| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,261,842 | 0 | T | G | 40.9% | 102.6 / 16.5 | 66 | T12P (ACC→CCC) | prs | ribose‑phosphate diphosphokinase |
| Reads supporting (aligned to +/- strand): ref base T (11/28); new base G (26/1); total (37/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACAGCGGTGATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCATTGAGCCATTC > NC_000913/1261613‑1262091 | aCAGCGGTGATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACAAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGCCATACGTTGGGCTAGATTCGGGGGGGCGGTACCAGC‑aaaaaacct > 1:153183/1‑247 (MQ=255) gCGGTGATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCTCCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCat < 1:120664/251‑1 (MQ=255) cGGTGATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCTATACAGTGTGCGAGTTTCGGGGGGGCGtttcccacaaaaaaattctc > 2:80848/1‑232 (MQ=255) cGGTGATACGACATGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGCACTAAGTTGGGCTTGTTCCGGGGGGGCGTTACCAGC‑CAAAAA‑CTTCat > 2:557963/1‑250 (MQ=255) gATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCa < 1:221742/250‑1 (MQ=255) aTACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATAGCAg < 2:420995/250‑1 (MQ=255) gAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGGGGTACCACC‑AAAAAG‑CTTCCTATCAGGCACGagaaaaa > 2:559063/1‑247 (MQ=255) gAAGCACGACGCAGGGCATCAACCATAACGACTAAGTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAAc < 2:357371/251‑1 (MQ=255) aaGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGGTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAAcc > 1:104907/1‑251 (MQ=255) aGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGGGTACAGGCGGTTGGGAATAAGTTTGGCTGGTTCCGGGGGGGCGTTACCAGA‑CAAAAG‑CTTCCTAACAGGCACGCGAAGAACCACCGG‑CATggg > 2:161232/1‑249 (MQ=255) aTCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGGGCTTGTTCCGGGGGGGGGGTACCAGC‑AAAAAG‑CCTCATATCAGGCACGAGAAGAAACTCAGG‑CCTGGGTCCAt > 2:164530/1‑251 (MQ=255) aaCCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATtgg < 2:481926/251‑1 (MQ=255) aTAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATtggtggg > 1:247424/1‑250 (MQ=255) aaTTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATc < 1:204787/249‑1 (MQ=255) aaTTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCt < 1:122679/250‑1 (MQ=255) tCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGcc < 1:168352/250‑1 (MQ=255) ccATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCg < 2:426949/250‑1 (MQ=255) ccATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCg < 1:164530/250‑1 (MQ=255) ccATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGa < 2:344960/251‑1 (MQ=255) cATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGaa < 1:139254/251‑1 (MQ=255) cATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAAAACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAAACTCAGG‑CATGCGTCCATTGGTGGAAAGAATATGcaga > 2:408449/1‑247 (MQ=255) agtagGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAAG‑CATGCGTCCATTGGTGGAAAAAATCTGCCGCAAAATGTG‑CGGGcccg > 1:201743/1‑249 (MQ=255) gtagGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGTGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAgg < 2:484352/251‑1 (MQ=255) gtagGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGGGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCCTTGGGGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAgg > 1:120795/1‑251 (MQ=255) ggCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGCCATACGGTGTGCTAGTTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAAACTCAGG‑CATGCGTCCATTTGTGGGAAGAATCTggcgggggtatccacttcggcacca > 1:90677/1‑225 (MQ=255) ggACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTcc < 1:468151/250‑1 (MQ=255) aCTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGATGGCAATACGTTGTGTTAGGTCCGGGGGGGCGGTACCAGC‑AAAAAA‑CATCATAATAGGCACGCGAAGAAACTCCGG‑CATGCGGCCCTTGGTGGGAAGAATGTCCCGAAAACTAGG‑CGGGCCAGGCATGATTCTTTTCAgg > 1:138057/1‑251 (MQ=255) gatgatGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTTGCAATACGGTGTGCAAGTTCCCGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATTTCAGGCACGAGAAGAAACTCAGG‑CATGCGGCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑GGGGCCAGGCATGATTCTTTCCAGGCggg > 1:307652/1‑250 (MQ=255) gatgaAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGTTTCCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGGAAAAAACTGCCGAAAAACGTT‑CGGGCCAGGGATGAACCTTTCCAAGCggggt > 1:547156/1‑247 (MQ=255) atatCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTTGTTCCGGGGGGGCGGTACCCGC‑AAAAAG‑ATTCATATCAGGCACGAGAAGAAACTCAGG‑CAGGCGGCCCCTTGTGGCAAGAATCCGCCGAAAAACGTG‑CGGGCCAGGCATCATCCTTTCCAGGCGGGGGATTaa > 2:383552/1‑248 (MQ=255) ccagtaagctgacccATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAagagt < 2:93775/237‑2 (MQ=255) cgTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTTTTAAAGAGCGCGATGCAAc < 2:369732/251‑1 (MQ=255) gTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGGTGTGCTAGTTCCGGGGGGGGGTTACCAAC‑AAAAAG‑CTTCATATCCGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGGGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGAACCTTTCCAGGCGGTGGTTTAAAAAGCGCGATGCAACg > 1:99912/1‑251 (MQ=255) gTACATTTTCATTAATTTGTACGATGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCCAAACGGTGGGGGAAGTCCGGGGGGGCGGTACCAACGAAAAAA‑CT‑CATCTCAGGGACGAGAAGAACCTCAGG‑CATGCGGCCCTTGGTGGAAAAAAACTGCCGAAAAACGTGGCGGGC‑AGGCATGCACCTTTCCCAGCGGTGTATTaaaaggcacggtggca > 2:207924/1‑236 (MQ=255) aTTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGGTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCCCAGG‑CATGCGTCCATTGGGGGAAAAAATCTGCCGAAAAAATTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGGGGCTTTAAAAGCGCGATGCAAccgctg > 2:223665/1‑246 (MQ=255) cATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCCAGTTCCGGGGGGGCGTTACCAGC‑CAAAAG‑CTTCCTATCAGGCACGAGAAGAACCTCCGG‑CATGCGTCCATTTGTGGAAAGAATATGCCGAAAACTGTG‑CGGGGCCCGCAAGATCCTTTCCAGGCGGGGGATTAAAGAGCGCGAGGCAAAGTCTGGAAc > 2:501445/1‑250 (MQ=255) tGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATTCGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGAc < 1:247351/250‑1 (MQ=255) gTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCCAAACGTTGTGCTCGTTCCGGGGGGGCGTTACCCGC‑AAAAAA‑CTTCATCTCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTTTG‑CGGGCCAGGCAAGATCCTTTTCAGGCGGGGGATTAAAGAACGCGATGCAACGTCTGGAACAAGGTGACgg > 1:482479/1‑250 (MQ=255) tACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGGTGGCAAAACGTTGTGCTAGCGCCGGGGGGGGGTTACCAGC‑AAAAAGGCTT‑ATATCAGGCACGGGAAGAACCTCAGG‑CATGCGGCCCTTGGTGGGAAAAAACTGCCGAAAAATGTG‑CGGGCCCGGCATGAACCTTTCCAGGCGGCGTATTAAAGAACGCGAAGCACCCGCTGGAACAAgggtatgtt > 1:54030/1‑244 (MQ=255) aCGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAAGCACGAGAAGAAACTCAGG‑CATGCGTCCATTGGTGGAAAAAAACTGCCGGAAAATGTG‑CGGGCCAGGCACGATCCTTTCCAGGCGGGGTATTTAAAAGCGCGGTGCAACCGCTGGAAAAAgggggcgggt > 2:227958/1‑243 (MQ=255) cGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTTACGTTGt < 2:102286/251‑1 (MQ=255) ttCGCCATCGCTGAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGGCTGGAACAAGGGGACGTTGTCCCCGa > 1:393179/1‑250 (MQ=255) cGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGGTCCGGGGGGGGGGTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAAACTTCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGGATTAAAAAGCGCGATGCAACGTCTGGTACAAAGGGGCGTTGTCACCGaaa > 1:94738/1‑250 (MQ=255) aTCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATTCGTTGTGCTAGTTCCCGGGGGGCGGTACCAGC‑AAAAAG‑CCTCATATCCGGCACGAGAAGAACCCCAGG‑CATGCGTCCCTTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGGGGATTAAAGAGGGCGATGCAACGGCTGGAACAAGGGGACGGTGTCCCCGaaagcacg > 2:166695/1‑246 (MQ=255) aTCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGaa < 1:166695/245‑1 (MQ=255) aaGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGccc < 2:373526/251‑1 (MQ=255) aaGCGACCTACAACGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCCATAAGTTTGGCCAGTTTCTGGGGGGGGTTACCAGC‑AAAAAA‑CTTCCTAACAGGCACGAGAAGAACCCCAGGGCA‑GCGTCCATTGGGGGGAAGAATCTGCCGGAAAATGAG‑CGGGCCAGGCATGATCCCTTCCAGGCGGGGGGTTTAAGGACGCGATGCAACGTCTGGAACAAGGAGACGGTGTCACCCAAACTccacctgccc > 1:383477/1‑242 (MQ=255) gACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGGTGTGCTAGTTCCGGGGGGGCGGTAACAGC‑AAAAAG‑GCTCATATCAGGGCCGAGAAGAACCTCAGG‑CATGCGGCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAAGCATGATTCTTTCCCGGGGGGGAATTAAAGAGCGGGATGCAAAGTCTGGAAAAAGGGGACGTTGTCACCGAAACTCAGCCTGCCCGGcc > 1:98525/1‑250 (MQ=255) aCCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGGTCCGGGGGGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGGGAAGAAACTCAGG‑CACGCGTCCATTTGTGGAAAGAAACTGCCGAAAAATGTG‑CGGGCCAGGCATGATCCTTTCCCGGCGGGGTATTAAAGAGCGCGGTGGAAAGTCTGGAACAAAGGGAAGTTGTTACCGAAACTCAGCTTGCCCCGCtt > 1:86791/1‑251 (MQ=255) gCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCtgt < 1:169766/251‑1 (MQ=255) ccGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTTCGGGGGGGCGTTAACAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAAACTCAGG‑CAAGCGTCCATTGGTGGAAAGAATCTGCCGAAAAATGTG‑CGGGCCAGGCATGATCCTTTTCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAAGGGAAGTTGTCACCGAAACTCAGCTTggc > 1:305569/1‑227 (MQ=255) ccGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGcc < 2:305569/229‑1 (MQ=255) gtACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGaaa < 1:223665/251‑1 (MQ=255) cAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCCCTGTGCCATGGGGaa > 2:8035/1‑247 (MQ=255) aGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGAtt < 1:161232/251‑1 (MQ=255) ggCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTa < 2:104907/251‑1 (MQ=255) gTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTgg < 1:170721/174‑1 (MQ=255) gTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGAGTATTAAAGAGCGCGATGCAACGTCTgg > 2:170721/1‑174 (MQ=255) tGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCt > 1:341654/1‑251 (MQ=255) gggCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGcc < 2:120795/249‑1 (MQ=255) aGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCAtt > 2:91861/1‑251 (MQ=255) aGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATAGCAGGCACGAGAAGAACCTCAGT‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGGGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCAtt < 2:137622/251‑1 (MQ=255) gTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAACATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCATTg > 2:33861/1‑251 (MQ=255) ggTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGccc < 2:159781/183‑1 (MQ=255) ggTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGccc > 1:159781/1‑183 (MQ=255) gTGGCGTTACCAGC‑AAAAAG‑CTTCGTATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCATTGAGCCATTc > 1:28386/1‑251 (MQ=255) | ACAGCGGTGATACGACCTGCGGAAGCACGACGCAGGGCATCAACCATAACGACTAATTCCATCAGGTTGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTGTACGCTGACTTCGCCATCGCTAAAGCGACCTACAGCGGCGTCGCCGAGTGAAGTGTACAGGCGGTTGGCAATACGTTGTGCTAGTTCCGGGGTGGCGTTACCAGC‑AAAAAG‑CTTCATATCAGGCACGAGAAGAACCTCAGG‑CATGCGTCCATTGGTGGAAAGAATCTGCCGAAAACTGTG‑CGGGCCAGGCATGATCCTTTCCAGGCGGTGTATTAAAGAGCGCGATGCAACGTCTGGAACAAGGTGACGTTGTCACCGAAACTCAGCTTGCCCGGCTTAAAGCATGGCTCTGTGCAATGGGGAAAGATTAGCGCCTTTCGCCACAAAGCCATTGAGCCATTC > NC_000913/1261613‑1262091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |