| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,173,363 | 0 | C | . | 74.4% | 82.4 / 38.1 | 39 | intergenic (‑490/+919) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| Reads supporting (aligned to +/- strand): ref base C (2/8); new base . (21/8); total (23/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.35e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTC > NC_000913/2173137‑2173612 | ttGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCg > 1:397812/1‑251 (MQ=255) ggggTGTGCAAACCAATTTTTTGCGTCGCGATCCACAGGGGGATGCTAAAAATGATG‑CACCCCAAATTTAGGTG‑CCGGCACAGTTTTCCACGACGCCCGGCGCCCGCAATCGCCACGAAGAAGCCTAGGTTGGCATGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAACCAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTGGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCgg < 1:259516/250‑1 (MQ=255) gtgCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGCTCa > 1:399443/1‑250 (MQ=255) aaaCCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGcc > 2:142547/1‑251 (MQ=255) gTCGCGATCCACAGGGTGCTGATCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACAACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTg > 2:31966/1‑251 (MQ=255) gTCGCGATCCACAGGGTGATGCTCATGATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATA‑‑ACACCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTg > 2:174392/1‑251 (MQ=255) gcgATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAcc > 1:278926/1‑251 (MQ=255) gATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgc > 2:167286/1‑251 (MQ=255) ctCCACAGGGTAATGCTCATAATGATGCCCCCCGAGATTCATGTG‑A‑GGAACAGATTTCCACGATGCACGGCGCCCGCCATCGCCACGCAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACACGGCACACACACAGCAATTAAAATGG‑TGAGTGGGA‑TAAACAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGGCCCAGCAGCCACGCCGGATCAAGGCCACTCAGGAACTCCTGAccccc > 2:31225/2‑248 (MQ=255) gTGATGCTCATAATGACGACACCCGAGATCAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGACGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGc > 1:156950/1‑251 (MQ=255) aTGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTg > 1:137024/1‑251 (MQ=255) tCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACACACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGACTGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACAGCCGAACTTCGACTgaca > 2:299786/1‑247 (MQ=255) cATAATGATGACACCCGAAATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaa < 1:333679/249‑1 (MQ=255) aaaaaTGAGGACCCCCGAGATAAAGGTG‑C‑GAAACAAATTTCACCGAGCCACGGCGCCCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCAAAACGGCAGCCCCTGATTACCCGGCACACAACCAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAc < 1:125579/248‑1 (MQ=255) atgatgACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACt > 2:183044/1‑251 (MQ=255) gatgaCACCCG‑GAATAAGGGGGC‑GGAACAGATTCCCACGAGGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCCCCTGATTCCCCGCCACACAAACAGCAATAAAAATGG‑TGAGTGGGA‑TAAAAAG‑CAGGCTGTCCTATACCACC‑‑GCCGTAGGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTAc < 1:48987/251‑1 (MQ=255) atgccacCCGAGATGAAGGGG‑C‑GGAACAGATTCCCCCGATGCACGGCGACCGCCATCGCCACGAAAAAGCCGATGGTGGCAAGATCGCAAAACGGCAGCACCTGATTCCCCGGCCCACAAACAGCAATAAAAATGG‑TGGGTGGGA‑AAAAAAG‑CAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACg < 2:170327/247‑1 (MQ=255) atgaCACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACg > 2:139866/1‑251 (MQ=255) aTTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCCTCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGc > 1:439525/1‑251 (MQ=255) tAAGGGG‑C‑GAAACATATTTCCACGTGGCACGCCAACCGGCAGCCCCACAAGGAAGCGAATGGTGGCAAGATCGCCAAACGGCAGCATGGGTTTCCCTGTCTCACAATCAGCAAT‑AAAATGGGTGAGGGGTA‑TAAAAAT‑CAGGCTTGC‑TAAACC‑CACCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCg < 1:185011/250‑1 (MQ=255) ttCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccatcc > 1:205596/1‑251 (MQ=255) ccACAATGCACGGCGACCGCCACCGCCACGAAGAAGCCGTTGGTGGCAAGATCGCCAAACGGCAGCACCTGATTCCCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCAATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccatccat < 1:51636/251‑1 (MQ=255) cACGAGGCACGGCGACCGCCACCGCCACGAAGAAGCCGAGGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTGGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatg < 1:183044/251‑1 (MQ=255) cgaggcagggCGCCCGCCATCGCCACAAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCGGCCCTTGTTTTCCCGGCACAAAAACAGCAATTAAAATGG‑GGAGGGGGA‑AAAAAAT‑CAGGCTTGCCAATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAGCTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatgat < 1:362167/243‑1 (MQ=255) cGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGCTCGCCAAACGGCAGCACCTGCTTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGttt > 2:271506/1‑250 (MQ=255) aCCGCCATCGCCACGAAGAAGCCGCTGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCAAACCAACAGAAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGATAACACATCCATGATGGGTTTAATCAc > 2:283212/1‑251 (MQ=255) cATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTg > 1:89777/1‑251 (MQ=255) aagCCGATGGTGGCAAGATCGCCAAACGGCAGCCCCGGATTCCCGGGCCCACAAACAGAAATAAAAATGG‑GGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATAC‑‑CGCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGTTTTAATCACCCGTGGCATTAGCAGCAt < 1:391415/251‑1 (MQ=255) cccaaaaCGCCAGCACTTGATTACCCGGCACAAAAACAGCATTTAAAAGGG‑TGAGTGGAA‑AAAAAAC‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTAcc < 1:370519/247‑1 (MQ=255) aaaacggcgaccccTGATTCCCCGCCACAAAAACAGCAATAAAAAGGG‑TGAGTGGAA‑TAAAAAT‑CAGGCTTGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAATCCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc < 1:283212/239‑1 (MQ=255) acgggCAGCACCTGATTACCCGGCACACAAAAAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CGGGCTTGCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAg < 1:324070/248‑1 (MQ=255) aaCGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc > 2:69152/1‑249 (MQ=255) tccccGGCCCACAACCAGCAAATAAAAGGG‑TGAGTGGG‑‑TAAAAATACAGGCT‑GACCATTCC‑CCCCGCCCTATGGCCCAGCATCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATTATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCttt < 1:256649/248‑1 (MQ=255) tACCCGGCACAAAACCAACATTTAAAATGG‑TG‑GTGGGAATAAAATT‑CAGGCTTCCCAATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACGCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCttt < 1:15216/250‑1 (MQ=255) cacaAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTa > 1:90418/1‑250 (MQ=255) aaaCAGAAATAAAAATGG‑TGAGTGGAA‑TAAAAAT‑CAGGCTTGCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATGCACCTTTGACATCGTAAccc < 1:142547/251‑1 (MQ=255) aTGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGttt > 1:150566/1‑199 (MQ=255) ggA‑TAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACAt > 1:18122/1‑219 (MQ=255) aaaaaacacggccttgcatctccacccGCGGTATGCCCCAGCAGCACCGCCGGATCAAGGCCAAGCAGGAACCCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCag < 2:219069/227‑2 (MQ=255) ggcttcccgatcccaccgccgTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAAccc < 1:268088/236‑1 (MQ=255) gCCGATACCACC‑‑GCCGTATGTACCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACggg > 1:147168/1‑250 (MQ=255) gccaagcccaccgccgTATGTCCCAGCAGCACCGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGt < 1:167286/241‑1 (MQ=255) cacaaccccccGCCTGATGTCCCACCAGCACCGCCGGATCAAGGCCACTCAGGAACCCCGAACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATGAGCAGCAGCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTTACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAATCCCACGGTg < 2:205596/244‑1 (MQ=255) accgccgTATGTCCCAGCAGCAACGCAGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTc > 1:392417/2‑251 (MQ=255) | TTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTG‑C‑GGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGG‑TGAGTGGGA‑TAAAAAT‑CAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTC > NC_000913/2173137‑2173612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |