| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,554,000 | 0 | T | G | 35.2% | 64.1 / 10.2 | 54 | Y557S (TAC→TCC) | maeA | malate dehydrogenase (oxaloacetate‑decarboxylating) |
| Reads supporting (aligned to +/- strand): ref base T (12/23); new base G (19/0); total (31/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.03e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGCAGGGCTTCGCCATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGCGCCGGAAGCAAT > NC_000913/1553753‑1554247 | agcagGGCTTCGCCATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTAtt < 2:228843/251‑1 (MQ=255) cagGGCTTCGCCATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCg < 1:407018/251‑1 (MQ=255) gCCATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGcc > 1:551413/1‑249 (MQ=255) ccATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTTGGCTTGcccg > 2:98331/1‑248 (MQ=255) gTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTc < 1:98331/251‑1 (MQ=255) aaggatcatcatgaCATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTTCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAgg > 1:295582/14‑251 (MQ=255) taCGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGGTTGCCAGAAATTAT‑CGTCAA‑TTGCCTGTTTCAggg > 1:427740/1‑251 (MQ=255) gTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGGCGCGGGATTCGGCTTGCCAGAAATTAT‑CGACAA‑TGGCCTGTTGCAGGGCtt > 1:513864/1‑251 (MQ=255) gTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGTCGCGGGATTCGGGTTGCCCGAAATTAT‑CGGCAA‑TGGCCTGTTGGAGGGGTTCggtg > 2:21980/1‑249 (MQ=255) aaCATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCATTTTCGGATGATGTTCTGCCTAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCCCGGGCTTTGGCTTGACAGAAATTAT‑AGTCAA‑TGGCCCGGTGCAGGGCtttgggaggg > 1:276668/1‑243 (MQ=255) atgatCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTc < 1:410278/251‑1 (MQ=255) aacaacTGCAGCCTTCATAGTTCCTCCTTTTCGGATGCTGTTCTGCATAGCAGGTGACGCAAATGAGATTTATGCGCCACTACCCAGTATGGATGAGATCTGAAACAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTAGCGGGCGCAGGCTTAGATGGAGGTACGGCGGCTGTCGCGGGATTCCGCGTGCCGGAAAAAAT‑CGCCAA‑TGGGCTTGTGGAGGGCTTCGGGAGAGGTTTTCAccgccccgccg > 1:141576/1‑250 (MQ=255) aacaacGGCAGCCTTCATAGTCCCCCCTTTCGGGATGATGTTCGGAAGAGAGGGTGAGGCAAAGGAGATTTATTCGCCACTACCCAGTATGGATGAGATCGGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTCCACCGCCACGCCt < 2:551413/251‑1 (MQ=255) aacTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGGGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCACCGCCACGCCTtgc < 1:69676/251‑1 (MQ=255) acTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCAAAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCGAAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGGGGTACGGGGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTGGCAGGGTTTCGGCAGAGTTTTTCACCGCCACGCCTtgct < 1:208383/251‑1 (MQ=255) tCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCCGCTTGCCAGAAATTAT‑CGTCAA‑AGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTTTCCGCCCCGCCTTGCTGCTGCGccct > 1:544064/1‑249 (MQ=255) tAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCACGCCTTTCTGCTGCGCCAtttt > 1:426995/1‑251 (MQ=255) ggATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGAAGTCGCGGGCATCGGCTTGGCAGAAAATATTCTCCAA‑AGGCC‑GTTGCAGGGCTTCGGGCGAGGTTTTTACCGCCCCCCCCTGCTGCTTCGCCACTTTGCCCACCGCaacacc > 2:128143/1‑247 (MQ=255) ttCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGGCGCGGGATTTGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCCGGTGCAGGGGTTCGGCAGAGGTTTTCACCGCCCCGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑CCAATTgcgc > 2:405883/1‑251 (MQ=255) cTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGGAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTTCTGCTGCGCCCTTTTGCCAACCCCCAA‑C‑GCAATTGCGCgg > 1:554991/1‑251 (MQ=255) cTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCCCCACGCCCTGCTGCTGCGCCATTTTTCCAACCGCAAA‑C‑GCCATTGCGCgg > 1:269748/1‑251 (MQ=255) gCATAGCAGGTGAGGAAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTCCCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGcgcg < 1:528238/248‑1 (MQ=255) tGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTTGGCGTGCCAGAAATTTT‑TGGCAAATGGC‑TGTTTCAGGGGTTCGGCAGGGGGTTTTAACGCCACCCCTTGCTGCCGCGCCCTTTTTCCCACCGCAAAAC‑GAAATT‑CGCGGGGGACTTTCttg > 2:175408/1‑249 (MQ=255) tGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGTCGGGCTTTGGCAGAGGGTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTTCCAACCGCCAA‑C‑GCAATTGCGCGGGGGACTTTCTg > 1:528946/1‑250 (MQ=255) ggaaaaTGAGATTTATTCGCCACTACCAAGTATGGATGAGATCTAAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAAAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAata < 1:175408/248‑1 (MQ=255) gtagttttgtttcccatcTACCCATTATGTATGAGATTTAAAAAAGGGGGGGGGAAATAGCCCGTTAGCCTTCCCTCCCGGGCGCAGGCTTAGATGGAGGTACGGCGGAACTGGCGTTATTCGGCTTGCCAAAAATTAA‑CGTCAA‑TGGCCTGTTGCAGGGCTCCGACAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCTCAAA‑C‑GCAATTTCGCGGGAGACTTTCTGAATATCttt < 2:276668/234‑1 (MQ=255) gagaTTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCCCGCCCTGCTGCTGCGCCCTTTTTCCAACCGCCAA‑C‑GCAATTGCGCGGGGGACTTTCTGAATATCTTTc > 1:553823/1‑250 (MQ=255) tttATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCCA‑TGGCCTGGTGCAGGGCTTCGGCAGAGGGTTTTACCGCCCCGCCTTGCTGCTGCGCCCTTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGGGACTTTCTGAATATCttttcgttc > 2:155030/1‑245 (MQ=255) tgttccccgctccccAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATGGCCCGGTAGCCTTCCCTACCGGGCGCAGGCTGAGAGGGAGGTAGGGGGGTGGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGTCTTCGGCAGAGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTcc < 2:295582/238‑1 (MQ=255) aCTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTTGGCTTGCCAGAAATTAT‑CGTCAA‑TTGGCTGTTGCAGGGTTTCGGGCGAGGGTTTCACCGCCCCGCCTTTCTGCCGCGCCCTTTTTTCAACC‑CAAA‑CAGCAAATTCGCGGGGGACTTTCTGGATATTTTTctgccatacggttctg > 1:100230/1‑236 (MQ=255) cccAGTAGGGATGAAATCTGAAAAAGGGGGGGGAAAATACCCTGGTACCCTCCACTACCGGGCCCAGGCTAGGAGGGGGTTACGGCGGTAGTCGCGGTTTCCGGCTTGCCAAAAATTAT‑CGTCAA‑TGCCCTTTTGCAGGCCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCAt < 2:57775/249‑1 (MQ=255) gTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCCGAAAATAT‑TGTCCA‑TGGCCTGTTGCCGGGCTTTGGCAGAGGGTTTCACCCCCACGCCCTGCTGGTGCGCCCTTTTTCCAACCGCCAA‑C‑CCAAATGCGCGGGGGACTTTCTGGATATCTTTTAGTTCCGGCCGGACCATAccctc > 2:308736/1‑248 (MQ=255) aTGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTTCAGGGCTTCGGCAGAGGGTTTTACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAAACGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCCGTACCATACCTTCGc > 1:334950/1‑251 (MQ=255) aTGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCCATTGCGCGGGGGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGc > 1:261567/1‑251 (MQ=255) aTGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGtt < 1:272084/251‑1 (MQ=255) gAAAAAGGGAGAGGGAAAAAGCCCGGTAGCCTTCCGTCCCGGGCGCAGGCTTAGATGGAGGTACGCCGGTAGCCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTAAA‑TGGCCTGTTGCAGGGCTTCGGCATGGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCaa < 1:249995/251‑1 (MQ=255) aGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TTGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTTCCAACCCCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCCCCGTTCCGCACCAATGGTg > 1:132460/1‑251 (MQ=255) aGGGAGAGGGAAAAAGCCCGGTAGCCTTCACTACGGGGCGCAGGCTTAGATGGAGTTCGGGCGGTAGTCGCGGTATTCGGCTTGCAAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTg < 1:155030/251‑1 (MQ=255) gagaGGGAAATGCCCCGGTAGCCTTCCCTCCCGGGCGCAGTCTTAGATGGAGGTTCGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTTTTGCGGGGCTTCGGCAGAGGTTTCCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAAt < 1:339704/251‑1 (MQ=255) gggAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTAT‑CGTCAA‑AGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCCTTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTg > 1:360954/1‑251 (MQ=255) ggAAATAGCCCGGTAGCCTTCACTACCGGGCGCGGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAACGGTGAATACTgc < 1:392164/251‑1 (MQ=255) ggTAGCCTTCACTCCCGGGCGCAGGCGTAGAGGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAAAAATTAC‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGtttn < 2:261567/251‑2 (MQ=255) aGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAAACACGGTATTCGGCTTGCCAACAATTTA‑CATAAA‑AGGCCTGTTTCAAGGCATCGGCCGAGGTTTTCACCCGCACGCCTTACTGCTTCGCCCTTTTTCCAACCCCGAA‑A‑ACCATTTCGCCGGAGACGTTCTGAATATATTTCAGTTCCCGCAGTACCCTACCTTCCCCGCTCAGCACCAATTGTGTATACTGCGcccacgattccat > 1:249423/1‑240 (MQ=255) cTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCCGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCACGCCTTTCTGCTGCGCCCCTTTTCCCACCCCCAA‑C‑GCCAATGCGCGGGGGACTTTCTGAATATCTTTTCGTTCCCGCCGGACCACACCTTCCCCGTTCAGCACCCATGGTGAATAATGCGCCCGCGGTTCCCTTGc > 2:48770/1‑251 (MQ=255) ccGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGGTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTTCGCCATTTTTCCAACCGCAAA‑C‑GCAATTGCGCGGGAGGCTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCCGCACCAATGGTGAATACTGCGCCAGCGGTTCCATTGCCGACATc > 1:46543/1‑250 (MQ=255) ggCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAAAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGAAGGGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCAt < 1:78356/251‑1 (MQ=255) ggCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTTGGCTTGCCAGAAAATAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCCCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCCTACCTTCGCCGTTTCGCCCCAATGGTGAAAACTGCGCCAGCGTTTCACTTGCCGACATCAGCCTCTCAt > 2:54211/1‑251 (MQ=255) gAGGTACGGCGTTAGTCGCGGTATTCGGCTGGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACg < 1:405883/251‑1 (MQ=255) gggcggTAGTGGGGGTATTCGGCTTGCCAGAATTTAT‑CGTCAT‑GGGCCTGTTGCAGGGCTTCGGCAGAGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGAcgc < 2:554991/250‑1 (MQ=255) ggagggaGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGTGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATTCCTTCGCCGTTCAGCACCAATGGTGCATACTGCGCCAGCGTTTCACTTGCCGACAGCAGCATCTCATCTGTGATACGTGAcg > 2:152632/7‑249 (MQ=255) ggTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGCGCCg > 2:52613/1‑251 (MQ=255) gTCGCGGTTTTCGGCTACCCAGAAATTAT‑CGTAAA‑TGGCCTTTTGCAGGGTTTCGGCGGGGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGCGCCGGAAg < 2:269748/251‑1 (MQ=255) ccgcgGTATTCGGCTTGCCAGAAATTGT‑CGTCAA‑TGCCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGCGCCGGAAGc < 1:21980/250‑1 (MQ=255) ggTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACCTCAGCATCTCATCGGTGATACGTGACGCGCCGGAAGCAAt > 2:383028/1‑250 (MQ=255) | AGCAGGGCTTCGCCATGTTTCAGTGAGCGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATGTTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAT‑CGTCAA‑TGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAA‑C‑GCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCGTTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGCGCCGGAAGCAAT > NC_000913/1553753‑1554247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |