| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 651,267 | 0 | A | T | 26.8% | 132.5 / 16.7 | 71 | L197* (TTA→TAA) | citC | citrate lyase synthetase |
| Reads supporting (aligned to +/- strand): ref base A (14/38); new base T (19/0); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.45e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGG > NC_000913/651026‑651516 | gTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑GC‑TTTTTacaaccaa > 2:333008/1‑245 (MQ=255)gTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTAACA‑AC‑aaa > 1:585754/1‑250 (MQ=255) tAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGAGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTTACA‑CC‑CAATc > 1:264665/1‑251 (MQ=255) gcgcATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCa < 1:6722/251‑1 (MQ=255) cgcATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACACAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCGCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCGGGCGTGGAATATCGGCGGTG‑TC‑TTTTAACA‑CC‑AAATCCAg < 2:493025/251‑1 (MQ=255) cATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAagccagcc < 1:519153/251‑1 (MQ=255) cATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGcc < 1:368559/251‑1 (MQ=255) atCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACGGAGGGAAAATTTTCAGATCAATTTGGGTGAAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGAAGCAGGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCAACGATGCAAAGTAAGGGGTGGAATATGGGCGGGG‑GC‑TTTTAAAA‑CC‑AAAATCAGCCggg > 1:469038/1‑250 (MQ=255) atCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTAACGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTTACA‑CCCAAATCC‑GCCGGt > 1:605841/1‑251 (MQ=255) ccTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTCACGACAAACCGGTGAGTTACACCCAGCGCGGGAGCGAGGCACTGACGGAAAACCTTCAGATCAATTTCGGTGTAACAATGGCTACTGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGCGCCACGATGCACAGTCAGGCGTGGACTATCGGCGGTG‑CC‑TTTTTACA‑AC‑AAATCCAGCCggcct > 1:631134/1‑248 (MQ=255) gttgtgcggggCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACC‑CC‑AAATCCAGCCGGTCTTCAt < 2:63711/243‑1 (MQ=255) gTTGTACTGGGCGGTAAAGCGACAAAAGGGTTTAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTGGCC‑TTTTaaaacacatcccaacggggttcat > 2:351351/1‑229 (MQ=255) cTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CCCTTTTAAAA‑CC‑AA‑TCCCGCCGGGCTTTAT‑A‑ggggg > 1:239962/1‑250 (MQ=255) gTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAAGTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTga < 2:289048/251‑1 (MQ=255) aCAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAAtctt < 1:595091/251‑1 (MQ=255) aaGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATTATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGTGAAGCGTGAAGAATCTTCttt < 2:408302/251‑1 (MQ=255) aaGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCttt < 2:227616/251‑1 (MQ=255) ggTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGAc < 2:529364/251‑1 (MQ=255) gTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACt < 1:483578/251‑1 (MQ=255) cAGTACCGGCAAATCGGTGAGTTCCACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAAGTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTAAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATGCGGAGCCACGATGCACAGTCAGTCTGGGAATAGCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTaaa < 2:609083/251‑1 (MQ=255) ccGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGCGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCCGCCGGTCTTTAT‑A‑GGGGAAGCGTGAAGAATCTTTTTTTGCTaaaaaaa > 1:553202/1‑248 (MQ=255) aaGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAATCCAGCCGGGCTTCAT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAAATGCa > 1:530153/1‑250 (MQ=255) gTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTGTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGGGGAATATCGGCGGTG‑GC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAG‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGt < 1:421553/251‑1 (MQ=255) ttACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAATCCAGCCGGGTTTCAT‑A‑AGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAAATGCCACC‑AGTCGCAc > 1:164995/1‑251 (MQ=255) ccAGCGCGGGAGCGAGGTAATGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑cc < 2:585754/251‑1 (MQ=255) gctggAGCTAGGTACTGACGGAAAATCTGCAGATCAATGTCGGTGTAACAAGGGTTAATGACGCTCGGTTCTTTAATGAAGTAGCAAGGGAACGTAGCTCTGGAGAGTATGTATTCGGAGCCACGATGCACAGTCAGGCGTGTAATATCGGCGGTG‑CC‑TGTTAACA‑CC‑AAATCCAGCCGGACGGCAG‑A‑GGTGAAACGTGAACAATCTTCttt < 2:668811/209‑1 (MQ=255) gggAGCGAGGTCCTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTCATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTAACA‑CC‑AAAACCCGCCGGGCTTC‑T‑ATGGGGGAGCGGGAAGAATCTTCTTTTACTACAAACAGATGCAACC‑CGTCGCCCTGTG‑CCGCAGccc > 2:663425/1‑250 (MQ=255) gCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTg < 2:330644/251‑1 (MQ=255) gCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTg < 1:544461/251‑1 (MQ=255) gTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCt < 1:164489/242‑1 (MQ=255) gTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTTACA‑CC‑AAAACCAGCCGGTCTTCAT‑A‑GGGGGAGCGGGGAGAATCTTTTTTGTCTAAAAACAGATGCAACC‑AGTCGCACTGTG‑GCGCCGCCtatatcgga > 2:164489/1‑242 (MQ=255) cTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTAACA‑CC‑CAATCCAGCCGGTCTTTCT‑A‑GGGGGAGCGTGCAGAATCTTTTTTTAATAAAAACAGATGCAACC‑ACTCGCACGGTG‑GCGCCGCCTGTTTAATCAggt > 1:381575/1‑249 (MQ=255) aGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGt < 2:627190/251‑1 (MQ=255) aTCAATTTCGGTGTAACAATGGTTAATGGCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGGCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACC‑CC‑AAATCCAGCCGGGCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAAGCAGATAACGGTGACCATTCGTaa < 2:272886/251‑1 (MQ=255) aTCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAGCC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATGACGGTTACCATTCGTaa < 1:504789/251‑1 (MQ=255) tCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑t < 2:239962/250‑1 (MQ=255) tCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑t < 2:278825/250‑1 (MQ=255) aaCAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTtc < 2:530153/251‑1 (MQ=255) aaTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTAAA‑CC‑CAATCCAGCCGGGCTTCAT‑A‑GGGGGAGAGTGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGGCCATTCGTAAA‑GGGA‑TTgggcgatcgg > 1:271376/1‑243 (MQ=255) aaTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGc < 2:271376/244‑1 (MQ=255) aTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTc < 2:591699/135‑1 (MQ=255) gTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTAAA‑CC‑AAAACCAGCCGGGCTTCAT‑T‑GGGGGAGCGGGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCCCCGTG‑CCGCAGCCCGTTGAATTAGAAAACGGTGACCATTCTTAAA‑AGGA‑TTGGCGTtcatccca > 1:311540/1‑247 (MQ=255) gtAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑t < 1:505451/250‑1 (MQ=255) aaTGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTGGGAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGc < 1:550689/251‑1 (MQ=255) aCGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTTACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGGGACCATTCGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGcc > 1:191246/1‑251 (MQ=255) tctGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGG‑CC‑TTTTTACA‑CC‑AAAACCAGCCGGTTTTCCT‑A‑GGGGAAGGGTGAAAAAACTTCTTTTACTCAAAACAAATGCAACC‑CGTCGCACTGTG‑GCGCAGCCCGGTGAAACAGATAACCGCGACCATTCGGAAA‑GGGA‑TTGGCGTTTATCAC‑AA‑TGAAGCCAATc > 1:149117/1‑251 (MQ=255) aaTGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGATCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCGTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAAGCAGATAACGGTGACCATTCTTAAA‑GGGA‑GTGGCGTTCATCAC‑AA‑AGCAGCGAATCTTGGTCCCTg < 2:631134/251‑1 (MQ=255) aaTGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTAAA‑CC‑AAATCCAGCCGGCCTTCAT‑A‑GGGGGAGCGGGAAGAATATTTTTTGACTAAAAAAAGATGCAAAC‑ACACGCCCCGTG‑CCGCAGCCTGTTGAATCAGATAACAGGGACCATTCGTTAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TTCAGCCAATATTGTTCCCTg > 1:481735/1‑251 (MQ=255) aaGTAGCAAGGGACCGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCTGGGCTTCATCA‑GGGGAA‑CGTGAAGAATCTTTTTTGACTAAAAACACATGCAACCCAG‑CGCACTGTG‑GCGCAGCCTGTTGCAACAGATAAAGGGGGCCATTCGCAAA‑GGGC‑TTGGCGGTCATCAC‑AA‑TGCCGCCAATCTTTGTCCCTGGagt > 1:442158/1‑249 (MQ=255) aaGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAAACCAGCCGGGCTTCAT‑T‑GGGGGAGCGGGGAGAATCTTCTTTTACTAAAAACCGATGCAAAC‑AGTCGCCCTGTG‑CCGCAGCCCGTTGAATCAAATAACGGGGACCATTCGTTAA‑GGGG‑TTGGGGCTCATCCCCAA‑T‑CAGCCAAACTTGTTTCCttggtg > 2:170228/1‑246 (MQ=255) aaGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CA‑TTTTAACA‑CCCAATTCCACCCGG‑CTTTCT‑A‑GGGGGAGCGTGAAGAATTTTCTTTGACTAAAAAAAGATGCAACC‑AGTAGCAATGTGGCCGC‑GCCCGTTGAATCAGATAACGGGGACCATTCGTAAA‑AGGAGTTGG‑GTTCAT‑AC‑AAATGCAGCCCAACTTGTTTCCTgggtg > 1:275659/1‑248 (MQ=255) gCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTCTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAAAGGGGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGa > 1:192948/1‑250 (MQ=255) aaGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAAt < 1:555967/251‑1 (MQ=255) aaCGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTGGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGGTCCCTGGATTACGAAAtttttt < 2:625422/251‑1 (MQ=255) ggcgGGAGATGAGGTATGCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGAt < 2:218526/250‑1 (MQ=255) cgGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAATCCAGACGGGCTTCAT‑A‑GGGGGAGCGGGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCCCCCTGTG‑CCGCCGCCTGTTGAATCAGATAAAGGGGACCATTCGTAAA‑GGGG‑ATGGCGGTCCTCCC‑AA‑TGCAGCCCATCTTGTTCCCTGGGTGAAGAAAtttttttcgcggttt > 2:97857/1‑242 (MQ=255) agaTGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAAATCAGCCGGTCTTCAT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAAAAGATGCAACC‑AGTCGCACTGTG‑GCGCAGCCTGTTGAATCAGATAAAGGTGACCATTTGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAAACTTGTTTCCTGGATGACGAAAATTTTTCAGCGAATCGGc > 1:366445/1‑250 (MQ=255) gatgatGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTAAA‑CC‑AACTACAGGCGGTCTTCAT‑A‑GGGGGAGGGAGAAGAATATTTTTTGCCTAAAAAAACATGCAACC‑AGTTGCACTGTG‑CCGCCGCCTGTTGAATCAAGTAAAGGTGACCCTTCGTAAA‑GGGA‑ATGGCGTTCATTAC‑AA‑AGCAACCAATATTGTTCACTGGATGACGAAATTTTTTTAGAGATTTGGc > 1:114585/1‑249 (MQ=255) atgatgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTAACAACC‑AATTCC‑CCCGGCCCTACT‑A‑AGGGGAGCCTGGAAAATCTTTTTTTACTAAAAAAAGAAGCAACC‑AGGCGCACTGTG‑CCGCCCCCTGTTGAATCAGAAAACGGTGGCCATTCGTAAAAGGGA‑T‑GGCGTTTCTCAC‑AA‑TGCAGCCCATCTTGTTTCCCGGAAGACGCAATTTTTTTAGCGCTTCGGCAtt > 1:85600/1‑250 (MQ=255) tgatgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑GC‑TTTTAACA‑CC‑CCAACAAACCCGTCTTCAT‑A‑GGGGGAGCGGGGAGAATCTTCTTTTAATAAACACAGATGCCACC‑AGTCGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGTGAACATTCGTAAA‑GGGA‑TTGGCGGTCATCAC‑AA‑TGCAGCCAAACTTGTTTCCTCGGTGGCGGAATTTTTTTAGCGAtttgtcata > 2:397505/1‑243 (MQ=255) tgatgTATTCGGAGCAACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑CAATCCAGCCGGGCCTCCT‑A‑GGGGGAGCGGGAAGAAGCTTCTTTGACCAACAACAGCAGCAACC‑AGACGCACTGTG‑CCGCCGCCTGTTGAATCAGATAACGGGGATCATTCCTAAA‑GGGG‑TTGGCGGTCATCAC‑AA‑TGCAGCCAATCCTTTTCCCTGGATGCCGAAATTTTTTTAGCGATTTGGcct > 1:499938/1‑247 (MQ=255) atgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATAACGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTGGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TGGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTGCCCTGTATGACGAAATTTTTTCAGCGATTCGGCATAGCg < 2:669959/251‑1 (MQ=255) tgTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTAACA‑CC‑AAAACCAGCCGGTCTTCCT‑A‑GGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AATCGCCCTGTG‑CCGCAGCCTGTTGAATCAGATAACGGGGACCCTTCGTAAA‑AGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTTTTCCCTGGATGACGAAATTTTTTTCGCGATTCGGCATAACGt > 1:475861/1‑251 (MQ=255) aTTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGttt < 1:199609/250‑1 (MQ=255) gCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACA‑CC‑AAATCCAGCCCGGCTTTCT‑A‑GGGGGAGCGGGAAGAATCTTCTTTGTCTAAAAAAAGATGAAAAC‑AGGCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGGGACCATTCGTAAA‑GGGG‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTTGATGACGAAATTTTTTTAGCGATTCGGCATATCGGTTCAATcgcg > 1:501165/1‑251 (MQ=255) gCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑CTTTTACA‑CC‑AAAACCAACCGGGCGTCCT‑A‑TGGGGAGGGGGGAGAATCTTTTTTTACTTAAAAAAAAAGCAAAC‑AAGCGCACTTTG‑CCGCAGCCTGTTGAAACAGAAAAAAGGGACCATTCGTAAA‑GGGG‑TTGGGGTTTCTAAC‑CA‑AGCAGCCCAACTTTTTCCCCTGATGAAGGAATTTTTTTTGCGATTCTGCATAGCggttttatcgcg > 2:153886/1‑240 (MQ=255) aGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTTACC‑CC‑AAATCCAGCCGGTCTTCAT‑A‑AGGGAAGCGTGAAGAATCTTCTTTGGCTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGAAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGG‑ATGGCGTTCATCAC‑AA‑AGCAGCCAATCTTGTTCCCTGGGTGACGAAATTTTTTTAGCGGTTTGGCCTTGCGTTTCAGTCGCGGGGGGCTGtttt > 1:572009/1‑251 (MQ=255) aGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGtttt < 1:97857/251‑1 (MQ=255) cAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGTCGTTCAGCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACTAAATTTTTTCAGCGAGTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTcc < 1:411175/250‑1 (MQ=255) cggcggTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACg < 1:663425/251‑1 (MQ=255) cc‑TTTTAACG‑CC‑AAACCCAGCCGGTCTTCAT‑A‑GTGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGGTGAAGCAGATAACGGTAACCATGCGTAAA‑GGGA‑TTGGCGTTCAGCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCTCGTGGCGCTGTTTTCCAGCAGCTCCATCACGCCGGGTAc < 2:443840/251‑1 (MQ=255) tAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTgg > 2:128714/1‑251 (MQ=255) | GTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGTG‑CC‑TTTTAACA‑CC‑AAATCCAGCCGGTCTTCAT‑A‑GGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACC‑AGTCGCACTGTG‑CCGCAGCCTGTTGAATCAGATAACGGTGACCATTCGTAAA‑GGGA‑TTGGCGTTCATCAC‑AA‑TGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGG > NC_000913/651026‑651516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |