| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 30.9% | 66.4 / 12.0 | 42 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| Reads supporting (aligned to +/- strand): ref base C (10/19); new base T (13/0); total (23/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATCAGTG > NC_000913/4604101‑4604593 | aaTAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttttt > 1:23798/1‑249 (MQ=255)aaTAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttct < 1:336496/251‑1 (MQ=255) aTAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑ATctttttttttttttt > 2:23518/1‑247 (MQ=255) tAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTttttctttttcttc > 1:311350/1‑249 (MQ=255) aGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGcc > 1:112233/1‑251 (MQ=255) gcAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGTTCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATgag < 1:18573/251‑1 (MQ=255) tGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTTCCCTGAGAAGTgg > 1:10115/1‑250 (MQ=255) gCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAtttttttttttttttccattggaagag > 2:163486/1‑234 (MQ=255) agaACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACAAAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag < 1:373300/251‑1 (MQ=255) aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttctttttc < 1:314620/228‑1 (MQ=255) aacttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCAtttttttttttttcaaacgggagaacggcgtgttgg > 2:314620/1‑227 (MQ=255) gTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCctg < 1:334266/251‑1 (MQ=255) gagaTGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAGGGGAGAGGGGG‑GTTATCTTTCCTGGCTGaa > 2:362192/1‑250 (MQ=255) cGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGGGCGCCGGGAGGG‑GTTTTCttttctgtcgtaaattgggg > 2:339067/1‑232 (MQ=255) gaagaGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGGGAAGGGAGAGCAGAGAGGG‑GTTATTTTTTCTGCGTGAACTGGCG‑ATTAAG‑ttttcccggcacccgcggtttg > 1:362504/1‑232 (MQ=255) cGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGAGAAGTGAGCGCAGAGAGGG‑AGTATCTTGCCTGACTGAAATGGCG‑ATTAAG‑TTTCCGCGGAACCGGCGGTTTGTTATTTCGgatg > 1:405637/1‑251 (MQ=255) aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCCGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTTCCATGAGAAGGGAGCGCCGCGGGGG‑GTTATCTTGCCTGTCTGCACTGGCC‑ATTTCG‑ATTCCTCCGAACCGGCGGTTTGTTAATGGGGATGATGATATTggaa > 1:505525/1‑247 (MQ=255) aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGTCTGAACTGGCG‑ATTAAG‑TTTTCGCGGACCCGGCGTTTTGTTATTGCGGGGGATGTTATTTAAGc > 2:150493/1‑251 (MQ=255) aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTCTTTCATGGGAAGTGAGCGCCGAGAGGGGATT‑TTTTTCCTTGCTGAACCGGGG‑GTTAAG‑TTTTCGCGTACCCGGCGTTTTGGTTTTTCGGGTGATGATAtttaaac > 2:126403/1‑246 (MQ=255) gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCg < 2:10115/250‑1 (MQ=255) gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGTAGCTCGGCt < 2:318107/251‑1 (MQ=255) nttGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTAATTTTTTTTTTTTTTGCCATGAGAAGTGGGCGCCGAGAGGG‑ATTATCTTTCCTGACTCAACTGGCG‑CTTAAG‑GTTTCTCGGACCCGGCGGTTTGTTATTGTGGATGATGATATTGTAGCTCGGCTgctttggttattgttgcc > 2:242442/2‑234 (MQ=255) tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCt < 2:112233/250‑1 (MQ=255) aGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACgg < 2:222607/251‑1 (MQ=255) gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑GTTATCTTGCCTGACTGGAATGGCG‑GTTAAG‑TTTTCGCGTACCCCGCGTTTAGTTATTTCGGGTGATGATATTGAAGCTCGGCGGATTGGTTCATTGTCGCCATCCCCCCCGGACgggggat > 1:27202/1‑246 (MQ=255) aaCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTGCCCTGAGAAGTGAGCGCAGAGGGGG‑ATTTTTTTGCCTGTCCGAACTGGCGGTTTAAG‑TT‑CCGCGGACCCGGCGGTTTGGTATTTCGGGTGGTGGTATTTAAGCTCGGCTGGGTGGGTTATTTTCGCCCTTACCGCTGGGCGGTGTATTTAATAAAgg > 2:144920/1‑250 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGGGAGCGCCGAGAGGG‑GTTATCTTTCCTGACTTGACTGGCG‑ATTAAG‑TTTCCGCGTACCCCGCGTTTTGTTATTGCGGGTGATGGTATTGTAGCTCGGCTGGTTGGTTTCTTTTCGCCATCACCGCCGGGCGGGGTATTTAATAAAGCGGCAAAGCTggg > 2:272753/1‑250 (MQ=255) aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑Att < 1:150493/251‑1 (MQ=255) aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTTGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑Atttt < 2:382374/251‑1 (MQ=255) aCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGGGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑GTTTAGATTTCC‑CGTACCCCGCGGTTAGTTATTGCGGGTGTTGATATTTAAAATCGGCTGATTGGTTCATTGTTGCCATCACCGCTGGGCGGTGTATTTAGTAAAGCGGCAACGCTGGGG‑AGTTTtgatc > 2:269641/1‑250 (MQ=255) cAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCATTTTTTTTTTTTTTGCCATGAGAAGAGAGGCCAGGGGGGG‑GTTATTTTTCCTGGCTGAAATGGCG‑AGTAAG‑TTTCCGCGCACCCGGCGTTTAAGTATTGTGGATGATGATATTGCAGCTTGGGTGCATGGGTCATTTTCGCCATCACCGCTGGGAGGGGTATTAAGTAAAACGGCAAAGATGGAGGATTTTtcttagg > 1:401797/1‑246 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAAct < 2:401797/251‑1 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCCTGAGAAGTGGGCGCAGAGAGGG‑GTTATCTTTCCTGACTGAACTGGCG‑ATTAAG‑TTTTCGCGTACCCGGCGGTTTGTTTTTTCGGGTGATGATATTGAAGCTCGGCTGATTGGTTTATTGTCGCCATCACCGCTTGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAAATCtt > 1:350003/1‑251 (MQ=255) aGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCttt < 2:405637/251‑1 (MQ=255) cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCttttt < 1:288583/250‑1 (MQ=255) ggATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGGAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTaa < 1:228626/251‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTaaa < 2:311350/251‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTaaa < 1:33235/251‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTaaa < 1:362192/251‑1 (MQ=255) ccATGTCGCGGATCTCGTTTGCGGCAGTCATTTTTTCTTTTTCGGCCATGAGAAGTGAGCGCAGAGATGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTGAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGTTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTTTCATTAAATgg < 2:304049/250‑1 (MQ=255) cgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCa < 1:272753/251‑1 (MQ=255) ggATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAg < 1:339067/251‑1 (MQ=255) aTCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTCCCCTCAGAAGGGAGCGCAGAGAGGG‑ATTTTCTTGCCTGACTGCACCGGCG‑ATTTAG‑TTTTCGCGTACCCGGCGTTTTGTTATTTCGGGTGATGATATTTTAGCTCGGCTGATTGGTTCATTGTTGCCCTCACCCCTGGACGGGGTATTTAGTAAAACGTCCACGCTGGTG‑ATTTTTTATC‑AGGAACTCTTTTTGTCATTTAATGGTGTACGTccggg > 1:124898/1‑247 (MQ=255) gcggcgGTCATTTTTTCTTTTTCTGCCATGAGAAGGGAGCGCAGAGGGGG‑ATTATCTTTGCTGACTGAACTGGCG‑ATTAAG‑TTTTCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTTTTGCCATCCCCGCTGGACGGGGGATTTAGAAAAAGGGCAACGCTTGGG‑GTTTTTCATCCGGGAAC‑CTTTTTTTCCTTAAAAGGGGTACGTCAGGcgaccgaccg > 2:561108/1‑251 (MQ=255) gcggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACt > 1:231366/1‑251 (MQ=255) gTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGa > 2:421828/1‑250 (MQ=255) cATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGATGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAAc > 2:60079/1‑250 (MQ=255) cATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAAc > 1:450262/1‑250 (MQ=255) aTTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCAGC‑AGGAACTCTTTTTGACATTAAATGGTTTACGTAAGGCGACCGACCGACTGAACa > 1:160908/1‑250 (MQ=255) tctttttctGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATCAGTg > 2:27085/1‑251 (MQ=255) | AATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGG‑ATTATCTTGCCTGACTGAACTGGCG‑ATTAAG‑TTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAG‑ATTTTTCATC‑AGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATCAGTG > NC_000913/4604101‑4604593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |