| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 375,621 | 0 | A | G | 22.0% | 135.8 / 10.5 | 59 | I55V (ATA→GTA) | mhpT | 3‑hydroxyphenylpropionate/3‑ hydroxycinnamate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base A (16/30); new base G (13/0); total (29/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGCAGTCATTAAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGTT > NC_000913/375378‑375864 | ggCAGTCATTAAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGGCTCGCCCCGGCTTTTGCCCTCGGTAAAAAGCAAATGGGGTGGGTAttttg > 1:167002/1‑249 (MQ=255) aaaTAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAAt < 1:283280/250‑1 (MQ=255) aaTAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCTATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGAGCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATAc < 2:282497/251‑1 (MQ=255) aaTAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGCTTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGGATCGCCCAGGCGTTCGGCCTCCAGAAAATGAAAATGGGGTGGGTATTTAGTGCCGGGATa > 1:164603/1‑250 (MQ=255) aaTAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATAc < 1:111907/251‑1 (MQ=255) aTAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATTGGCTGTATATTTAGCGCCGGAATACt < 1:169166/251‑1 (MQ=255) aGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGAACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACAATAGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGGCTAGCCCAGGATTTCGCACACGGTAAAATGCAAATAGGGTGGGTAGTTTGCGCCAGGATACTCg > 1:197562/1‑251 (MQ=255) aCGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCGTCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCGGGGTATTTAGCGCCGGAATACTCGGTTTGCTaac > 1:319788/1‑249 (MQ=255) ggCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGgc < 1:409196/251‑1 (MQ=255) tGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCATCCCCCAGGCTTTCCCCCTCGATAAAATGCAAATGGGCTGGGGATTTTGCGCCGGGATACTCGGTTTGTTTCCCGGcgcg > 1:158383/1‑251 (MQ=255) ggCAATGTCTCAGTCGCGCTTCACCTGCACCCGCAACGCGGTTCATCTTATGTCGACTCCTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCATCCCCCCGGCCTTCGCACCCCATAAAATGCAAATGGGGGGGATTTTTTTGGCCGGGCTACTCGGTGTGCTACCCGgcggcg > 2:52498/1‑248 (MQ=255) gATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCCGGCTTTCGCACTCGGTAAAATGCAAATGGGGTGGGTATTTAGCGCCGGGATAATCGGGTTGCTACCCGGCGCG‑TTGGTTGGCGGGATggtg > 1:31682/1‑248 (MQ=255) cagCACGCGCAACGAGGTTCATCTTATGCCGACGCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTGCCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑Acc < 2:9110/249‑1 (MQ=255) gCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCTCACTCGATAAAATGCAAAAGGGGTGGGTATTTAGTGCCGGGATACTCGGGTTGCTACCCCGCGCG‑GTGGGTGGCGGGATGCTGGCGG‑ACCgg > 1:370667/1‑250 (MQ=255) gCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCg < 1:347474/250‑1 (MQ=255) tATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGa < 1:28643/178‑1 (MQ=255) aTGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGCCCAACGGGCTTTGTTTTTTAGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGGCTCGCCCAGGCTTTCTCACTCCATACAAACCAAATGGGCTGGGTATTTAAAGCCGGAACACCCTGGTTGATACCCCGCCCGGTTGTTTGG‑GGCATGATGGCGG‑ACCGCTATGGGCGCCAGCGCCttttttt > 1:213958/1‑248 (MQ=255) aTGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCTCAAGCGCATTTTGa < 1:117295/250‑1 (MQ=255) gTACCCCTTCATCATCGTCATCCCGCCGGATGCTGACCATCGGGCTTTGTGTTTTGGTCGCTCTGATGGAAGGTCTGGATCGTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTGCCCGGCGCG‑TTTGTTGGCGGAAGTCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGAGTGGCTC‑AGtt < 2:417859/251‑1 (MQ=255) ttaggggctataatgtgatccGCCTGATGCTGACCATCTGGCTTTGTTTTTTGGTCGCTCTTATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGTCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGGCGCAAGCGCAGTTTGATTGGCGC‑AGTTgc < 2:400906/231‑1 (MQ=255) cTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCCTTTGCACTCGATAAAATGCAAATGGGGTGGGTATTTTGCGCCGGGATACACGGTTTGCTACCCCGCGCG‑TTGGGTGGCGGGATGGTGGCGG‑GCCGTTTTTGGCGCCAGCGCCTTTTTATTTGCCC‑CGGTGCGCTgttt‑ggtttt > 1:11523/1‑250 (MQ=255) cccGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATAttt < 2:52714/137‑1 (MQ=255) cccGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCATCGCCCCGGGTTTTCCACTCGATAAAATGCCAATGGGCTGGGTAttt > 1:52714/1‑137 (MQ=255) cATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGGGGCATCGCCCAGGCTTTCGCACTCGATAAAAAGCAAATGGGCTGGGTATTTTGCGCCGGGATACTCGGGTTGCTACCCCGCGCG‑TTGGGTGGCGGGAAGCCGGCGG‑GCCGGTATTGGCGCCAGCGCCTTTTTTTTGGCTCCGGTTG‑GCTGGTT‑GGGTTGTTTTCACTGGCAACGGCggctt > 1:363770/1‑247 (MQ=255) tCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGGAACGGCCCGGCTTTCGCAATCGATAAAAATCAAATGGGCTGGGTATTTTGCGCCCGGATACTCGGTTTTCTACCCCGCGTG‑GTGGTTGGCGGGATGCTGGCGG‑ACCGGTATTGTTGCCAGAGCATTTTGGTTGGCTC‑AGGTG‑GCCGTTTTGGTTTTTTCTCACTGGGTACGGCGATTggc > 1:372750/1‑249 (MQ=255) ttGTTTTTTGGTCGCTCTGATGGAAGGTCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGa < 2:241545/249‑1 (MQ=255) ggTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCAc < 1:113264/251‑1 (MQ=255) ggTCGCTCGGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCAc < 2:312365/251‑1 (MQ=255) gCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGGATCGCCCCGGCTTTCGCCCCCGATAAAATGCAAATGGGCTGGGTTTTTAGCGCCGGGAAACTCGGTTTGCTACCCGGCGCGGTTGGT‑GGGGGGATGCTGGGGGGACGGTTTTGG‑CGGCAGGGCATTTTGTTTGGGTC‑CGGTGGGCCGTTT‑TGTTTGTTTTTCCTGGCAACGGCGATTGCCTgggggtttgatcgggaggg > 2:57793/1‑235 (MQ=255) gCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGAttt < 1:57793/239‑1 (MQ=255) gATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATGTCCCCTCACTGGTCt < 1:345036/248‑1 (MQ=255) gATGGAAGGGCTGGATCTTCAGGCGGCGGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATAGTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGAGTGGCTC‑AGTTGCGCTGTTT‑GGTGTGTGCTCACTGGCAGCTGCGATTGCCTTGGATTTCCCCTCACTGGTCTTTg < 2:44701/251‑1 (MQ=255) ggAAGGGCTGGATCTGCAGGCGGCGGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGTTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTTGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTgcgc < 1:312981/251‑1 (MQ=255) ggATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCtgat < 1:358334/249‑1 (MQ=255) tCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGAc < 2:167002/246‑1 (MQ=255) cAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGgtgt < 2:234205/251‑1 (MQ=255) ggcgggCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTGAGCGCCGTAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTAGGGTCGCAAGCGCAGTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACAGGTCTGTGCGCGGCTTAGGACCGGTGGCGGGc < 2:213958/247‑1 (MQ=255) ggCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTg < 1:289899/249‑1 (MQ=255) ggCATTGCGGCGGGGGGCATCGCCCAGGCCTTTGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGGG‑TTGGGTGGCGGGATGCTGGCGG‑GCCGTTTTGGTCGCCAGCGCATTTTGATTGGCTC‑CGTTGCGCAGTTT‑GGGTTGTTCTTCCTGGCAAAGGGGGTTGCCTGGGGTTTTCCCCCCCTGGGCTTTGGGCGGCTGGTGACCGGTGTCGGGGTggg > 1:415421/1‑251 (MQ=255) gcggGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGtt > 1:318476/1‑251 (MQ=255) cggGTGGAATCGCCCAGGCTTTCGCACTCGATAAAATGCAAAGGGGCTGGATATTGAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTg < 2:274468/251‑1 (MQ=255) tGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGggcggc > 1:437162/1‑243 (MQ=255) tGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGggcggc < 2:437162/243‑1 (MQ=255) cATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGCATc > 2:380009/1‑251 (MQ=255) cGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGGTTGTTCTCACTGGCAACGGCGATTTCCTTGGATTTCCCCTCACTGGTCTTTGCGCTGCGGATGACCGGTGTCGGGCTGGGGGCGGCGGTGCCGAATCtt < 1:297275/250‑1 (MQ=255) ggCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCGGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑CCCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGAGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCCGGGGGCGGCGTTGCCGAATCtagatcggg > 1:43534/1‑243 (MQ=255) ggCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGccc > 1:78174/1‑251 (MQ=255) ggCTTTCGCACTCGATAAAATGCAAATGGGCGGGATATTTAGCGCCGGAATACTCGGATTGCTACCCGGCGCG‑TTGGTTGGCGTAATTCGGGCGG‑ACCTTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGGTTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTTGGGGCGCCGTTGCCGAATCt < 2:43534/243‑1 (MQ=255) gCTTTCGCACTCGATAAAATGCAAATGGGATGGATATTTAGCGCCGGAACACTAGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCCTTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCt > 1:430235/1‑251 (MQ=255) aaaTGCCACTGGGCTGGATCTTTCGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGACTGCTGGCGG‑ACCGTTATGGTCGCAAGAGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCCACGGCGCTTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGAGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAgacggg > 2:284820/1‑246 (MQ=255) aaTGCAAATGGGCTGGATATTTCGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGCTTGGCGGAATGCTGGCGG‑ACCGCTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTACTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCAATGGTCTTTGCGCGGCTGCTGACCGGGGTCGGGCTGGGGGCGGCGTCGCCTAATCTTATCGACCTGACGTATGAAGCCGCgg > 2:415411/1‑251 (MQ=255) aaTGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCgg > 1:40049/1‑251 (MQ=255) aTGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATGGCCTGGGATTTCCCCTCACTGGTCGTTGCGCGGCTGATGGCCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCggg < 1:273450/251‑1 (MQ=255) caaTGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTccc > 2:362527/2‑250 (MQ=255) aaaTGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTccc > 2:20751/1‑250 (MQ=255) aaTGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTAGCGCCCTGACGTCTGAAGCCGCggggcccc > 2:18128/1‑246 (MQ=255) gggCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGtt > 1:429557/1‑251 (MQ=255) gggCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGtt < 1:20751/251‑1 (MQ=255) gggCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACACGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGACGCAAGCGACTTTTGCTTGGATC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTACACGtt > 1:284255/1‑251 (MQ=255) | GGCAGTCATTAAATAGTTCTGATTACGCGGCTGGCAATGTATCAGTCGCGATTCACCTGCACTCGCAACGAGGTTCATCTTATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCG‑TTGGTTGGCGGAATGCTGGCGG‑ACCGTTATGGTCGCAAGCGCATTTTGATTGGCTC‑AGTTGCGCTGTTT‑GGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGTT > NC_000913/375378‑375864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |