| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 40.0% | 99.4 / 12.5 | 60 | V288G (GTG→GGG) | cusA | copper/silver export system RND permease |
| Reads supporting (aligned to +/- strand): ref base T (6/30); new base G (24/0); total (30/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTT > NC_000913/599353‑599822 | aaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTGCGGTGCGG‑CAAAAACGc > 1:518966/1‑251 (MQ=255) ccAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGccc < 1:515982/251‑1 (MQ=255) ggAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCgag < 1:335804/251‑1 (MQ=255) gcgggctgTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGt < 2:130576/251‑1 (MQ=255) ggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGTGGGGTGGTGATCCTGCGAt < 1:338830/223‑1 (MQ=255) gTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATcgcc < 2:27098/251‑1 (MQ=255) atcgaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTACCGCGATCCGG‑CAAAAAAGccccggaagggaaagccgccctga > 1:340993/1‑229 (MQ=255) atcgaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCTGCGGTCCGG‑CAAAAAAGCCCCGGGAGGGATCGCCGCCGTgg > 1:169152/1‑249 (MQ=255) ggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑Tgg < 2:222372/251‑1 (MQ=255) gaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑t < 2:452317/251‑1 (MQ=255) atatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGa < 2:17201/251‑1 (MQ=255) atGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCTGCGGTCCCG‑CAAAAACGCCCCAGGAGGGGTCGCCGCCCTG‑CAGGGCAAAC‑CGGGAACGcaggaaa > 1:100430/1‑244 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGGGCCTTCGGTCCGG‑CCAAAACACCCCAGAAGAGATCGCCGCCGTG‑GAGGGCAAACGTGAAAAC‑C‑CGAAAAGTAGTCt > 2:280783/1‑251 (MQ=255) aGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTGCGGACCGG‑GAAAAACGCCCCAGAAATGATGGCCGCCGTG‑AAGGACAAAA‑TGGAAAccgtgcaacattacggtaccgc > 1:335091/1‑230 (MQ=255) gCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGTCCGG‑CAAAAAAGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGGAAAGC‑TGGAAAGGAGTCTGGCggg > 1:234400/1‑249 (MQ=255) gatATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCTGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGc < 2:268109/249‑1 (MQ=255) tATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGATCCTGCGGTCCCG‑CAAAAACGCCCGAGAAGGGATCGCCGCCGTG‑AAGGACAAAA‑TGGAAAAGC‑TGGAAAGGAGTCTGCCGGGAggggg > 1:32560/1‑248 (MQ=255) gCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAAAGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATACTGCGCTTCGG‑GACAAACGCCCGGGAAAGGAACGCCGCCGGG‑CAGGGAAAAC‑TGGAAACGA‑CGGAAAGGAGTCTGCCGGGAGGGGTggtgg > 1:230061/1‑248 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTGCGG‑GAAAAACCCCCCCGAAGGGAACGGCGGCGTGGAGGGACAA‑C‑TGGAAACGC‑TGACAAGCAACCTGCCGGGAGGCGGGGGGATAGATa‑cc > 1:116788/1‑250 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CAt < 2:343328/251‑1 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACg < 1:139288/249‑1 (MQ=255) aaTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATc < 2:116788/250‑1 (MQ=255) caTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGGGGGGGGGGGGGGGGACCTGCGGACCGG‑GCAAAACGCCCGAGAAGTGGTCGCCGCCCGG‑CAGGACAAAC‑TGGAAAAGC‑TGAAAAAGAGTATGCCGGGAGGCGGGGAGAGAGTTA‑AAA‑CATACGATCGcagcc > 1:96583/1‑251 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGGGGGGGTCCCGCGAGCCGG‑CCAAAACGCCCGAGAAGCGGCAGCCCCCCGG‑AAGGGCAAAA‑TGGGAAAGC‑TGAAAAAAAGTCTGCCCGGAGGGGTGGGGATAGTTA‑AAAACAAAC‑ATCGCAACCAGCTCCTTgt > 2:86156/1‑250 (MQ=255) gCCAGTGAAATGGGCGTGACCTTGTATCGGCGCGATGTTGCAAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACAAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCAATCCGG‑CAAAAACGCACGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTAATTGAcct < 2:76315/251‑2 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTGCCGCGATCCCG‑GAAAAACGCCCGGGAAGGGATCGCCGCCGGG‑GAGGAAAAAC‑TGGAAACGC‑TGAAAAGGAGTTTGGCGGAAGGCGGGGAGGTAGTTA‑CCA‑CATACGAACGCAGCCAGCTCCTTGAACGCGcc > 1:421171/1‑251 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCAt < 1:292651/251‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 1:403467/251‑1 (MQ=255) aTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCGGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TAGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 2:353586/248‑1 (MQ=255) aTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc < 1:203323/251‑1 (MQ=255) aTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGG‑CAAAAAAGCCCGCGAAGGGATCGCCGCCGTG‑AAGGGCAAAC‑TAGAAAAGC‑TGAAAAGTAGTCTGCCGGGAGGGGTGGGGGTAGTTA‑CAA‑CATACGAACGCAGCCCGCTcctttacccccccctcaa > 1:353586/1‑233 (MQ=255) aTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGG‑GAAAAACGCCCCAGAAGGGATCGCCGCCGGG‑AAGGGCAAAC‑TGGAAACGC‑TGGAAAGAAGTCTGCCGGGAGGCGGGGGGATAGGTA‑AAA‑CATACGAACGCAGCCCGCTCCTTGACCGCGCCCTCggc > 1:228449/1‑249 (MQ=255) cGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGCG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaaac > 1:361429/1‑249 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCCGCGATCCGG‑CAAAAACGCCCGAGAAGTGGTCGCCGCCGGG‑ACAGACAAAA‑TGGGAAAGA‑TGAAAAGAAGTCTGCCGGCAGGGGGGGGGAGATATA‑CCA‑AATACGATAGCAGCCAGCTCATTGACCGCGCCATCG‑CAACCCTCAGCgg > 2:44610/1‑251 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTCCGATCCGG‑CCAAAACGCCCGAGAAGGGATGGCCGCCGCG‑AAGGACAAAA‑TGGTAACACAGGCAAAG‑AGGCTGGCGGAAGGCGGGGGGAGAGTTAACAC‑CA‑ACGATCCCAGCCAGCTCCTTGAACGCGCCCTCCGCAACC‑TCCGCGGCa > 2:66588/1‑249 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGG‑CAAAAACGCCCGGGAAGGGATCGCCGCCGTG‑GAGGGCAAAC‑TGGAAACGC‑TGAAAAGGAGTCTGCCGGAAAGGGGGGGGATAGGTA‑CAA‑CATACGAACGCAGCCAGCTCCTTTACCGCGCCCTCGAGACCC‑CCAGCgggc > 2:477623/1‑247 (MQ=255) tGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGTGGTCCTGCGGACCGG‑CAAAAAAGGCCGCGAAGTGATCGCCGCCGCG‑AAGGACAAAC‑TGGAAAACC‑CGAAAAGAAGGATGGCGGAAGGGGGTGAGATAGTTA‑CAA‑AATACGATCCCCGCCCGCCCATTTGCCGCGCCATCCACAACC‑TCAGCGGcccgttg > 2:403016/1‑245 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGGCAAAAA‑GCCCGAGAAGGGATCGCCGCCGGG‑GAGGGCAAAA‑TGGAAACGC‑CCAAAAGGAGTCTGGCGGGAGGCGGGGGGGTAGTTA‑CAA‑AAAACGACAGCAGCCCGCCCATTGAACGCGCCacccaacacctcccccgggagtggcg > 2:295264/1‑226 (MQ=255) cAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTgtggt < 1:120410/251‑1 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGc < 2:169152/251‑1 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCCG‑CAAAAACGCCCGCGAAGGGATCGCCGCCGTG‑AAGGGCAAAA‑CGGAAACGC‑TGAAAAGTAGTCTGCCGGGAGGGGTGGGGGTAGTTA‑AAA‑CATACGACGGCCGCCAGCCCATTTACCGCGCCCTCGACCACC‑CCAACGGCAAAGTGGTGGAAAAGGTTATTGtggtggg > 2:219911/1‑250 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAg < 1:280783/251‑1 (MQ=255) ggAGATGCGCCGGGGCCTTGCCGACCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAACCGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAATGCGTGGAGATAGTTA‑CAA‑CATCCGATCGCAGCCAGCTCATTGACCGCGCCATCGACGACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCt < 1:261918/251‑1 (MQ=255) aTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGATCCGG‑CAAAAAAGCCCGAGAAGGGAGCGCCGCCGGG‑AAGGACAAAC‑CGGAAAAGC‑GGAAAAGGAGGCTGCCGGAAGGCGGGGGGATAGGTA‑CAA‑CAAACGGTCGCCGCCAGCTCATTTACCGCGCCCCCGACAAAC‑TCCGCGGCCAGGTGCTGGGAGGGTTTTTTGTGGGGGCgggaggctgggg > 2:51484/1‑241 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGCGAACCCG‑CAAAAACGCCCGAGAAGGGATCGCCGCCGGG‑AAGGGCAAAC‑TGGAAAAGC‑TGAAAAGTAGTCTGCCGGGAGGCGGGGGGAAAGTTA‑CAA‑AATACGAACGCCGCCCGCTCATTTACCGCGCCCTCGACAACC‑CCAGCGGCAAGGTGTTGGGAGGGTTTTTTTTGGGGGCgggggggtcgggggcg > 2:335867/1‑237 (MQ=255) tGCCGAACTAAACGGCGAAGGCGAAGTGGAGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg < 2:41067/250‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCCGTTTCTCTGGCa < 1:390559/251‑1 (MQ=255) ccGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAG‑CATACGATCGCAGCTAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAt < 1:427944/251‑1 (MQ=255) gAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGATCCCGCGGTCCGG‑CAAAAAAGCCCGAGAAGGGATAGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGGAGTCTGCCCGAAGGCGTGGAGAAAGTTA‑CAA‑CATACGATCGCCGCCAGCTCATTGACCGCGCCATCGACAACC‑TCCGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGGAGTCTGTGCGCTGTTTCTCTGGCAtgt > 1:217751/1‑251 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgtg < 2:361429/251‑1 (MQ=255) aCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTgc < 1:172156/251‑1 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt < 1:410716/251‑1 (MQ=255) aaCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTc < 1:86156/251‑1 (MQ=255) ggcgaaggcgaaGTGGCGGGCGGGGGGGGGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGGGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGGAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGGAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCggg > 1:319503/1‑250 (MQ=255) cgaaggcgaagTGGCGGGCGGGGGGGGGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGGGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGGGTGGAGATAGTTA‑CAA‑CAAACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGGTTATTGTGGGGGCGGTAGGCTTTGCGCTGTTTTTCTTGCATGTGCGCTCGgcgc > 1:550843/1‑251 (MQ=255) ggcgaagTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtggt < 2:421171/251‑1 (MQ=255) cgggcgggGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGattatt > 1:948/1‑251 (MQ=255) gggcgggGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTAttt > 1:156191/1‑251 (MQ=255) gggcgggGTGGAGATCCTGCGATCCGG‑CAAAAAAGCCCGAGCAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAACAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGTTCGGCGCTGGTCGCGATTAttt > 2:459186/1‑251 (MQ=255) ggggTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt < 1:475776/251‑1 (MQ=255) | AACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGG‑CAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAAC‑TGGAAACGC‑TGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTA‑CAA‑CATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACC‑TCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTT > NC_000913/599353‑599822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |