| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,967,282 | 0 | T | C | 26.0% | 79.2 / 10.6 | 51 | G52G (GGA→GGG) | cheY | chemotaxis protein CheY |
| Reads supporting (aligned to +/- strand): ref base T (24/13); new base C (0/13); total (24/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.63e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATAGTCGCATCCTCACATGCCCAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAATTTTTGCCAACATTTGCTGGCTT > NC_000913/1967036‑1967503 | atAGTCGCATCCTCACATGCCCAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCAt > 1:345051/1‑251 (MQ=255) ccTCACATGCCCAGTTTCTCCAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑gcctgc > 1:91873/1‑251 (MQ=255) tCACATGCCCAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAAAACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑gcctgcct > 1:307919/1‑251 (MQ=255) cccAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAACGTCGCGGCGGTAAATGGCTTCAACACATAGACACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CCCCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACtt > 1:306145/1‑251 (MQ=255) ccAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACtt > 1:411191/1‑250 (MQ=255) cAGTTTCTAAAAGATTTGTTTGAGTTTTTCCCCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACGGGCCCCCGC‑TTGCGCCGCAGCAATGATGTCCTCTTTCTTCGCTTCTGCAGT‑CACCATAACCACTGGCAATCCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGCCATGTTCCAGTCGGAGATAACAAATCCAGAACC‑GCCGGCCTGCAACTTAt < 1:361394/251‑1 (MQ=255) tttCTCAAAGATTCTCTTGCGTTTTTACTCCAGCGTCGCGGCGGTCAATGCCTTAACCAAATAGCCACTGGACCCCGCCTTG‑ACCGCCGCAATGTCGTTCTCTTTCTTCGCGTCTGCAGT‑CAACATTCACACTGGCAATGCCCACATCTCGCCCTCCGCACGAATTGTTTTCAGCAATTCCAGGCCCTCCATAATCGGCATGTTCCCGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTCTTg > 2:404905/1‑250 (MQ=255) aaaGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGGGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAAGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCATCAACTTATTGAGAGCgg > 1:160576/1‑250 (MQ=255) aTTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGAc > 1:374234/1‑251 (MQ=255) ttttttgAGTTTTCCCCCCCGCGCCGCGGCGGTAAAGGGCTACCCCACATAGCCCCGGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTCCGCTTCTGCAGT‑CCCCATTAACCCTGGCAATGCCGACATCGCGCCACCCCCACAATTTGTTTTCAGCAATCCCAGGCCATCCATATGGGGCATGTTCCAGTCGGAGATAACAAATCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACg < 2:377686/246‑1 (MQ=255) ttttCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAACCACTGGCCCCCGC‑TTGCGCCGCATCAATGATGTTCTCTTTCTTCGCTTCTGCAGA‑CACCATTCACACTGGCACTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCCATTCCAGGCCATCCATATTGGGCATGTTCCAGTAGGAGATAACACATCCATAACC‑GCCTGCCTGCCACTTATTGCGAGCGTCGACGcccacctccgc > 1:32235/1‑242 (MQ=255) cctccAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTcc > 2:331494/1‑251 (MQ=255) aGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCCTCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCCCTTCCTCacc > 2:4922/1‑249 (MQ=255) gcggcgGTAAAGGGCTTCCCCCAATAGCCCCTGCCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACGGGAAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattatt < 1:29163/251‑1 (MQ=255) gcgatAAATGCCTTCACCACATAGCCTCTTGCCACAGA‑TTTCCCCGCAGCAAGTATGTTCTTTTTCTTCGCTTCCGCAGT‑CACCATTAACACGGCCAATCCCCACACCGCGCAATCCGCACGAATTGTTTTCAGCAATACCAGGCAATCCACATTGGGCATGTTCAAGTCGGAGTTACCAAATCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCGCAACATAATTGaa < 1:88829/247‑1 (MQ=255) aaagggCTTCACCACATAGCCCCTGGCCCCCGC‑TTGCCCCGCAGCAATGATGTCCTCTTTCTCCGCTCCTGCAGT‑CCCCATTAACCCTGGCAATCCCGACATCGCCCCATCCGCACGAATTGTTTTCAGCAATCCCAGCCCATCCATATTGGGCATGTTCCAGTCGGAGAAAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCa < 1:265513/247‑1 (MQ=255) aTGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGc > 1:208851/1‑251 (MQ=255) tccccacATAGCCACGGCCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CCCCATTAACACTGGCAATGCCGCCATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCAAGCCCCCCCATATTGGGCATGTTCCATTCGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATGATTGAATCCCAGCTCtt < 1:373735/246‑1 (MQ=255) aTAGCCACTGGCCCCCGC‑TTGCGCCGCACCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCACCCGCACGAATTTTGTTCAGCAATTCCAGGCCATCCATATTGGGCATGTCCCAGCGGGAAAAAACAAATCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGt < 1:181650/251‑1 (MQ=255) gaGCCCCTGCCCCCCCC‑GTGCGCCGCAGCAATGATTTTCCCTTTCTTCGCTTCTGCATT‑CCCCATTACCACTGGCAATGCCGCCATCGGGCCGGCCGCACAAATGGTTTTCGGAAATTCCAGGCCACCCATATGGGGCAGGTTCCGGCGGGAGAAAACAAACCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTGTCAGCAGGtt < 2:363931/250‑1 (MQ=255) cccACTGGCCCCCGC‑TGGCGCGGCAGCAATGATGTTCTCTTTCTTCGCTTCGGCAGT‑CACCATGACCACTGGCAATGCCGACATCGCCCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGAAAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTAc < 1:186894/250‑1 (MQ=255) aCTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCTGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGc > 2:134705/1‑250 (MQ=255) cggccccccGC‑TTACGCCCAAGCAATGATTTTCTCTTTCTTCGCTTTCGCAGT‑CCCCATTAACACGGGCAATGCCAACATCGCGCCACCCGCACGAATTTTTTTCAGCAATTCCAGGCCACCCATATGGGGCATGTCCCAGTCGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATGATTGAATCCCAGCTCTTTCAGCAGGTTACGCAc < 2:80666/247‑1 (MQ=255) gCCCCCGC‑TTGCGCCGCAGCAATGATGATCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTAt > 2:256395/1‑251 (MQ=255) cGC‑TTGCGCCGCAGCATTGATGTCCCCTTTCTTCGCTTCTACAGT‑CCCCATTAACCCGGGCAACGCCGACATCGCCCCACCCGCACAAATTGTTTGCACCAATGCCAGGCCATCCATATTGGGCATTTTCCAGCGGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCATGTTACGCACTATGCGTc < 1:136702/251‑1 (MQ=255) gcagcaATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtggtgg > 1:281264/1‑250 (MQ=255) agcaATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACCCGGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGaaa < 1:120222/251‑1 (MQ=255) atgatgTTCTCTTTCTTCGCCTCTCCTGT‑CACCAATAACACTGGAAATGCCGACATCGCGCCATCCCCAAGAATTGTTTTCAGCAATCCCAGGCCATCCATATTGGGCATGTCCCAGTCGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTc < 2:99475/251‑1 (MQ=255) atgTTCTCTTCCTCCGCTTCTGCATT‑CACCATTAACACGGGCAATGCCGCCACCGCGCCATCCGCACGAATTGTTTGCAGCAATCCCAGGCCATCCATATGGGGCATGTTCCAGCCGGAGAAAACAAATCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGGCGCATGGTGGAAAAGTCATc < 1:151636/251‑1 (MQ=255) cctctTTCTTCGCTTCTG‑AGTTCACCATTACCCCTGCCAAGCCCGACACCGCCCCATCCGCCCGAATTGTTTTCAACAATTCCAGGCCATCCATATTGGGCAGTTTCCAGTCGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcac < 2:407590/249‑1 (MQ=255) ttcttcGCTTCTGCAGT‑CACCATTAACCCGGTCAATGCGGACATCGCGCCTTCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGGCGGAGATAACAAATCCAGAACC‑GCCTGCCTGCAACGTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTGCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAAc < 1:434683/248‑1 (MQ=255) ttctccgcttctccctt‑CACCATTAACACGGGAAAAGCCGACATCGCCCCATCCGCACGAATTGTTTCCATCAATTCCAGGCCATCCATTTGGGGCATGTTCCAGTCGGAGATACCAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCa < 2:160576/234‑1 (MQ=255) tcGCTTCTGCATT‑CACCATTAACACTGGCAATGCTGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAACCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaa < 1:134705/248‑1 (MQ=255) tcGCTTCTGCAGT‑CCCCATAAACCCGGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGAAATTCCAGCCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaa < 1:434110/248‑1 (MQ=255) tcGCTTCTGCAGT‑CACCATTAACACTGCCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCTTTTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaaaa < 1:331494/249‑1 (MQ=255) gcagccacaattaaaccTGGCAAAGCCGAAATCGCGCCATCCGCCCGAATTGTTTTCAGCAATTCCGGCCCCACCATATGGGGCATGTTCCAGTGGGAGATAACAAATCAATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTc < 1:251254/235‑1 (MQ=255) gT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCttt > 2:69592/1‑251 (MQ=255) cacTGGCAATGCCGCCACCGCTCCATCCGCACGAATTGTTGGCAGAAATTCCAGGCTATCCATTTTGGGCATGTTCCAGTCGGAGATAACAAATCCATATCC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTTGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAttt < 1:409321/251‑1 (MQ=255) cgccgccATCGCCCCACCCGCACGATTTGTTTCAAACAATCCCAGCCCACCCATATTGGGCATTTTCCAGTCGGAGATAACAAACCAATACCC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCt < 1:4922/250‑1 (MQ=255) gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCTCCATTTCACACTCCTgctt > 2:111279/1‑248 (MQ=255) aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAACAATTTAAGTTCTTTATCCGCCCTTTCACACTCCTGATTTa > 2:299245/1‑250 (MQ=255) gcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACg > 1:356711/1‑251 (MQ=255) aTTGTTTCCAGAAATCCCGGCCCACCCATATTGGGCATGTTCCAGTCGGAGAAAACAAACCCAAACCC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCg < 1:69592/251‑1 (MQ=255) tttttttcagaaatctcgggCCATCCATTTTGGGCATTTTCCTGCCGGAAAAAAAAAATGCAAAACC‑TCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGTTTCCTCAACAGTATTGAAGCCCAGCGCTGTCAGCAGGTTACTCACTATGCGTCGCATGGTGGAAAAGTCATCCACACCCAAAAATTTAAGTTCTTTATCCGCCATTTCACACGCCTGATTTAAATACGTATCGCCTGTCCg < 1:386792/232‑1 (MQ=255) cAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAAt > 1:139474/1‑251 (MQ=255) cAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcac > 2:276696/1‑174 (MQ=255) cAATCCCAGGCCACCCATATGGGGCATGTTCCAGTCGGAGATAACAAACCCAAAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcac < 1:276696/174‑1 (MQ=255) ggCCATCCATATTGGGAATGTTCCCGTCGGAGATAACAAATACATAACC‑GCCTGACTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACCCTCCTGCTTTAAATACGTATCGCCTGTCCGGCACTAATTTTTGCCAAc > 2:206299/1‑250 (MQ=255) ccatATTGGGCATGTTCCAGTCGGAGATAACACATCCACAACC‑GCCTGCCTGCAACTTATTGAGAGCGCCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAATTTTTGCCAACATTTGCt > 2:204789/1‑251 (MQ=255) atgtgggatttttcccAGTCGGAGA‑AAAAAAACCAAAACCCGCCTGCCTGCAACTTATTGAGGGCGCCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAATTTGTGCCAACATTTGCTgg < 2:289227/237‑1 (MQ=255) ttGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAATTTTTGCCAACATTTGCTGGCtt > 2:99005/1‑251 (MQ=255) | ATAGTCGCATCCTCACATGCCCAGTTTCTCAAAGATTTTGTTGAGTTTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGC‑TTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGT‑CACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACC‑GCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCATTTCACACTCCTGATTTAAATACGTATCGCCTGTCCGGCACTAATTTTTGCCAACATTTGCTGGCTT > NC_000913/1967036‑1967503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |