| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,488,473 | Δ111,735 bp | yjgR–yjjA | 100 genes yjgR, idnR, idnT, idnO, idnD, idnK, ahr, leuX, insC6, insD6, yjgZ, insG, nanX, nanY, ythA, insO, insI3, insO, insO, fecE, fecD, fecC, fecB, fecA, fecR, fecI, ykiE, insA7, yjhU, yjhF, yjhG, yjhH, yjhI, sgcR, sgcE, sgcA, ryjB, sgcQ, sgcC, sgcB, sgcX, yjhP, yjhQ, topAI, ythB, nanS, nanM, nanC, fimB, fimE, fimA, fimI, fimC, fimD, fimF, fimG, fimH, gntP, uxuA, uxuB, uxuR, yjiC, ytiC, ytiD, idlP, iraD, hypT, iadA, yjiG, yjiH, kptA, yjiJ, yjiK, ytiA, yjiL, yjiM, yjiN, mdtM, ytiE, yjiR, yjiS, yjiT, mcrC, mcrB, mcrB, symE, symR, hsdS, hsdM, hsdR, mrr, yjiA, yjiX, btsT, tsr, lgoT, lgoR, lgoD, opgB, yjjA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4488473 | 4600207 | 111735 | 56 [1] | [0] 55 | yjgR–yjjA | yjgR,idnR,idnT,idnO,idnD,idnK,ahr,leuX,insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO,fecE,fecD,fecC,fecB,fecA,fecR,fecI,ykiE,insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4488472 | 1 (0.020) | 55 (0.910) | 52/484 | 0.2 | 99.1% | intergenic (+72/+89) | lptG/yjgR | lipopolysaccharide transport system protein LptG/DUF853 domain‑containing protein YjgR |
| ? | NC_000913 | 4600208 = | 0 (0.000) | intergenic (‑19/+30) | yjjA/dnaC | DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC | |||||
CGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAA > NC_000913/4488223‑4488721 | cGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAt < 1:95703‑M1/251‑2 (MQ=255) cccgATGGGCGTGCGTATGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCGTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtg < 2:87200‑M1/250‑5 (MQ=255) aCCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtg < 1:513557‑M1/251‑5 (MQ=255) gATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCTAAACCGAAAGAACGAATAAAGGGAGGGAAGACTCCCTTTATTATTGTTAGCAAAGCGGGGTTCGTTCATTCCTGaagtgacg > 2:447034/1‑245 (MQ=255) gtgGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGGGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgcc > 2:400182‑M1/1‑231 (MQ=255) cGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccn < 2:245930‑M1/233‑11 (MQ=255) cGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgcca > 1:245930‑M1/1‑223 (MQ=255) gTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacgggg > 2:126094‑M1/1‑221 (MQ=255) tCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggatt > 2:365874‑M1/1‑218 (MQ=255) cAGTTTCGGTTTTGTCTTCTACGTCCTGGCCCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggatt < 1:42556‑M1/250‑34 (MQ=255) tttCGGTTTTGTCTTCTACGTCCGGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaat < 2:386824‑M1/250‑37 (MQ=255) tCGGTTTTGTATTCTACGTGCTGGACCAGATCTTCGGCCCGCTGTCGTTGGTTTATGGCATCACGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGAGAGCGAACGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatact > 2:212101‑M1/1‑212 (MQ=255) tctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctg < 1:37305‑M1/248‑49 (MQ=255) ccgaccctcttccgatccccgctgactttggtttatgGCACCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAATGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggcta < 2:20708‑M1/234‑60 (MQ=255) tCGGCCCGCTGACATTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaattctctttacctgttacccgtctacggtagctatc < 1:442379‑M1/249‑71 (MQ=255) ccGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAATGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggcta > 1:20708‑M1/1‑174 (MQ=255) gACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGGAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttga > 1:351454‑M1/1‑169 (MQ=255) ggTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcaccca < 1:158468‑M1/251‑89 (MQ=255) tGGCATCGCGCCGATCATCGGCGGACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtagccagtataccgccagaaacgggggttaatactctttacctgttacccggctacgtaagatatccaagttgaagatcacccacaaacc > 2:476605‑M1/1‑157 (MQ=255) cccGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacc < 2:46424‑M1/251‑101 (MQ=255) cccGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttac < 1:530358‑M1/250‑100 (MQ=255) ccgATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTACTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcgcccacaaactgttacccagg < 2:443271‑M1/251‑105 (MQ=255) cgATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggc > 1:354512‑M1/1‑146 (MQ=255) gATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcg > 1:539388‑M1/1‑145 (MQ=255) gTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGATAAAATCGTAACCGAATGAACGAATAAAGTGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatc < 2:219425‑M1/249‑120 (MQ=255) gTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgtt > 1:391167‑M1/1‑130 (MQ=255) gTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgtt < 2:391167‑M1/180‑51 (MQ=255) aaGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttc < 1:400182‑M1/251‑128 (MQ=255) aGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacacggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcg > 2:540133‑M1/1‑123 (MQ=255) ttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacgggagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaactt < 2:108411‑M1/250‑140 (MQ=255) tcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaactt < 1:305534‑M1/249‑140 (MQ=255) gCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctctt > 1:441493‑M1/1‑101 (MQ=255) gtgtctgttAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttcc < 1:359598‑M1/245‑153 (MQ=255) aaTGAGAAAATCGTAACCGAATGAACGAAGAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgtt < 2:53806‑M1/251‑164 (MQ=255) tGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttgg > 2:152049‑M1/1‑86 (MQ=255) agaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCGCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgggtcgccagtataccgccagaaacggtgattaatactcgttacctgttacccggctacggtagctatcccagttgaagatcgcccacaaacggttacccaggcgcatacgttccatcgctccttcgcccatcaacttggtcatctcttccagatcactgttggtc < 2:420089‑M1/251‑168 (MQ=255) gTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatccc < 1:365874‑M1/251‑176 (MQ=255) aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTTTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtatgccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcgcccacaaactgttacccagtcgcatacggtccatcacgcgttcgcccagcaacgtggtcatctcttccatattactgttggtcagcatcccggttgggcgttt < 1:308643‑M1/251‑188 (MQ=255) aaaGGGAGCGAAAGCTCCCTTGATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcccccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatagtactgttggtcagcatcccggttgggcgtttggaaga < 1:152049‑M1/251‑194 (MQ=255) gggAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaaga > 1:462657‑M1/1‑55 (MQ=255) aGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgctggtcagcatcccggttgggcgtttggaagaagagcg > 2:263778‑M1/1‑52 (MQ=255) gAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcg > 1:174109‑M1/1‑49 (MQ=255) attattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctgg > 2:297590‑M1/1‑36 (MQ=255) ttattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaa < 2:210686‑M1/229‑195 (MQ=255) ttattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaa > 1:210686‑M1/1‑35 (MQ=255) tAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgac < 2:216238‑M1/236‑209 (MQ=255) tAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgac > 1:216238‑M1/1‑28 (MQ=255) aaaGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggt > 2:216293‑M1/1‑24 (MQ=255) aaaGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggt < 1:216293‑M1/190‑167 (MQ=255) aGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctgtttgatgatcacttt > 2:176495‑M1/1‑22 (MQ=255) tCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtat < 1:113293‑M1/250‑237 (MQ=255) cGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatcttgttgatgatcactttgtcgtatt < 2:462657‑M1/250‑238 (MQ=255) cATTCCTGAtgtgtcgacagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagattacccacaaactgttaccccggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatgccgggtgggcgtttggaagaagagcggcgatcgacgatctggttcatgatcactttttcgtaattcgat > 2:52923‑M1/1‑9 (MQ=255) aTTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtatttcgatt < 1:126094‑M1/251‑244 (MQ=255) tCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtatttcgattc < 1:5709‑M1/250‑245 (MQ=255) gAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtatttcgattcggtct > 1:203274‑M1/1‑2 (MQ=255) | CGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAA > NC_000913/4488223‑4488721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |