Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,830,325 | 0 | G | A | 29.5% | 64.9 / 12.9 | 44 | E461K (GAA→AAA) | xanP | xanthine:H(+) symporter XanP |
Reads supporting (aligned to +/- strand): ref base G (20/11); new base A (0/13); total (20/24) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.96e-05 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
ACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGAGCAGAACATATC > NC_000913/3830075‑3830561 | aCCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAg < 1:257802/251‑1 (MQ=255) cGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGaa < 1:117939/251‑1 (MQ=255) tGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑CGAATGGCTGAAAAACCTGCTCTCCTCCGGGAACGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGGATCTGATTTTCCCACCAGACAAA‑c > 2:471137/1‑249 (MQ=255) aaCGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGTCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTg < 1:322860/251‑1 (MQ=255) tcgcgtGTAATGTTTGGAGCCATCGCCGCCTCCGGTTTGCTCATCGTTTCTCGAGAGCCGCTGAACCATCGGGCGATTCTGTCTATCGCGCTGTCGCTGTCGGTTGG‑TCTGGGCGTGTCTCGGCAGCCGCTGATTTTGCAGTTTGCCTC‑TGAATGGTTGAAAAACCTTCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACt < 2:284434/244‑1 (MQ=255) aCGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTTCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGGATTACTGCCAT‑CGTGCTGAATCTGGTTTTCCCACCCGAAAAA‑CAGTAATT‑CACTgg > 2:298787/1‑251 (MQ=255) ngTAATGTTTGGCACCATCGCCGACTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGGGTGTCTCAGCAGGCGCTGATTTTGGAGTTTGCCCC‑TGAATGGCTGAAAAAACTGCTCTCCTCCGGGATCGCCGGGGGCGGTATTAATGCCAT‑AGTGGTGAATTTGGTTTTCCCAACAGAAAAA‑AAGTAATT‑TACTggggggg > 2:252074/2‑246 (MQ=255) tGGCACCATCTCCGCCTCTGGTGTGCGTTTCGTATCTCCGGAGCCGCGGAACCGTCGGTCGATTCTGATTATCGTGTTGTTGCCGGCGGTTTG‑TCTGGGCGTGTCTCTGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTGCTCCGGGAGCGCCGCGGTCGGTATTACTGCCCT‑TGTGCTGAATCTGATTTTCCCCCCAGAAAAA‑CAGTCATT‑CACTGGCGTCGGTATGATa < 2:155496/250‑1 (MQ=255) tGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGGATTTCTGCCAT‑CGGGCTGAATCTGATTTTCCCACCCGAAAAA‑CAGGAATT‑CACTGGCGGCGGTAAGATa > 2:177833/1‑250 (MQ=255) ccGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑GCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGATCTCCTCCGGGATCGCCGCGGGCGGGATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGGAAGATAATTAACGCCGCAAtctc > 1:103674/1‑250 (MQ=255) ttCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGTTTATCGCGTTGTCGCTGGCGGTGGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTCCAGTTTGCCCC‑TGAATGGCTAAAAACCCTGCTCTCCTCCGGGATCGCCGCGGGCGTTATTACTCCCAT‑CTTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGGGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAAc < 1:257673/249‑1 (MQ=255) cGTTTCTCGGGGGCCGCTGAACCTTCGGGCAATTCTTGTTATCGCGCTGGCGTTGGCGTTTGT‑TCTGGGCGTGTCTCAGCAGCCGCTGATTGTCAAGTTTGCCCC‑GGAATGGCTGAAAAACCTGCTCCCCTCGGGGATCGCCGGGGGCGGTATTACTGCCTT‑CGTGCGGACGCTGGTTTTCCCCCCAGAAAAA‑CAGTATTT‑CACTGGCGGGGGTAGGATATTTACCGCCGCAGTCTCACCTCTTTAACCa < 2:287687/250‑1 (MQ=255) ttCTCGTGCTCCGCTGAGCCGTCGGGGTATTCTGATCAGCACGGTGTCTCTGTCGTTTGG‑TTTTGGCGTTTCTCAGCATCCGCTGTTTTTGCAGTTTGCCCC‑GGATTGGTTGAAAACCCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CTTGCTGAATCAGATTTTCCCCCCAGAAAAA‑CAGTAATT‑CGCTGGCGGCGGAAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTc < 2:80722/250‑1 (MQ=255) gggCCGCTGACCCGTCGGGCGTTTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGTTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAACCCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCCCCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTg < 1:316847/249‑1 (MQ=255) gacccgtggtgctgttCTGTTTCTCGCGGTGTCTCTGG‑GGTTGGGTCGGGGCGTGTCTACGCCGCCTCTGATTTTGGA‑TTTGCCCCGTGATGGGCTGAAAACCCTGCTCTCCCCAGGGATCCCCGCGGGGGTTATTACGCCCAT‑GGTGTTAAATCGGTTTTCCCCCCCAAAAAAA‑CTGTAATT‑CACTGGCGGCGGTAAGATAATGCCCGCCGCTGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTgc < 2:41132/237‑1 (MQ=255) cGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCCCACCTCTTTAACCATTTCCGCCTTGAGGATTGCGCGt > 1:527684/1‑251 (MQ=255) ggCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTTCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGGATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTTGCGGCGGTAAGATAATTACCCCCGCAGGCTCACCTCTTTTACCATTTCCGCCTTGAGGATTGCGCGTAAATc > 2:76649/1‑251 (MQ=255) cgcgCTGTCGCGGGCGGTTGG‑TCTGGGCGTGTCCCAGCCGCCGTTGTTTTTGCAGTTTGCCCC‑TGAATGGTTGAAAACCCTGCTCTCCTCGGGGATCGCCGCGGGGGTTATTCCTGCCAT‑CGTGCTAAATCTGATTTCCCCCCCAAAAAAA‑CATTAATT‑CACGGGCGGCGGTAAAAAAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCtt < 1:177833/251‑1 (MQ=255) gTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGGCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTTTGTGc > 2:79075/1‑251 (MQ=255) gtGGCGTTTGG‑TCTGGGCGTGTCTCAGCACCCGCTGATTTTGAGGTTTGCCCG‑TGAATGGCTAAAAACCCTCCTCCCCCCCGGGACCGCCGCGGGCGGTATTCCTGCCAT‑CGTGCTGAATCTGTTTTCCCCCCCAAAAAAA‑CAGTAATT‑CACGGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCAttt < 1:79075/250‑1 (MQ=255) gtgggctttcctcAGCGGCCGCTGTTTTTGCAGTTTCCCCC‑TGATTGGCTAAAACCCCTCCTCTCCTCCGGGCCCCCCGCGGGGGTTATTCCTCCCTT‑CGTCCTGAATCTGTTTTCCCCCCCAAAAAAA‑CAGTAATT‑CCCTGGCGGCGTAAAGATATTTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGaa < 1:157273/241‑1 (MQ=255) tcAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAAt > 2:78102/1‑251 (MQ=255) cccgcacccgtgaaTTTTGAATTTTGCCCC‑TGAATGGTTAAAAACCCTGCTCTCCCCGGGGATCGCCGCGGGGGGTATTACTGCCAT‑CGTGCTGAATCTAATTTCCCCCCCAAAAAAA‑CAGAAATT‑CACGGGCGGCGGTAAGATAATTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAAt < 1:403492/238‑1 (MQ=255) cGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACCGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTggg > 1:286857/1‑251 (MQ=255) tGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCtt > 1:468763/1‑251 (MQ=255) gCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTtc > 1:206028/1‑251 (MQ=255) ggCTGAAAACCCTGCTCCCCCCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATTTGATTTTCCCACCAAAAAAA‑CAGTAATT‑CCCTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGc < 1:148905/250‑1 (MQ=255) ggCTAAAAACCCTGCTCCCCCCGGGGATCGCCGCGGGCGGTTTTACCGCCAT‑CGTGCTAAATCTGTTTTTCCCCCAAAAAAAA‑CAGTATTT‑CTCTGGCGGCGGTAAGAAATTTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGTAAGCTGCTTCTCTACATTCTCATCGct < 1:196497/251‑1 (MQ=255) gAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGt > 2:373042/1‑251 (MQ=255) aaaaccctcctctcccccggtgccgccggGGGCGTTATT‑CTGCCATTCGGGCTGAATCGGATTTTCCCACCAAAAAAA‑CAGTATTT‑CCCTGGCGGCGGTAAAATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTGTTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGtt < 1:298787/228‑1 (MQ=255) aCCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGACAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTg > 2:162617/1‑251 (MQ=255) ccccccGGGATCGCCGGGGGCGGTATTCCTCCCTT‑GGTGCTGAATTTGTTTTCCCCCCCAAAAAAA‑CAGTAATT‑CACTGGGGGCGGAAAGATAATTCCCGCCGCAGTCTCCCCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGc < 1:556770/247‑1 (MQ=255) ctccGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTg > 1:539201/1‑251 (MQ=255) ccgggtccgccggGGGCGGTTTTCCTGCCAT‑CTTGCTAAATCTGATTTCCCCCCCAAAAAAA‑CATTAATT‑CCCTGGCGGGGGTAAAATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGc < 1:252074/244‑1 (MQ=255) ccGGGATCGCCGGGGGCGTTATTACTGCCAT‑CGTGCTGAATCTGTTTTTCCCACCAGAAAAC‑CAGTAATT‑CACTGGCGGCGGTAAAATAATTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGc < 1:172320/251‑1 (MQ=255) ggaccgccggGGGCGTTATTACTGCCAT‑CGGGCTGAATCTGATTTCCCCCCAAGAAAAA‑AAGTATTT‑CACTGGCGGGGGTAAGAAAATTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCctc < 1:471137/247‑1 (MQ=255) ggATCGCCGCGGGCGGTATTCCTCCCTT‑CATTGGAAATGTGATTTCCCCCCCAGAAAAC‑CA‑TAATTTCTCGGGCGGCGGAAAGATAATTACCGCCGCAGTCTCCCCTCTTTAACCATGCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCctc < 1:198550/251‑1 (MQ=255) cgccgcGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTAtt > 1:552069/1‑251 (MQ=255) ggcggTATTACTGCCTT‑CTGGCTGAATCTG‑TTTTCCCCCCAAAAAAAACAGTAATT‑CCCTGGGGGGGGAAAGATAATTCCCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTtcttct < 1:201276/251‑1 (MQ=255) gTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTCTGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCa > 2:410269/1‑250 (MQ=255) ttACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAAcc > 2:62167/1‑251 (MQ=255) gcccAT‑GGTGCTAAATCTTATTTCCCCACCAAAAAAA‑CAGTATTC‑CACGGGCGGCGTTAAGATATTTCCCGCCGCAGTCTCACCTCTTTACCCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCt < 1:172668/249‑1 (MQ=255) gCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTg > 2:452880/1‑251 (MQ=255) cggtgttaattcttttttccccACCAAAAACA‑CATTATTT‑CACTGGCGCGGGTAAGATAATTCCCGCCGTAGCCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGa < 1:39330/232‑1 (MQ=255) aTTTTCCCCCCAGAAAAA‑CAGTAATT‑CACTGGCCGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTTGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGAGCAGAACATATc > 2:190551/1‑249 (MQ=255) | ACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGG‑TCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCC‑TGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCAT‑CGTGCTGAATCTGATTTTCCCACCAGAAAAA‑CAGTAATT‑CACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGAGCAGAACATATC > NC_000913/3830075‑3830561 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |