTTCAT‑T‑GGGGGAGCGGGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCCCCGTG‑CCGCAGCCCGTTGAATTAGAAAACGGTGACCATTCTTAAA‑AGGA‑TTGGCGTtcatccca > 1:311540/1‑247 (MQ=255) gtAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑t < 1:505451/250‑1 (MQ=255) aaTGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTGGGAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGc < 1:550689/251‑1 (MQ=255) aCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTTACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGGGACCATTCGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGcc > 1:191246/1‑251 (MQ=255) tctGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGGCCTTTTTACA‑CC‑AAAACCAGCCGGTTTTCCT‑A‑GGGGAAGGGTGAAAAAACTTCTTTTACTCAAAACAAATGCAACC‑CGTCGCACTGTG‑GCGCAGCCCGGTGAAACAGATAACCGCGACCATTCGGAAA‑GGGA‑TTGGCGTTTATCAC‑AA‑TGAAGCCAATc > 1:149117/1‑251 (MQ=255) aaTGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGATCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCGTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAAGCAGATAACGGTGACCATTCTTAAA‑GGGA‑GTGGCGTTCATCAC‑AA‑AGCAGCGAATCTTGGTCCCTg < 2:631134/251‑1 (MQ=255) aaTGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTAAA‑CC‑AAATCCAGCCGGCCTTCAT‑A‑GGGGGAGCGGGAAGAATATTTTTTGACTAAAAAAAGATGCAAAC‑ACACGCCCCGTG‑CCGCAGCCTGTTGAATCAGATAACAGGGACCATTCGTTAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TTCAGCCAATATTGTTCCCTg > 1:481735/1‑251 (MQ=255) aaGTAGCAAGGGACCGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCTGGGCTTCATCA‑GGGGAA‑CGTGAAGAATCTTTTTTGACTAAAAACACATGCAACCCAG‑CGCACTGTG‑GCGCAGCCTGTTGCAACAGATAAAGGGGGCCATTCGCAAA‑GGGC‑TTGGCGGTCATCAC‑AA‑TGCCGCCAATCTTTGTCCCTGGagt > 1:442158/1‑249 (MQ=255) aaGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAAACCAGCCGGGCTTCAT‑T‑GGGGGAGCGGGGAGAATCTTCTTTTACTAAAAACCGATGCAAAC‑AGTCGCCCTGTG‑CCGCAGCCCGTTGAATCAAATAACGGGGACCATTCGTTAA‑GGGG‑TTGGGGCTCATCCCCAA‑T‑CAGCCAAACTTGTTTCCttggtg > 2:170228/1‑246 (MQ=255) aaGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCATTTTAACA‑CCCAATTCCACCCGG‑CTTTCT‑A‑GGGGGAGCGTGAAGAATTTTCTTTGACTAAAAAAAGATGCAACC‑AGTAGCAATGTGGCCGC‑GCCCGTTGAATCAGATAACGGGGACCATTCGTAAA‑AGGAGTTGG‑GTTCAT‑AC‑AAATGCAGCCCAACTTGTTTCCTgggtg > 1:275659/1‑248 (MQ=255) gCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTCTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAAAGGGGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGa > 1:192948/1‑250 (MQ=255) aaGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAAt < 1:555967/251‑1 (MQ=255) aaCGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTGGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGGTCCCTGGATTACGAAAtttttt < 2:625422/251‑1 (MQ=255) ggcgGGAGATGAGGTATGCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGAt < 2:218526/250‑1 (MQ=255) cgGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAATCCAGACGGGCTTCAT‑A‑GGGGGAGCGGGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCCCCCTGTG‑CCGCCGCCTGTTGAATCAGATAAAGGGGACCATTCGTAAA‑GGGG‑ATGGCGGTCCTCCC‑AA‑TGCAGCCCATCTTGTTCCCTGGGTGAAGAAAtttttttcgcggttt > 2:97857/1‑242 (MQ=255) agaTGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAAATCAGCCGGTCTTCAT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑GCGCAGCCTGTTGAATCAGATAAAGGTGACCATTTGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAAACTTGTTTCCTGGATGACGAAAATTTTTCAGCGAATCGGc > 1:366445/1‑250 (MQ=255) gatgatGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTAAA‑CC‑AACTACAGGCGGTCTTCAT‑A‑GGGGGAGGGAGAAGAATATTTTTTGCCTAAAAAAACATGCAACC‑AGTTGCACTGTG‑CCGCCGCCTGTTGAATCAAGTAAAGGTGACCCTTCGTAAA‑GGGA‑ATGGCGTTCATTAC‑AA‑AGCAACCAATATTGTTCACTGGATGACGAAATTTTTTTAGAGATTTGGc > 1:114585/1‑249 (MQ=255) atgatgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCCTTTAACAACC‑AATTCC‑CCCGGCCCTACT‑A‑AGGGGAGCCTGGAAAATCTTTTTTTACTAAAAAAAGAAGCAACC‑AGGCGCACTGTG‑CCGCCCCCTGTTGAATCAGAAAACGGTGGCCATTCGTAAAAGGGA‑T‑GGCGTTTCTCAC‑AA‑TGCAGCCCATCTTGTTTCCCGGAAGACGCAATTTTTTTAGCGCTTCGGCAtt > 1:85600/1‑250 (MQ=255) tgatgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGGCTTTTAACA‑CC‑CCAACAAACCCGTCTTCAT‑A‑GGGGGAGCGGGGAGAATCTTCTTTTAATAAACACAGATGCCACC‑AGTCGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGTGAACATTCGTAAA‑GGGA‑TTGGCGGTCATCAC‑AA‑TGCAGCCAAACTTGTTTCCTCGGTGGCGGAATTTTTTTAGCGAtttgtcata > 2:397505/1‑243 (MQ=255) tgatgTATTCGGAGCAACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑CAATCCAGCCGGGCCTCCT‑A‑GGGGGAGCGGGAAGAAGCTTCTTTGACCAACAACAGCAGCAACC‑AGACGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGGGATCATTCCTAAA‑GGGG‑TTGGCGGTCATCAC‑AA‑TGCAGCCAATCCTTTTCCCTGGATGCCGAAATTTTTTTAGCGATTTGGcct > 1:499938/1‑247 (MQ=255) atgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATAACGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTGGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TGGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTGCCCTGTATGACGAAATTTTTTCAGCGATTCGGCATAGCg < 2:669959/251‑1 (MQ=255) tgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCCTTTAACA‑CC‑AAAACCAGCCGGTCTTCCT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AATCGCCCTGTG‑CCGCAGCCTGTTGAATCAGATAACGGGGACCCTTCGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTTTTCCCTGGATGACGAAATTTTTTTCGCGATTCGGCATAACGt > 1:475861/1‑251 (MQ=255) aTTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGttt < 1:199609/250‑1 (MQ=255) gCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACA‑CC‑AAATCCAGCCCGGCTTTCT‑A‑GGGGGAGCGGGAAGAATCTTCTTTGTCTAAAAAAAGATGAAAAC‑AGGCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGGGACCATTCGTAAA‑GGGG‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTTGATGACGAAATTTTTTTAGCGATTCGGCATATCGGTTCAATcgcg > 1:501165/1‑251 (MQ=255) gCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCCTTTTACA‑CC‑AAAACCAACCGGGCGTCCT‑A‑TGGGGAGGGGGGAGAATCTTTTTTTACTTAAAAAAAAAGCAAAC‑AAGCGCACTTTG‑CCGCAGCCTGTTGAAACAGAAAAAAGGGACCATTCGTAAA‑GGGG‑TTGGGGTTTCTAAC‑CA‑AGCAGCCCAACTTTTTCCCCTGATGAAGGAATTTTTTTTGCGATTCTGCATAGCggttttatcgcg > 2:153886/1‑240 (MQ=255) aGTCAGGCGTGGAATATCGGCGGTGCCTTTTTACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑AGGGAAGCGTGAAGAATCTTCTTTGGCTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGAAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGG‑ATGGCGTTCATCAC‑AA‑AGCAGCCAATCTTGTTCCCTGGGTGACGAAATTTTTTTAGCGGTTTGGCCTTGCGTTTCAGTCGCGGGGGGCTGtttt > 1:572009/1‑251 (MQ=255) aGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGtttt < 1:97857/251‑1 (MQ=255) cAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGTCGTTCAGCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACTAAATTTTTTCAGCGAGTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTcc < 1:411175/250‑1 (MQ=255) cggcggTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACg < 1:663425/251‑1 (MQ=255) ccTTTTAACG‑CC‑AAACCCAGCCGGTCTTCAT‑A‑GTGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGGTGAAGCAGATAACGGTAACCATGCGTAAA‑GGGA‑TTGGCGTTCAGCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCTCGTGGCGCTGTTTTCCAGCAGCTCCATCACGCCGGGTAc < 2:443840/251‑1 (MQ=255) ttttacaa‑cC‑AAATCCAGCCGGTCTTCAT‑C‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCCACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGCTAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATCGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGTGTACGc > 2:197673/8‑251 (MQ=255) tAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTgg > 2:128714/1‑251 (MQ=255) ccc‑AAAGCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTGGCACTGTG‑CCGGAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAg < 2:8938/250‑1 (MQ=255) aaaTCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGCTGAATCTTCTTTGACCAAAAACAGATGCAACC‑AGACGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGAGACCATTCGTAAT‑GGGC‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTACCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCCCGCCGggtccgcgggtccgcgg > 2:261047/1‑250 (MQ=255) aaTCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTg > 1:128955/1‑251 (MQ=255) aGCCGGTCTTCAT‑A‑GGGTAAGCGTGAAGAATCTTCTTTGACTAACAACAGATACAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAACCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCAGCATAGCGTTTCAGTAGCATGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGaac > 1:329882/1‑249 (MQ=255) aGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAACCAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCCGCACCATCACGCCGGGTACGCTGGTCAGCGTGGaaa > 2:395720/1‑250 (MQ=255) cGGTCCTCAT‑A‑GGGGAAGCTTGAAGAATCTGCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGAGAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTCTTTGCCATCAGCACCAGCACGCCGGGTACGCTGGGCAGCGTGGAAAAAcc < 2:114585/251‑1 (MQ=255) ggTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCg > 2:514015/1‑251 (MQ=255) ttCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑CGTCGCACTGTG‑CCGCAGCCAGTTGAAACAGCTAACGGTGACAATTCGAACA‑GGGA‑ATGGCGTTCATCAC‑AA‑TGCAGCCCATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACt > 1:640868/1‑251 (MQ=255) ttCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGGTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCAc < 2:553202/250‑1 (MQ=255) tCAT‑A‑GGGAAAGCGTGCAGAGTCTTCTTTGACTACAAAAAGATGCCACG‑AGTCGCACTGTG‑CCGCCGCCTGTTGAATCAGATCACGGTGACCATTCGTCAA‑GGGA‑TTGGCGTTCATCAC‑AC‑TGCAGCCAATCTTGTTCCCTGGATGACGAACTTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCCCGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTg > 2:629092/1‑251 (MQ=255) ggAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGAGTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCTCTGGCGGAAc < 2:314153/251‑1 (MQ=255) gAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACa < 1:581641/251‑1 (MQ=255) gAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACa < 1:333008/251‑1 (MQ=255) | GTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGCCTTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGTCAGCGTGGAAAAACCGCACTGGCGGAACA > NC_000913/651054‑651546 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |