| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 27.7% | 68.6 / 10.3 | 47 | V288G (GTG→GGG) | cusA | copper/silver export system RND permease |
| Reads supporting (aligned to +/- strand): ref base T (1/33); new base G (12/1); total (13/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCG > NC_000913/599327‑599826 | aaGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtg < 1:671981/251‑1 (MQ=255) aaaGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGGTCGTCGATCGAACGGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATc < 2:45045/251‑1 (MQ=255) gcgcgcTGGATGCGTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAAGATATGGTGCGCGCCAGCGGCTATCTGCAAACGCGCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTAGCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTg < 2:71308/251‑1 (MQ=255) cgcgcTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGc < 1:150239/251‑1 (MQ=255) gATGCGTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATGGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑gg < 2:337665/251‑1 (MQ=255) gcggTTCGTCGATCGAACTGGCGGAAGCGGAAAATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATc < 2:641438/251‑1 (MQ=255) gTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATcgcc < 1:439946/251‑1 (MQ=255) cgtcgATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCTATCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCgccgcc < 2:92673/251‑1 (MQ=255) gaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑a < 1:367201/251‑1 (MQ=255) aagcggaaTATATTGTGCGCGCCGGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑aa < 2:350342/251‑1 (MQ=255) aagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑aa < 1:45924/251‑1 (MQ=255) ggcggaaTATAGGGTGCGCGCAAGCGGCTATCTACAAACCCTCGACGACTTTAATCACATCGTTTGAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTGGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑aaa < 2:612834/250‑1 (MQ=255) atatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGaa < 1:132244/250‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTGGCGAATGTCCAGATTGGCCCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAGGGCGAGGTGACGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCGCGATAAGCTATCTCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAagt < 1:398174/250‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGACCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTGCTGCGATCC‑GG‑CAAAAACGCCCCAGGAGTGACTGGCGCCGGGGAGGACAAACCG‑G‑GAACGCTGTAAagg > 1:67659/1‑249 (MQ=255) gggcgccagggtcaaacTGCAAACGCTCGCCTACTTTAATCGCATCGTTTTAAAAGCCAGTAAAAAGGGCGTGCCCGTTTATCTGCGTGATGTTGCGAAGGTCCAGATTGGCCCGTAGATGCGCAGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGTGGGGCGGGGTGGTGCTCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTc < 2:184326/235‑1 (MQ=255) aaaCGCTCGACGCCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATa < 1:521034/251‑1 (MQ=255) cGCTCGACGACTTTAATCACATCGTTTTACAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAGCC‑GG‑CCACAACGCCCGGGAAGGGATCGGCGCCCTGGAGGGGAAACTGTG‑AAA‑GCTGGAAAATAGTCTggcgcggaggggggggggaaat > 2:667081/1‑230 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCCGG‑CAAAAA‑GCCCGGGAAGGGATAGGCGCCGGGGAGGGCAAAATG‑G‑GAACGCTGAAAAGTAGGCTGCCGGGCGGCGGGGGGATAGTTtcaac > 1:71665/1‑251 (MQ=255) cgccttgactcacttcgctgtAAAAGCCAGTGAAAATGGCGTGCCCGTTTACCGGCGCCATGGTGCGAAGGTCCAGATGGGCGCGGAGAGGCGCCGGGGTATTGCGGAAGTAAACGGGGAAGGCGAAGTCGCGGCCGTGTTGCTGATCCTACGCTCC‑TG‑CAGAAAGGCCCTAGAAGTGATCGCCGCCGTGAAGGACACGCTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAATGCGTGTAGGTAGTTCCAACAt < 2:672507/231‑1 (MQ=255) aaTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATc < 1:590646/250‑1 (MQ=255) aTCACAGCGTTTTAAAAGCCAGGGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATGGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAATTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGGGTGGAGATAGTTACAGCATACGATCGc < 2:660695/251‑1 (MQ=255) acaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCC‑GG‑CCAAAACGCCCGAGAAGTGGTCGCCGCCGCGAAGGGAAAACAG‑G‑AAAAGCTGAAAAGGAGTCTGCCGGAAGGCGTGGGGATAGGTACAACATACGAACGccac > 1:604277/1‑248 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagccag < 1:632621/250‑1 (MQ=255) ttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCa < 1:489507/250‑1 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGGACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATTCCGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGGAAAGGAATCTGGCGGGAGGCGGGGGGAGAGTTACAACATACGATCGcagacagccccttg > 1:333343/1‑244 (MQ=255) aGCCAGTGAAAGTGGCGTGCCCGTTTATCTGCGCGATGTGGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATGGCCGAACGAAACGGCGAAGGCGAAGTGGCGTGCGGGGTGGGGATCCTGCGATCC‑GT‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAGCGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc < 2:329834/251‑1 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGTCC‑GG‑CAAAAACGCCCGCGAAGTGATCGCCGCCGGGCAGGACAAACCG‑G‑AAACGCGGAAAAGTAGTCTGCCGGAAGGCGTGGAGGTAGTTTCAAAAAAAGAACGAAGCCAGCTccattaccc > 1:187542/1‑243 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcgc < 1:323396/251‑1 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGcc < 1:106718/251‑1 (MQ=255) aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGCGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGGTATGCGATCC‑GG‑CCAAAACGCCCGAGAAGTGAACGCCGCCGTGAAGGACAAACCG‑G‑GAACGCTGGAAAGTATTCTGCCGGCAGGGGGGGAGATAGTTACAAAATACGATCCCCGCCCGCTCAGTGACCGCGCCATCg > 1:329341/1‑251 (MQ=255) ggCGTGCCCGTTTATCTGCGCTATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGTCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACTCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa < 1:643297/251‑1 (MQ=255) ggggcgagggtGCGAAGGTCGCGATTGGCCCGGAGAGGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACTCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCGGAAAAGTAGTCGGCCGGAAGGCGTGGAGATAGTTACAACATACTATCGCAGCCAGGTCATTGACCGCGGCATCGACAACCGCAGCGGCAAGTTg < 2:315800/241‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAg < 1:459876/247‑1 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGt < 1:140169/250‑1 (MQ=255) tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCCGCGCTCC‑GGGCAAAAA‑ACCCCCGAAGGGGTCGCCGCCGCGGAGGACAAACTG‑G‑GAAAGCCGGAAAGGAGTCTGCCGGGAGGCGGGGGGATAGTTAAAACATACGATCGCAGCCAGCTCATTGTCCGCGCCATCGCCAACCCCAGCGGCCAGCTGCTGGTAGAGGTTTTtgtg > 2:500856/1‑251 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGGTCC‑GG‑CCAAAAAGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGGAGGCTGCCGGGAGGCGTGGGGATAGGTACAACATACGGTCGCTGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGGTGCTGGAAGAGGTTATTgtgg > 1:496450/1‑251 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGGTGCTGGAAGAGTTTAGTGTGGTGGCGGTAGTc < 2:67659/251‑1 (MQ=255) gtGCGCCGGGGGTGTGCCGAATGAAACGGAGAAGGGGAAGGGGCGGGAGGGGGGGTGAGCCGGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGGTGCTGGAAGAGTTTAGTGTGGTGGCGGTAGTCTGTgc < 2:218202/250‑1 (MQ=255) cGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGCTCCTGCGCTCC‑GG‑CAAAAACGCCCGAGAAGAGATCGCCGGCGCGAAGGGCAAACTG‑GGAAAC‑CCGAAAAGTAGTCTGGCGGGAGGGGTGGGGATAGTTACAACATACGGTCCCAACCAGCTCATTGAACGCGCCACCCACAACCTCCGCGGCAAGCTGCTGGTAGAGATTATTGTGGTGGCGGGAGGCtgtggggtgtt > 1:157783/1‑244 (MQ=255) ggggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTCGGTCC‑GG‑CCAAAACGCCCGAGCAGTGATTGCCGCCGTGAAGGACCAACTT‑G‑GAACGCTGTAAAGTAGTCTGCCGGGAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCCTTTACCCCGCCCTCGACAACCTCAGCGGCAAGTTTCTGGGAGAGTTTATTGTGGGGGCGGGAGGCTGTGCGCTGttt > 1:486049/1‑251 (MQ=255) ccGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAt < 1:436379/251‑1 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGAGATCC‑GG‑CAAAAACGCC‑GAGGAGGGATCGCCGCCGTGAAGGACAAACTG‑G‑GAAAGCTGAAAAGTAGGCTGCCGGGAGGGGGGGGGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGGAGAGTTTTTTGTGGGGGCGGGAGGCTGTGCGCTGGTTTTCTgggctgtggggtc > 1:649108/1‑240 (MQ=255) gaagTGTCGGGCGGGGTGGTGATCGTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCGGTGCGCTGTTTCTCTGGCATGTGCGCTCGTCGCTGGTGGc < 1:437496/251‑1 (MQ=255) gggggggTGGTGATCCGGCGGTCC‑GG‑GAAAAACGCCCGAGAAGTGATCGACGCCGAGAAGGACAAACTG‑G‑AAACGCTGAAAAGGAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTc < 2:379937/248‑1 (MQ=255) cgggGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt < 1:136210/251‑1 (MQ=255) ggggTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGCAGTGATCACCGCCGTGAAGGACACACTG‑G‑AAACGCTGACACGTCGTCTGCCGGAAGCCATGGAGATAGTTACAACATACGATCCCAGCTAGCCCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt > 1:316803/1‑251 (MQ=255) ggggTGGGGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt < 2:491730/251‑1 (MQ=255) gtggtgATCCTGAGATCC‑GG‑CAAAAACGCCCGAGAAGTGATAGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAACAGTAGTCTGCCGGCAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAACTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGCCTGTGCGCTGTTTCTCTGGCCTGTGCGCTCGGAGCTGGTGGCGATTATTTCGTTGcc > 1:324821/1‑251 (MQ=255) tggtgCTCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGCTCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAACAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTTGCGATTATTTCGTTGccc > 2:536874/1‑250 (MQ=255) | AAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCC‑GG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTG‑G‑AAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCG > NC_000913/599327‑599826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |