| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,429,990 | 0 | A | T | 26.9% | 88.4 / 15.4 | 52 | M43L (ATG→TTG) | cycA | D‑serine/alanine/glycine/:H(+)symporter |
| Reads supporting (aligned to +/- strand): ref base A (12/26); new base T (14/0); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGT > NC_000913/4429744‑4430222 | gTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGAACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTTGTACGGGGTTGTTTTT‑ggg > 1:406168/1‑251 (MQ=255) aTCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTGAGGGGTTGTTTATTGGGGTcgg > 1:492325/1‑249 (MQ=255) ttGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGGAAGGGGTTGTTTTT‑GGGGTCTGGCAAAACGAtt > 1:148460/1‑251 (MQ=255) ttACCTAATATCGCTGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACACCACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTACGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTATGGGGGTTTTTTT‑GGGGTCTGTCAAACAGATTAGc > 2:500374/1‑251 (MQ=255) aaTAGCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGc < 1:500374/250‑1 (MQ=255) cGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGcc < 2:56607/251‑1 (MQ=255) cGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGCCATTTGTACGGGGGTGTTTTT‑TGGGTGTTGCAAAACGGTTAGCCTTTCC‑ggggc > 2:345576/1‑249 (MQ=255) gATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGCCATTGGTACGGGGGGGTTTAT‑GGGGGCTGGGAAAACCATTAGCCTTGCC‑ggggcg > 1:253451/1‑248 (MQ=255) cGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCAtt < 2:321311/251‑1 (MQ=255) gATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCAttt < 1:182152/251‑1 (MQ=255) tcgtcgTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTGtat < 2:47972/250‑1 (MQ=255) aTAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTTGTACGGGGGTGTTTTT‑TGGGTCTGGCAAAACGATTAGCCTTTCC‑GGGCCGTCg > 1:243034/1‑225 (MQ=255) aTAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCg < 2:243034/225‑1 (MQ=255) tAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGGAAGGGGGTGTTTTT‑GGGGTCTGGGCAAACGAGTAGACTTTCC‑GGGCCGGCGGTTCTTTTTGTTTTTATTATCATTTGGttttttctc > 2:107177/1‑246 (MQ=255) aaaGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGGAAGGGGGTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGGTCATTTTCGTTTATATGATCATT‑TGTTTTTTGctct > 1:35172/1‑251 (MQ=255) gTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCAtt < 2:434773/213‑1 (MQ=255) gTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTTT‑GGGGGCTGGCAAAACGATTAGCCTTTCC‑GGGCCGTCGATCAtt > 1:434773/1‑213 (MQ=255) tGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTTT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATgacgtcgtcaattggggtgc > 1:199530/1‑232 (MQ=255) gAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGGTGTTTAT‑GGGGTGTGGCCAAACGATTAGCCCTGCC‑GGGCCGGCGACTACTTTTGTTTTTATGAGTATT‑TGTTTTTTTCTCTTTTTTGTGAttcgtgc > 2:454207/1‑245 (MQ=255) gAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGAGCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGc < 1:501663/251‑1 (MQ=255) aacaacACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGGTGTTTTT‑GGGGGCTTGCAAAACGATTAGCCTTGCC‑GGGCCGTCGGTCCTTTTCGTTTATATGGTCATT‑GGTTTTATGCTCTTTTTTGTGATG‑GGGGc > 1:245039/1‑250 (MQ=255) agacagGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGGACGGGGGTGTTTAT‑TGGGTGTGGCAAAACGATTAGCCTTGCC‑GGGCCGGTGATCATTTTCGTTTATATGAACATT‑GGGTTTATGCTCTTTTTTGTGATG‑Cgggtcatgtgggg > 2:80514/1‑241 (MQ=255) aagaaAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTc < 2:80105/250‑1 (MQ=255) aagaaAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTAT‑GGGGGCTGGCAAAACGATTAGCCTTGCC‑GGGCCGGCGATCATTTTCGGTTATATGATCATT‑GGTTTTATGCTCTTTTTTGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTcc > 1:80105/1‑250 (MQ=255) aaaaaaaCATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAAt < 1:24529/251‑1 (MQ=255) aaaaaaaCATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTAT‑GGGGGCTGGCAAAACGATTAGGCTTGCC‑GGGCCGTCGATCCTTTTCGTTTATATGATCATT‑GGGTTTTTTCTCTTTTTCGTGATT‑CGGGCAATGGGGGAATTGCTTCTTTCGAAt > 1:16473/1‑251 (MQ=255) naaaaaCATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTTT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGGCGTCGATCATTTTCGTTTTTATTATCATT‑GGTTTTATGATCTTTTTTGTGATG‑CGGGCAATGGGGGGATTGGTGTTTTTGAAtt > 2:274995/2‑250 (MQ=255) aaaaaCATGGTAGATCAGGTAAAAGTCGTTGCCGGTGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCt < 2:57128/251‑1 (MQ=255) aTGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATa < 1:578520/251‑1 (MQ=255) tGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGTTGTTTTT‑GGGGGCTCGCCAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATAATT‑GGTTTTATGGTCTTTTTCGTGTTG‑CGGGCAATGGGGGGATTGCTGCTTTc > 1:503331/1‑238 (MQ=255) tGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTc < 2:503331/238‑1 (MQ=255) tAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGGTGTTTTT‑TGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGGCGTCGGTCATTTTTGTTTTTATGATCCTT‑GGGTTTTTTCTCTTTTTTGTGATG‑CGGGGAATGGGGGGATTGCTGCTTTCTAATCTTGAATaaaa > 2:533202/1‑247 (MQ=255) aGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGTGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGAt < 2:535079/162‑1 (MQ=255) ggTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTAT‑GGGGGCTGGCAAAACGGTTAGCCTTGCC‑GGGCCGGCGATCATTTTCGTTTTTATGATCATT‑GGGTTTTTGGTCTTTTTTGTGATG‑CGGGGAATGGGGGGATTGCTGCTTTCGAATCTGGAATAAAAATCttttt > 2:451434/1‑250 (MQ=255) aaGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGaa < 1:296223/212‑1 (MQ=255) gTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGTTGTTTTT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGGTTATATGATCCTT‑GGGTTTTTGCTCTTTTTTGTGATT‑CGGGCAATTGGGGGATTGCTGCTTTTGAATCTGGAATTCAAATCTTTTAGTGACtt > 1:80239/1‑251 (MQ=255) gTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACtt < 1:345576/251‑1 (MQ=255) gTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACtt < 1:533202/251‑1 (MQ=255) gTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTAT‑GGGGTCTTGCAAAACGAGTAGCCTTGCC‑GGGCCGTCGATCATTTTTGTTTATATGATCATT‑GGTTTTATTCTCTTTTTTGTGATT‑CGGGCAATGGGGGGATTTCTGGTTTCGCATCTGGAATACAAAACTTTTAGTGACTTCGc > 1:122362/1‑251 (MQ=255) ggCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGCAATATTCAGCTTATTGCCATTGTCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCt < 2:541664/249‑1 (MQ=255) ccGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGt < 2:193511/184‑1 (MQ=255) cGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGTTGTTTAT‑GGGGGCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTTGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑Cgg > 1:472825/1‑190 (MQ=255) cGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑Cgg < 2:472825/190‑1 (MQ=255) atgatCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGGGCCATTGGTAAGGGGGTGTTTTT‑TGGGTTTGGCAAAAAGATTAGACTTGCCCGGGCGGCCCCT‑ATTTTTCTTTTTTTGATTCTT‑GGTTTTTTGCTCTTTTTTGGGGTGGCGGG‑AATTGGGGGATTTCTGCTTTTGGATCTTGAATACAAATCTTTTTTTGACTTCACTTCCGAt > 2:531643/1‑251 (MQ=255) atCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCCTTGGTACGGGGGTGTTTAT‑GGGGTCTGGCAAAAAGATTAGCCTTTCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCCATGGGGGAATTTCTGCTTTTTGATCTGGGATAAAAATCTTTTAGTGACTTCGCTTCCGCtttt > 2:558478/1‑250 (MQ=255) ggCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTTCCATTGGCGGTGCCATGTGTACGGGGTTGTTTAT‑GGGGTCTTGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGt < 2:406168/251‑1 (MQ=255) cGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCAc < 2:253451/251‑1 (MQ=255) cATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGGTGTTTAT‑GGGGGCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATATGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTTACCGGCTGGACTTACTGGTTctg > 1:14014/1‑251 (MQ=255) gCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCgg < 1:451434/251‑1 (MQ=255) cATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGAGCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTGCCGATTTCCTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTa < 2:148460/251‑1 (MQ=255) ccATTGGGACGGGTTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCATCGATCATTTTCGTTTAGATGATCATT‑GGTTTTATGCTCTTTTTCGTGATT‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTGACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGGCgtg < 2:168543/251‑1 (MQ=255) aTTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACgtggt < 1:367509/251‑1 (MQ=255) | GTATTCATCCCGCGTATTGTTACCTAATATCGATGAGTCCCGATACAGATTCGTCGTATCATAGACTGACTAAAGGCCGTAGAGCCTGAACAACACAGACAGGTACAGGAAGAAAAAAACATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTAT‑GGGGTCTGGCAAAACGATTAGCCTTGCC‑GGGCCGTCGATCATTTTCGTTTATATGATCATT‑GGTTTTATGCTCTTTTTCGTGATG‑CGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGT > NC_000913/4429744‑4430222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |