| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 343,444 | 0 | A | G | 26.5% | 152.5 / 10.2 | 68 | G187G (GGA→GGG) | yahK | aldehyde reductase, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (13/37); new base G (18/0); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCT > NC_000913/343197‑343693 | actactGTGATCCCATGCCCGGCACCTTTAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACat < 2:537815/251‑1 (MQ=255) gtgATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATgggg < 1:185924/251‑1 (MQ=255) gtgATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGGGGTCGGCATCGGCGGTCTGGGGCATATgggg > 1:123185/1‑251 (MQ=255) cacaTGACCGGCCCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTa < 1:134682/250‑1 (MQ=255) cacaTGACCGGCACCTATCACTCGCCGCCGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATGGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCAGCATCGGCGGTCTGGGACATATGGGG‑ATTaa < 2:374447/251‑1 (MQ=255) caTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCatgttgggggttaa > 2:236527/1‑238 (MQ=255) aTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCt < 2:222458/251‑1 (MQ=255) aTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCt < 2:309613/251‑1 (MQ=255) gACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCCTTTGGGG‑ATTaaacttg > 1:518324/1‑246 (MQ=255) aCCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGc < 1:204980/251‑1 (MQ=255) ggCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCT‑gggccc > 1:357260/1‑247 (MQ=255) ccTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCAcgcg < 2:37219/251‑1 (MQ=255) ccTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAACT‑GGGCCAcgcc > 1:189450/1‑250 (MQ=255) aaCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑At < 1:509642/230‑1 (MQ=255) cTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCCTATGGGG‑GTTAAGGT‑GGCCCAcgcgggtgggg > 1:405130/1‑244 (MQ=255) aCGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACAtgt < 1:170383/251‑1 (MQ=255) gAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCTCCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCAtt < 1:107365/251‑1 (MQ=255) cGGGCCGTACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTAcc < 2:266366/251‑1 (MQ=255) aTACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCt < 2:275714/251‑1 (MQ=255) ctGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGGCGGCATCGGCGGGTTGGGGGATATGGGGGATTAAGAG‑GGCCC‑CGCGGTGGGGGGACCTgtggggggcttttccaattcttaggg > 2:87533/1‑229 (MQ=255) ggggCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGcn < 2:246057/250‑2 (MQ=255) gggCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGc < 2:171156/249‑1 (MQ=255) gcTCACAACAGATCGTCGTTCATGAGCGATAGGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCTCGTATTCGCCGCGACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCTATGGGGGCACATGTGGTGGCATTTACCACTTCTg < 2:412634/236‑1 (MQ=255) aCTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACAACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGGGGGCGTGGTCGGCATCGGCGGACTGGGACATATGGGG‑GATAAGCT‑GGCCCAAGCGATGGGGGGACATGTGGGGGGCTTTACCACTTCTGAgaacggaagaac > 1:412634/1‑239 (MQ=255) tCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCT‑GGCCCCCGCGATGGGGGCACATGTGGGGGCATTTACCACTTCTGTGGCAAAACGCGAAgg > 1:285810/1‑250 (MQ=255) gtcgtTCATGAGCGATATGTTCTGCGTATTCGACACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTGCGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCt < 2:495579/251‑1 (MQ=255) gtcgtTCATGAGCGATAAGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCt < 1:34394/251‑1 (MQ=255) cgtTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTg < 2:357260/250‑1 (MQ=255) gtTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATTGGG‑GTTAAGCT‑GGCCCACGCGGTGGGGGGACATGTGGGGGGATTTTCCCCTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTggg > 1:265325/1‑251 (MQ=255) gtTCATGAGCGATATGTTCTGCGTATGAGTCCTCCGCAAGAGCAGCTGGAGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAATTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTggg < 2:362627/251‑1 (MQ=255) gAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑GTTAAGCT‑GGGCCCCGCGATGGGGGGACATGTGGGGGCATTTACCACTTTTTAGGCAAAAAGCGGAGCGGCAAAAGCCCCGGGGGCCgg > 1:413177/1‑250 (MQ=255) gATATGTTCGGCGTATTCGGCACCCGCATGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGAGCACCACGTATTCGCCGCTACGGCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGaa < 2:430677/251‑1 (MQ=255) atGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgt < 1:78708/250‑1 (MQ=255) gTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAgttgt < 2:265325/251‑1 (MQ=255) tCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCT‑GGCCCACGCGATGGGGGGCCATGTGGGGGGCTTTACCCCTTCTGAGGCAAAACGCGAAACGGGAAAAACCCTGGGGGCCGGTGAAggtgtt > 1:441798/1‑250 (MQ=255) cGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCT‑GGCCCCCGCGATGGGGGCACATGTGGTGGCATTTTCCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTaaatc > 1:230119/1‑248 (MQ=255) cTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑ATTAAGCT‑GGCCCACGCGGTGGGGGGACATGTGGGGGGATTTACCACATCTGGGGCAAAACGCGAAAGGGGAAAAACCCCGGGGGCCGGTGAAGGTGTTAAATCACGCAATGCCGGTGAGA‑Tgggggg > 1:64476/1‑247 (MQ=255) ggcggcGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑Tggcggc < 1:287313/249‑1 (MQ=255) ggcggcGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTc < 2:413177/251‑1 (MQ=255) ggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAACT‑GGCCCACGCGATGGGGGCACATGTGGGGGCATTTACCCCTTCTGAGGCAAAAAGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGGTGTTAACTCACGCAATGCCgatggga‑tgggggggcatc > 1:457989/1‑242 (MQ=255) gcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCt < 2:123185/251‑1 (MQ=255) cggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCC‑GGCCCACGCGGTTGGGGGACATGTGGTGGCATTTTCCCCTTTTTAGGCAAAACGCGAAGCGGCAAAAGACCCGGGGGCCGGTGAAGTTGTTTAATCCCGCAATGCCGATTAGA‑Tggcggcccctctg > 2:114377/1‑244 (MQ=255) ggCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGAT‑GGCCCCCGCGGTGGGGGCACCTGGGGGGGCATTTACCCCTTCTGTGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGGTGAAGTTGTTAACTCACGCAATGCCGATGGGA‑TGGCGGCTCATCTGa > 1:41498/1‑248 (MQ=255) gcgccTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAagag < 2:489860/248‑1 (MQ=255) ttgttgTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTc < 2:472734/249‑1 (MQ=255) tgttgtGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGa < 2:395776/250‑1 (MQ=255) tgtgCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGGGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑GTTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGGGGGATTTTCCACCTCTGAGGCAAAAAGCGAAGCGGCAAAAGCCCTGGGGGCCGAGGTAGTTGTTAAACCAAGCAAAGCCGATGAGA‑TGGCGGGCCATCTGAAGAGTTTCGAtttact > 1:497392/1‑248 (MQ=255) gtgCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CAt < 1:202462/250‑1 (MQ=255) gCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTCTCGATTT‑CAttt < 1:395338/250‑1 (MQ=255) gccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGGTGTTAAATCACGCAATGCCGATGAGA‑AGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCcac > 1:304067/1‑251 (MQ=255) cTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑AGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATa > 1:143458/1‑250 (MQ=255) aCGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGGATATGGGG‑GTTAAGCG‑GGCCCACGCGATGGGGGCACATGGGGGGGGCTTTAACACTTCTGAGGCAAAAAGCGCAGCGGCAAAAGCCCTGGGGGGCGGTGAAGTTGTTAACTCACGCAAAGCCGATGAGA‑TGGCGGGTCATCTGAAGAGTTTCGCTTT‑CTTTTTTAATAAAGAAGCTGCGCCACATaaac > 2:375547/1‑249 (MQ=255) gTCACTGGCAGGCCGAGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTCGGAACCATGGGG‑GTTAAGCTCGGCCC‑CGCGATTGGGGGAAATGGGGTGGCATTTTCCAATTTTGGGGGCAAACGCGAACCGGCAAAAACCCCGGGGGTCGCTGGAGGTGTTTACTCATGACATGGCCATG‑GAGTGGCGGCTCAAATGAAAAATTTCGATTT‑CCTTTTTAATACATTAACCGCGCCAACTAAtctc > 2:206514/1‑251 (MQ=255) aCTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCAAATGGGG‑GTTAAGCT‑GGGCCACGCGGTGGGGGGACATGTGGGGGCCTTTACCACCTCTGAGGCAAAACGCGAAGCGGCAAAAACCCCGGGGGGCGGTGTAGGTGGTAAATCACGCCATTGCGGTGGGA‑TGGCGGGCCATCTGAAGAGGTTCGATTTTCATTT‑GAATACAGTAGCTGCGCCCCATAAACTcgac > 2:500382/1‑251 (MQ=255) ggCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTcgacg < 1:236527/249‑1 (MQ=255) ggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑ATTAAGCT‑GGCCCACGCGATTGGGGCACATGTGGGGGCATTTACCACTTCTGAGGGAAAAAGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCCCATCTTAAAAGTTTCGATTT‑CATTTTTAAAAAAGAAGGTGCGCCACATAATCTCGACGATTTTaccccc > 1:436866/1‑248 (MQ=255) gggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTTAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGAGTTTACCACCTTGc < 2:189450/251‑1 (MQ=255) gTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCATATGGGG‑AGTTAGCT‑GGCCCACGCGCTGGGGGCACATGTGGTGGCAATTACCAATTCTGAGGCAAAACGCGAAGCGGAAAAAGCCCCGGGGGCCCGTGAAGTTGTTAACTCACGCAATGCCCAGGAGA‑TGGCGGCTCATCTGGAAAGTTTCGATTT‑CAATTTGAATACAGTAGCTGCGCCACCTAATCTCGAAGATTTTCCCACCTTGCtt > 2:442005/1‑250 (MQ=255) aGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGGGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAACCCTGGGGGCCGGTGAAGTTGTTAAATCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGGTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGCAGGTTTTTCCACCTTGCTTAAGCGTg > 2:18089/1‑251 (MQ=255) gCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCG‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGc < 2:216675/251‑1 (MQ=255) tCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCtg > 2:512165/1‑251 (MQ=255) ggTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCtggttgg > 2:450752/1‑251 (MQ=255) gTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCtggttggt < 1:502881/251‑1 (MQ=255) tGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTgcg > 2:233791/1‑251 (MQ=255) ggACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGcc > 1:371102/1‑251 (MQ=255) gACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCCCTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCAAGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCt < 2:436866/251‑1 (MQ=255) gACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCt < 2:480355/251‑1 (MQ=255) gACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCt > 1:480355/1‑251 (MQ=255) | ACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGG‑ATTAAGCT‑GGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGA‑TGGCGGCTCATCTGAAGAGTTTCGATTT‑CATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCT > NC_000913/343197‑343693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |