Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,488,473 Δ111,735 bp yjgRyjjA 100 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4488473 4600207 111735 78 [0] [0] 77 yjgR–yjjA yjgR,idnR,idnT,idnO,idnD,idnK,ahr,leuX,insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO,fecE,fecD,fecC,fecB,fecA,fecR,fecI,ykiE,insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 44884720 (0.000)77 (1.030) 73/488 0.1 100% intergenic (+72/+89) lptG/yjgR lipopolysaccharide transport system protein LptG/DUF853 domain‑containing protein YjgR
?NC_000913 4600208 = 0 (0.000)intergenic (‑19/+30) yjjA/dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC

TGCCTGCGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTC  >  NC_000913/4599958‑4600445
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cgtaccgatgggcgtgcgtgtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctgtattattgttagcaaagtgtgcttcgttcattcctgat                                                                                                                                                                                                                                                <  1:640028‑M2/1‑1 (MQ=255)
    ccgatgggcttgcgtgtggtcaccggtatcattttcgtttttgtcttctacgtactggaccagatcttcggcccgctgacgttggttgatggcaccccgccgatcatcggcgcactgttgcccagcgccagcttcttcttaatcagcctgttgctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTgtgt                                                                                                                                                                                                                                            <  1:336724‑M2/5‑1 (MQ=255)
    ccgatgggcgtgcgtgtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTgtgt                                                                                                                                                                                                                                            >  1:654910‑M2/247‑251 (MQ=255)
            cgtgcgtgtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTgtcgccagt                                                                                                                                                                                                                                    >  1:105066‑M2/239‑246 (MQ=255)
                   gtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaacgaatgaacgaataaagggagcgaaagctccattttttattgttagcaaagtgtgcttcgttcattcctgaTGGGTCGCCAGTATACCGcc                                                                                                                                                                                                                             >  2:265018‑M2/232‑251 (MQ=255)
                     ggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggatcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCa                                                                                                                                                                                                                            <  1:76770‑M2/21‑1 (MQ=255)
                     ggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGcc                                                                                                                                                                                                                             >  1:618211‑M2/230‑249 (MQ=255)
                            ggtatcagtttaggttttgtcttctacgtactggaccagctcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttattaatcagcctgtggctgttaatgagacaatcgtaaccgaatgaacgaatcaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTTTCGCCAGGATACCGACAGAAACggg                                                                                                                                                                                                                    >  2:677197‑M2/223‑251 (MQ=255)
                                tcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGAtt                                                                                                                                                                                                                >  1:572413‑M2/219‑251 (MQ=255)
                                 cagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgat                                                                                                                                                                                                                                                <  1:241116‑M2/1‑1 (MQ=255)
                                 cagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgat                                                                                                                                                                                                                                                >  2:241116‑M2/218‑218 (MQ=255)
                                   gtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAAt                                                                                                                                                                                                             >  2:282681‑M2/216‑251 (MQ=255)
                                     ttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATa                                                                                                                                                                                                            <  1:308556‑M2/37‑1 (MQ=255)
                                           tttgtcttctccctcctggaccaaatcttcggccccgtgccgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaagaaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCttt                                                                                                                                                                                                      <  2:221730‑M2/43‑1 (MQ=255)
                                           tttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCttt                                                                                                                                                                                                      >  1:532199‑M2/208‑250 (MQ=255)
                                           tttgtattctacgtactggcccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCttt                                                                                                                                                                                                      >  1:506318‑M2/208‑250 (MQ=255)
                                              gtcttctacatactggcccagatcttcggcccgctgccgttggtttatggcataccgccgatcatcggcgcactgttgcccagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggcgcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCt                                                                                                                                                                                                  >  2:323405‑M2/205‑251 (MQ=255)
                                                 ttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaataagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGt                                                                                                                                                                                                <  1:468304‑M2/49‑1 (MQ=255)
                                                     acgtactggaccagatcttcggcccgctgacgttggtttatggcaccccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTAccc                                                                                                                                                                                           <  1:453959‑M2/54‑1 (MQ=255)
                                                                      ttcggcccgctgacgttggtttatggcatcccgccgatcatcggagcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATcc                                                                                                                                                                          >  1:67462‑M2/181‑251 (MQ=255)
                                                                       tcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcatcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTAt                                                                                                                                                                            <  1:325285‑M2/69‑1 (MQ=255)
                                                                       tcggcccgctgacgtgggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaatctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATc                                                                                                                                                                           <  1:610502‑M2/70‑1 (MQ=255)
                                                                          gcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGt                                                                                                                                                                      >  1:355368‑M2/177‑251 (MQ=255)
                                                                                tgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGa                                                                                                                                                                   >  1:195032‑M2/171‑248 (MQ=255)
                                                                                           tatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACaa                                                                                                                                                      >  1:7185‑M2/160‑250 (MQ=255)
                                                                                             tggcttcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcgtcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGAGCACCCACAAAc                                                                                                                                                    <  2:654910‑M2/93‑1 (MQ=255)
                                                                                               gcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttactgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGACGATCACCCACAAACTGt                                                                                                                                                 >  2:260766‑M2/156‑251 (MQ=255)
                                                                                               gcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGt                                                                                                                                                 >  2:16646‑M2/156‑251 (MQ=255)
                                                                                                catcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGtt                                                                                                                                                <  1:135789‑M2/97‑1 (MQ=255)
                                                                                                   cccgccgatcatcggcgccctgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTAcc                                                                                                                                             <  2:355368‑M2/100‑1 (MQ=255)
                                                                                                    ccgccgatcatcggcgctctgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTGCCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTAccc                                                                                                                                            <  2:234397‑M2/101‑1 (MQ=255)
                                                                                                               cggcgcacggttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATAc                                                                                                                                  <  2:198132‑M2/111‑1 (MQ=255)
                                                                                                                ggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATc                                                                                                                                                              >  2:78464‑M2/139‑221 (MQ=255)
                                                                                                                ggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATc                                                                                                                                                              <  1:78464‑M2/83‑1 (MQ=255)
                                                                                                                  cgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgcatgaacgaataaagggagcgaaagctccctttattattgatagcaaagtgtgcttcgttcattcctgaTGTGTCGCCGGTATACCGCCAGAAACGGGGATTAATAATCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACCAACTGTTACCCAGGCGCAtacgttc                                                                                                                              >  2:28839‑M2/137‑248 (MQ=255)
                                                                                                                  cgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGGATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTc                                                                                                                              <  1:420530‑M2/115‑1 (MQ=255)
                                                                                                                   gcactgttgccaagcgccagcttctgcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctcccgttattattgttagcaaagtgtgcttcgttcagtccggaTGTGTCGCCAGGATACCGCCAGAAACGGGGATTAATACTCTTTTCCTGTTACCCGGCTACGGTAGCTATGCCAGTTGAATATCACCCACAAACTGTTACCCAGGCGCATACGGTcc                                                                                                                             <  1:620311‑M2/116‑1 (MQ=255)
                                                                                                                    cactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTcc                                                                                                                             >  1:625467‑M2/135‑250 (MQ=255)
                                                                                                                          tgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGTCTCATACGGTCCATCAcg                                                                                                                       <  2:618544‑M2/122‑1 (MQ=255)
                                                                                                                              aagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTc                                                                                                                  <  1:260766‑M2/127‑1 (MQ=255)
                                                                                                                                     agcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCAAGc                                                                                                           >  2:491049‑M2/118‑251 (MQ=255)
                                                                                                                                       cttcttcttaatcagcctgtggctgctaatgagaaactcgtaaccgaatgaacgactaaagggagcgaaagctccctttattattgttagcaaagtgagcttcgttcattcctgcTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTCCCCGGCTACGGTAGATATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGcac                                                                                                         >  2:60684‑M2/116‑250 (MQ=255)
                                                                                                                                            tcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACt                                                                                                       <  2:532199‑M2/138‑1 (MQ=255)
                                                                                                                                               taatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGt                                                                                                   <  2:431190‑M2/142‑1 (MQ=255)
                                                                                                                                                    agcctgtgactgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctcccgttattattgttagcaaagtgttcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCGTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTGGTAGATCACCCACAAACTGTTGCCCAGGCGCATACGTTCCATCACGCGTTCGCTCAGCAACGTGGTCATctct                                                                                            <  2:350573‑M2/149‑1 (MQ=255)
                                                                                                                                                         gtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCat                                                                                       <  1:13180‑M2/154‑1 (MQ=255)
                                                                                                                                                           ggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCatat                                                                                     >  1:483312‑M2/96‑251 (MQ=255)
                                                                                                                                                            gctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGGCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATAtt                                                                                    <  1:677197‑M2/157‑1 (MQ=255)
                                                                                                                                                                    tgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTgg                                                                            >  1:277731‑M2/87‑251 (MQ=255)
                                                                                                                                                                     gagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGt                                                                           >  1:266077‑M2/86‑251 (MQ=255)
                                                                                                                                                                                   cgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcatgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTACTACTCATTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACCAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATACCGGTTg                                                             >  1:52167‑M2/72‑251 (MQ=255)
                                                                                                                                                                                    gaatgaacgaataaagggagcgaaagctccctttattattgttagcaacgtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTgg                                                            >  2:596263‑M2/71‑251 (MQ=255)
                                                                                                                                                                                      atgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGc                                                          <  2:195032‑M2/183‑1 (MQ=255)
                                                                                                                                                                                           cgaataaagggagcgaaagctccctttcttattgttagcacagtgtgcttcgatcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTCCTGTTGGTCAGCATCCCGGTTGGGCGTTTg                                                     >  1:584928‑M2/64‑251 (MQ=255)
                                                                                                                                                                                               taaagggagcgaacgctccctttattattgttagcaacgtgtgcttcgttcattactgaTGTGTCGCCAGTATACCGCCAGACACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACACACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGga                                                   >  2:630016‑M2/60‑249 (MQ=255)
                                                                                                                                                                                                  agggagcgaaagctctccttattattgttagaaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCGAGAAGCGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTATCTATCCCAGTGGAAGATCACCCCCAAACTGTTACCCATGCGCAGACGGTCCATCACGCGTTCGCACCGCAACTAGTTCATCTCTTCCATAGTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGaagaag                                              <  2:360932‑M2/195‑1 (MQ=255)
                                                                                                                                                                                                      agcgcaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcg                                          >  2:531354‑M2/53‑251 (MQ=255)
                                                                                                                                                                                                      agcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTTCCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCTACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTGCTCCCAGCAGCTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcg                                          <  1:672717‑M2/199‑1 (MQ=255)
                                                                                                                                                                                                          aaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcggcg                                       >  1:23958‑M2/49‑250 (MQ=255)
                                                                                                                                                                                                                ccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATcgac                                 <  1:485036‑M2/208‑1 (MQ=255)
                                                                                                                                                                                                                  ctttattattgttagcaaagtgtgcttagttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGAt                              >  2:655586‑M2/41‑251 (MQ=255)
                                                                                                                                                                                                                   tttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATc                             >  1:281404‑M2/40‑251 (MQ=255)
                                                                                                                                                                                                                       ttattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcg                                          >  1:196857‑M2/36‑234 (MQ=255)
                                                                                                                                                                                                                       ttattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcg                                          <  2:196857‑M2/199‑1 (MQ=255)
                                                                                                                                                                                                                         attgttagcaaagtgtgcttcgttcattccagaTGTGTCGCCCGTATACCGCCAGAAACGGGCACTCATAATCTTTACCTGTTACCCGGCACCGATAGCCATCCCAGTTGAAGATCACACACACACTGTTACCCAGGCGCATACGGTCAATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATCTTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGCAGAAGAGCGGCGATCGAAGATCTGGTtg                       >  1:66110‑M2/34‑251 (MQ=255)
                                                                                                                                                                                                                            gttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtgat                     <  1:655586‑M2/220‑1 (MQ=255)
                                                                                                                                                                                                                              tagcaaagcgtgcttcgttcattcctgaTGTGTCGCCAGTCTACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCACCTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTgatgat                  >  2:407430‑M2/29‑251 (MQ=255)
                                                                                                                                                                                                                               agcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATc                 <  2:514607‑M2/224‑1 (MQ=255)
                                                                                                                                                                                                                                    agtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACttt            <  1:122101‑M2/229‑1 (MQ=255)
                                                                                                                                                                                                                                    agtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACttt            >  2:376175‑M2/23‑251 (MQ=255)
                                                                                                                                                                                                                                       gtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTc         >  1:165286‑M2/20‑251 (MQ=255)
                                                                                                                                                                                                                                       gggcttcgttcattccttaTGTGTCGCCAGTATTCCGCCAGAAACGGGGATTAATACTCTTTGCCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACttttt          <  2:506318‑M2/231‑1 (MQ=255)
                                                                                                                                                                                                                                             cgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGtt                                                                              <  1:331179‑M2/163‑1 (MQ=255)
                                                                                                                                                                                                                                             cgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGtt                                                                              >  2:331179‑M2/14‑176 (MQ=255)
                                                                                                                                                                                                                                             cgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTAtt    <  2:105066‑M2/237‑1 (MQ=255)
                                                                                                                                                                                                                                              gttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCCGTTGAAGATCACCCACACACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTc  >  2:644172‑M2/13‑251 (MQ=255)
                                                                                                                                                                                                                                              gttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTc  <  2:281404‑M2/239‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                              
TGCCTGCGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTC  >  NC_000913/4599958‑4600445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.