| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,707,441 | 0 | C | A | 26.3% | 110.2 / 10.4 | 58 | A121S (GCG→TCG) | rseC | protein RseC |
| Reads supporting (aligned to +/- strand): ref base C (34/8); new base A (0/15); total (35/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTCTGTATTAATAGAAACGCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGTTTGCGGGCCAAGTTTATTTAACACGCGG > NC_000913/2707193‑2707691 | gTCTGTATTAATAGAAACGCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCa > 1:300142/1‑250 (MQ=255) aaTAGAAACGCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAAc < 1:79705/250‑1 (MQ=255) aGAAACTCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCCGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGCTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGACAGGCTGCCATTCTGCCCGGGCAGCAAACTTACG‑CCAGAAAGCC‑CGCGGAATCAGGAACCCGc > 2:372804/1‑251 (MQ=255) aaCGCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCa > 1:441916/1‑250 (MQ=255) cactacaACATGAAGGGGAGAAAATGTTCATACCGTATGGATGTTGGTATC‑GGAAACCCT‑CCTCGCTTTTTTAAGGCAAAATGAAAAAAAGCCA‑GAGAAAT‑CACTGGCCCGCGTCTTCAGAAG‑ATGTTTCAAACCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGAGGATCGGTTGCCATTCGCCCCGGGAAGCAACCTTACG‑GGAGTA‑GCCGCGCGAAATCAGGACCCCGCCAATACCACCGAGGATc < 2:441916/251‑1 (MQ=255) caTTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGcaccac > 1:483259/1‑250 (MQ=255) aTTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACAt > 2:174494/1‑251 (MQ=255) gAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAAt > 1:19249/1‑251 (MQ=255) ggAAATGTTCATGCCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCg > 1:391918/1‑250 (MQ=255) aaaTGTCCATACCGTATGGATTTTGGTATCTGGAAACG‑T‑CCTCGCTTTTGTTATGAAAAATGCAACAAAGCAA‑GTGAAAT‑CACTGGCTCGCTTCTTCCGAAT‑ATTTTACAAATCGCACAGGGCCAGGCGGCAAGGCCACGCTTAAGATGTTCGGTTGCCATTCTCCCCGGGCAGCAAACTGCCG‑GGAGGA‑CCCGCGCGAAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACg < 1:175093/251‑1 (MQ=255) aTACCGTATGGATTGTGGTATCTGAAACCC‑T‑CCTCGCTTTTTTTAGGAAAAAAGCAACAAGGCCA‑GTAAAAC‑CCCTGTCCCGCTTCCTCCGAAG‑TTTTTTCAAAGCGCACAGGCCCCGGGGGCAGTGCCACGCTTAGGAGGTTGGGTCGCCATCCGGCCCGGGCAGCAACCTTCCG‑CGAGTA‑CCCGCGCCCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGc < 1:213498/251‑1 (MQ=255) ccGTATGGATTGTGTTATCTG‑AAACC‑TGCCTCGATTTTTTTAGGCAAAATCAAACAAGGCGG‑GGAAAAT‑CACGGGCTCGGGTCT‑CCGAAGGTTGTTCAAAATCGCAAAAGGCCGGGCGGCAATGCCCCGCTAAGGATGACCGGTGTCCTTTCTGCCCGGGCAGCAACTTTGCG‑CGTGGG‑GCCGCGCGAAACCAGAACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCaaa < 1:248163/251‑1 (MQ=255) tATGGGTTGTGTTTTCTGAAAACG‑T‑CTTCGCATTTTTTATGAAAAAGGCAACAAAGC‑A‑GGGGAATACCCGGGCTCGCGTCTCCAAAAG‑ATGTTTAAAACCGCAAAAGGCCGGGCGGAAATCCCACGTTTAAGAGGACCGGTGGCAATTCTGCCGGGACAAAAAACTTACG‑CGGGGA‑GCCGCGCGAAAGCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAaga < 2:421418/250‑1 (MQ=255) tATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAag > 1:350135/1‑249 (MQ=255) gaTGGATTGTGGTATCTGGAACCG‑T‑CCTCGCATTTGTTATGAAAAATGCAAAAAAGCCA‑GTGAAAC‑CACTGGCTCGCGTCTCCCGAAG‑ATGTTTCAAATCGCACAAGGCCGGGCGGCAATGCCCCGCTTAAGATGATCGGTTCCCATTCTGCCCGGGCAGAAAACTTCCG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAagag < 1:174494/250‑1 (MQ=255) agggtgtgtgTTATCTGGAAGCG‑C‑CCTGGCATTTGATAAGCAAACTGCAACAAATCCA‑GTGAAAT‑CACTGCCTCGTGTCCTCCGAGT‑ATTTTTAAATTCGCACAGGGCCGGGCGCAAATGCCACCCTTAAGAGGTCCGGTTGCCTTTCCCCCCGGCCAGCAAACTCACG‑TAAGTA‑GCCCCGCAAAATCAGCACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAagag < 2:38523/244‑1 (MQ=255) aTGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAAt > 1:482220/1‑202 (MQ=255) ggTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAAt > 2:52059/1‑251 (MQ=255) gTATCTGGAAACG‑T‑CCTCGTATTTGTTATGCAAAAGGAAAAAAAGCCA‑GTAAACT‑CTCTGGCTCGCGTCTACCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGAAATCCCCCGCTAAGGATGCGCGGTTGCTGTTCTGCCGGGGCACCAAGCT‑ACGGCTTGGA‑GCCGCGCGCAATCAGGAACCCGCCAATTCCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATa < 1:52059/251‑1 (MQ=255) tatctgaaacctcccTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑TTAAAAT‑CACTGGCTCGCGTCTTCAGAAG‑ATGTTCCAAATCCCACAGGGCCAGCCGGCAATCCCACGCTTAAGATGATCGGTTCCCTTTCTGCCCGGGCAGAAAACTTCCG‑CGAGTA‑GCCGCGCGAAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATa < 1:97902/237‑1 (MQ=255) cTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATagcg > 2:421390/1‑250 (MQ=255) gggaaccgcccccgcttttgtaaggCAAAATGAAAAAAGGCCA‑GTGAAAT‑CGCGGGCCCGCGTCTTCCGAAG‑ATTTTTAAAATCGCACAAGGCCGGGCGCCAAGGCCACGCTTAAGATGTGCGGTTGCCATTCGGCCGGGGAGGAAAACTTACG‑CGAGTA‑GCCGCGCGAAATAAGAACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGTTGAAATagcgaa < 1:393012/227‑1 (MQ=255) g‑T‑CCTCGCATTTGTTATGAAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGACG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATa > 2:478191/1‑250 (MQ=255) g‑T‑CCTCGCATTTGTTAGGCCAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGATTAAGATGATCGGGTGCCATTCTGCCCGGGCAGCAAAATTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATa > 2:51610/1‑250 (MQ=255) cgccctctttttttttATGCAAAATCCAA‑AAAGCCAAGGAAAAT‑CTCTGCCGCGCTTCTTCCGATG‑TTTTTTCAAATCGCACAGGGCAAGGGGACAATCCCCCGCTTAAGATGTTCGTGTCCCATTCTCCCGGGGCAGCAAACTCGCG‑CGAGGA‑GCCGCGCGAAATCAGGACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATa < 2:545467/237‑1 (MQ=255) tGTTATGCAAAATGCAACAAAGCCA‑GTGCAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAACGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGGA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAAAAGCGAAGCGATAAGGCATAATccc > 1:190675/1‑251 (MQ=255) gCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGAAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAgc > 2:150352/1‑251 (MQ=255) aaaaTGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAgcgg > 1:19331/1‑251 (MQ=255) gCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGAc > 1:533618/1‑250 (MQ=255) cgcgTCTTCCAAAT‑TTTTTTAAAATCGCAAAAGCCCGGGCGGCAATGCCACACTAAAGATGACCGGTTGCCATTCGGCCCGGACAGAAACCTTACG‑CGAGTA‑CCCGCGCGCAATAAGAAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCa < 1:189643/251‑1 (MQ=255) gTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGACGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGc > 2:535413/1‑251 (MQ=255) aaG‑ATTTTTCAAACCGCAAAAGGCCGGGCGCAAATCCCACGTTAAAGATGATCGGTTCCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTG‑GCCGCCCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCg < 1:77757/251‑1 (MQ=255) gTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGAt > 2:357457/1‑251 (MQ=255) tttCAAACCGCACAGGGCCAGGCGGCAGTGCCACGTTTAAGGTGGTCGGTTGCCATTCTGCCCGGGCAGCAACCTGACG‑GGAGCA‑GCCGCGCGAAATCAGGACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGAt < 2:483259/250‑1 (MQ=255) ccAAACCGCACAAGGCCGGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATCCGGCCCGGGCAACAAACTGACG‑CGAGTA‑GCCGCGCACAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATccc < 1:421390/250‑1 (MQ=255) aaaTCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATcccc > 1:68058/1‑250 (MQ=255) aaTCGAACAAGGCCAGGCGGCAATGCCACGCTTAAGATGAGCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATACCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATcccaa > 2:390949/1‑248 (MQ=255) aTCGCACAGGGCAGGGCGACAATCCCACTCTTAATATGATCGGTTGCCTTTCCCCCCGGGCAGCAAACTTCCG‑CGAGTA‑CCCGCGCGAAATCAGGACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAAt < 1:162613/251‑1 (MQ=255) aTCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAAt > 2:196213/1‑251 (MQ=255) acaAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCAc > 2:295691/1‑251 (MQ=255) aaGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACtt > 1:119504/1‑251 (MQ=255) gggggcAATGCCCCGCTTAAGAGGATCGGTTGCCATTCGGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCGGCGCGAAATCAGGACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGAt < 1:408998/227‑1 (MQ=255) ggcggcAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAACGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGAt > 2:408998/1‑230 (MQ=255) ccAATGCCACGCTTAAGATGATCGGTTGCCTTTCTGCCCGGGAAGCAAACTTACG‑CGAGTC‑GCCGCGCGAAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGc < 1:535413/250‑1 (MQ=255) aaTGCCACACTTAAGAGGATCGTCTGCCATTCGGCCCGGGCAACAACCTTCCG‑CGAGTG‑GCCCCGCGAAATCAGGACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCGCTTTTTGCCCCGGCAc < 1:93568/251‑1 (MQ=255) ccACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGAAAACTTACG‑CGAGTA‑CCCGCGCGAAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAAc < 1:254820/251‑1 (MQ=255) naCGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAAc > 2:254820/2‑250 (MQ=255) gCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCt > 1:370353/1‑251 (MQ=255) atgatCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATcac > 2:297869/1‑250 (MQ=255) atgatCGGTTGCCATTCTGCCCGGGCAGCAAAATTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATcac > 1:495546/1‑250 (MQ=255) ggatgggTTCCCATTCTGCCCGGGCAGAAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGAACCCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAg < 1:297869/246‑1 (MQ=255) ttGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACg > 2:553266/1‑250 (MQ=255) aTTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAATAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATg > 2:410740/1‑251 (MQ=255) aTTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATg > 1:170085/1‑251 (MQ=255) gCCCGGGAAGAAAACTTACG‑CGAGTA‑GCCGCGCGAAATCAGAAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGt < 1:357457/248‑1 (MQ=255) gggCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTg > 1:441574/1‑251 (MQ=255) cagcaAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGtt > 1:133953/1‑251 (MQ=255) cgcgcgCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGTTTGCGGGCCAAGTTTATTTAac > 2:121289/1‑251 (MQ=255) cAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGTTTGCGGGCCAAGTTTATTTAACACGCgg > 2:315223/1‑251 (MQ=255) cAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGTGTGCGGGCCAAGTTTATTTAACACGCgg > 2:72044/1‑251 (MQ=255) | GTCTGTATTAATAGAAACGCCGCATTCTACACTACAACATTGAGGCGAGGAAATGTTCATACCGTATGGATTGTGGTATCTGGAAACG‑T‑CCTCGCATTTGTTATGCAAAATGCAACAAAGCCA‑GTGAAAT‑CACTGGCTCGCGTCTTCCGAAG‑ATGTTTCAAATCGCACAAGGCCAGGCGGCAATGCCACGCTTAAGATGATCGGTTGCCATTCTGCCCGGGCAGCAAACTTACG‑CGAGTA‑GCCGCGCGCAATCAGGAACCCGCCAATACCACCGAGGATCGCACCACATAATGCTGCGACGTCAGAAGCAAAGAGTAGCTGAAATAGCGAAGCGATAAGGAATAATCCCACCAGCGGCGACATATAAACCAGTAATGCGGAGCTAAGCAGGCTGCCTTCGGCGATCCCCAATTCCACTTTTTGCCCCGGCACTAACGGCTCATCACAGGGTACGACAATGGTATGCGTGGTTTGCGGGCCAAGTTTATTTAACACGCGG > NC_000913/2707193‑2707691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |