| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 343,444 | 0 | A | G | 32.2% | 108.3 / 13.3 | 59 | G187G (GGA→GGG) | yahK | aldehyde reductase, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (5/35); new base G (19/0); total (24/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGAC > NC_000913/343195‑343677 | aaaCTACTGTGATCACATGACCGGCCCCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGAc < 2:158946/251‑1 (MQ=255) gggaacacaTAACCGGCACCAAGAACTCGCCGGCGCGGGACGAACCGGGCCATTCTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGGGCGATATGTTCTGCGTAGTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTAGTCGCCGCTACGTCACTGGCAGGCCGGGGCGGGTAAAAAAGTGGGCGTGGTCGGCATTGGCGGTCAGGGACATAT‑ggg < 2:470224/245‑1 (MQ=255) tgATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑ggggg > 1:90466/1‑250 (MQ=255) gATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGaaaaattggggt > 1:47844/1‑240 (MQ=255) aTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGCCTGGGGGATAT‑GGGGGTTAAGcg > 1:156539/1‑250 (MQ=255) gACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑g < 2:474591/250‑1 (MQ=255) aaCTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATgg < 1:100062/250‑1 (MQ=255) gACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCCGGGGCACAT‑GGGGTGTTAGCC‑GGGCCACGCG‑CTGGGGGgacacg > 2:28287/1‑249 (MQ=255) cGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATgtggtg < 1:361894/251‑1 (MQ=255) ccGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGGATAT‑GGGGGTTAAGCT‑GGGCCACGCG‑ATGGGGGGACATGTGGTGGCATTTa > 1:185127/1‑250 (MQ=255) cGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGGTTAAGCT‑GGCCCCCGCG‑ATGGGGGCACATGTGGGGGCATTTAcc > 1:411135/1‑251 (MQ=255) aTACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGATTAAGGT‑GGGCCCCGCG‑ATGGGGGGACATGTGGGGGGATTTACCACTTCt > 1:487874/1‑251 (MQ=255) aTACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCt < 1:338111/251‑1 (MQ=255) aTACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGGGTAT‑GGGGGGTAAACT‑GGCCCCCGCG‑ATGGGGGcgcacggtgtgtgggtttacactttt > 2:472551/1‑226 (MQ=255) aCTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTg < 1:75933/250‑1 (MQ=255) ggcggcTACTCACACCAGATCGTCGTTCAGTAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCCCTTCTG‑AGGCaaa < 2:404877/251‑1 (MQ=255) gggtACTCTCAACAGATGGTCGTTCATGAGCGATATGTTCGGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACTCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAAcg < 2:399969/248‑1 (MQ=255) tACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGAATAT‑GGGGAGTAAACT‑GGCCCACGCG‑ATGGGGGGACATGTGGTGGCATTTTCCACTTCTT‑AGGCAAAAagcgg > 1:335632/1‑250 (MQ=255) aCTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGaa < 1:150445/251‑1 (MQ=255) aCTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGaa < 2:509524/251‑1 (MQ=255) ctcaccaGATCGTCGTTCATGAGCGATATGTCCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAg < 2:335632/244‑1 (MQ=255) caGATCTTCGTTCATGAGCGATATGTTCTGCGTATTCGTCCCCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑Caaa < 2:90466/251‑1 (MQ=255) gtcgtTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGGTTTAGCT‑GGGCCACGCG‑ATGGGGGGACATGTGGGGGCATTTACCACTTCTG‑AGGCAAAACGCGGAGCGG‑CAAAAGcccc > 1:223798/1‑250 (MQ=255) ggCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAt < 2:411135/250‑1 (MQ=255) aGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAt < 1:194294/251‑1 (MQ=255) aGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCAAATTGGGGGTTAGGCG‑GGCCC‑CCCGCAGGGGGGCACA‑GTGGTGGGCTTTACCCCCTCCG‑AGGCAAAAAGCGGAACGG‑GAAAAGCCCCTGGGGGcgcg > 2:72143/1‑248 (MQ=255) gTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCAc < 2:124622/161‑1 (MQ=255) ccccGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGcc < 2:164019/250‑1 (MQ=255) agcagcTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCAATT‑TGGGATTAAGCC‑GGGCCCCCCG‑ATGGGGGGCCATGTGGGGGGATTTTTCACTTTTT‑TGGCAAAAAGCGACGCGG‑GAAAAGCCCCTGGGGGCGCGAT‑‑AGGTT‑TTAAATCACGCAATGGCGAGGAGATg > 2:362700/1‑251 (MQ=255) cagcTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑Tgg < 1:164196/208‑1 (MQ=255) agcTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATggcg < 1:423793/251‑1 (MQ=255) gcTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATggcgg < 1:256353/251‑1 (MQ=255) tGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTTGGGCATTT‑GGGGGTTTAGCTTGGCCCAC‑CG‑GTTGGGGGACATGTGGGGGGATTTTCCCCTTCTG‑AGGGAAAAAGCGGAACGG‑GACAAACCC‑CGGGGGG‑CGATTAAAGTTTTTAACTC‑CGCAAAGCCGGTgagggtgcgggc > 2:149254/1‑242 (MQ=255) cggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACTTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCAt < 1:500040/251‑1 (MQ=255) ggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTTGGGCAAAT‑GGGGGTTAAACT‑GGGCCACCCG‑GTGGGGGCACACGGGGTGGGATTTTACACCTCTGCGGGCAAAACGCGA‑GCGGGAAAAAGCCC‑‑GGGGGG‑CGGT‑GAAGTTGGTAACTCAACCAATGCCGATgaggaggggggccctc > 2:357788/1‑238 (MQ=255) ggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATc < 2:547148/251‑1 (MQ=255) ggCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGGGTTAGGT‑GGCCCCCGCG‑GTTGGGGCACATGTGGGGGCATTTTACACCTTTG‑GGGCAAAAAGCCAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGGT‑GAAGGTGTTAACTCACGCCATGCCGagtagaagggggcgccaccca > 2:320533/1‑228 (MQ=255) ccTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGttt < 1:412552/251‑1 (MQ=255) ccTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGt < 1:362700/249‑1 (MQ=255) ttgttgTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTc < 2:185127/249‑1 (MQ=255) tgttgtGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGGTTAAGCT‑GGCCCCCGCG‑ATGGGGGGACATGTGGTGGGATTTACCACTTCTG‑AGGGAAAAAGAGAAGCGG‑GAAAAAGCC‑TGGGGGC‑CGGA‑GAAGTTGTTAAATCCAGCAAAGCCGATGAGGTGGGGGGGCCTTTGAAGAGTTTCGAt > 1:113827/1‑251 (MQ=255) gtgtgCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCa < 1:548725/251‑1 (MQ=255) gCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAttt < 1:382977/250‑1 (MQ=255) gggATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGGAAAAAGCGAAGCGG‑CAAAAACCC‑TGGGGGC‑CGGT‑GAAATTGTTTACTCACGCAATGGCGATGAGGTGGCGGCTCATTTGAAAAGTTTCGATTTCAttttta > 1:276553/1‑248 (MQ=255) aTCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAA‑GGGGAATAAGGT‑GGGCCACGCG‑ATGGGGGCACATGTGGTGGCATTTTCCACTTCTG‑AGGGAAAACGCGAAGAGG‑GAAAAACCC‑TGGGGGC‑CGAT‑GAAGTTGTTAAATCACGCAATGCCGGTGAGGTGGGGGGTCATTTGAAGAGGTTCGATTTCATTTTGAATa > 1:118012/1‑250 (MQ=255) gTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGGCATAT‑GGGGGGTAAGCT‑GGGCCACGCG‑ATGGGGGGACATGTGGGGGGATTTACCACCTCTG‑CGGCAAAACACGAAGCGG‑CAAAAAACC‑TGGGGGG‑CGGG‑GAAGTTGGTTACCCACGCACAGCCGATGAGAGGGGGGGCCATTTGACGAGTTTTGCTTTCTTTTTTTATAAAGTAGCTg > 2:435380/1‑251 (MQ=255) ttCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTTGGCATCGGCGGTCTGGGGCATAT‑GGGGATTAAGCT‑GGCCCACGCG‑GTGGGGGCCCATGTGGGGGCATTTACCCCTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGGTGTTAACTCACGCAACGCCGAAGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTgcgc > 1:187505/1‑251 (MQ=255) gccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGAGTTAGCT‑GGCCCACGCG‑ATGGGGGGACATGTGGTGGCATTTTCCCCTTCTG‑GGGCAAAAAGCGAAGCGG‑CAAAAGCCC‑CGGGGGG‑CGAT‑GAAGTTGTTAACTCACGCCATGCCGATGAGGTGGCGGCTCATCTGAAGAGTTTCGattttattttttataaagtaacgtcgccac > 2:147618/1‑231 (MQ=255) cgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACAt < 2:156539/251‑1 (MQ=255) gcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCGGGGGAATAT‑GGGGGATAAGGT‑GGCCCACGCG‑GTGGGGGGCCATGTTGCTGCATTTACCACCTCTG‑AGGCAAAACGCGAAGCGG‑GCAAAGACC‑TGGGGGA‑CGAT‑GAAGGTGGTAACTCACGCAAAGCCGAGGAGGTGGCGGCTCATCTGAAACGGTTCGCTTTCATTTTGAAAACAAGAGCTGCGCCCCAt > 2:368100/1‑250 (MQ=255) aCTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTcgac < 1:72143/251‑1 (MQ=255) cTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCCTTTTCCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑CGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCCTCTGAAGAGTTTCGATTTTATTTTTAATACAGTAGCt > 2:367384/1‑232 (MQ=255) cTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCt < 1:367384/232‑1 (MQ=255) gCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGAtt < 2:194387/251‑1 (MQ=255) ggccgggccgGGTAAAAAAGTGGGCGTGGTCGGCATCGGCAGTCTGGGACATAT‑GGTGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGAttttn < 2:260997/251‑2 (MQ=255) gccgggccggGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTac < 2:487874/251‑1 (MQ=255) cgggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGGCATAT‑GGGGGTTAAGCT‑GGGCCACGCG‑ATGGGGGCACATGTGGGGGGATTTTCCACTTCTG‑GGGCAAAAAGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGGTGTTAACTCACGCAATGCCCATGAGATGGCGGCTCATCCGAAGAGTTTTGATTTCATTTTTAAAACAGTAGGTGCGCCACATAATCTCGACGATTTTacc > 2:533021/1‑250 (MQ=255) ggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAAAGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCCTCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTaccacc > 1:522698/1‑251 (MQ=255) ggCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATgg < 1:472551/251‑1 (MQ=255) ggCATCGGCGGTCTGGAACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGAc < 1:371888/251‑1 (MQ=255) | AAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATAT‑GGGGATTAAGCT‑GGCCCACGCG‑ATGGGGGCACATGTGGTGGCATTTACCACTTCTG‑AGGCAAAACGCGAAGCGG‑CAAAAGCCC‑TGGGGGC‑CGAT‑GAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGAC > NC_000913/343195‑343677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |