| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,589,075 | 0 | A | C | 32.0% | 87.2 / 10.7 | 50 | G309G (GGT→GGG) | ydeT | fimbrial usher domain‑containing protein YdeT |
| Reads supporting (aligned to +/- strand): ref base A (17/17); new base C (0/16); total (17/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.91e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TATTGTATTTCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATC > NC_000913/1588827‑1589311 | tATTGTATTTCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTAc < 1:209127/250‑1 (MQ=255) aTTGTATTTCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTAcc < 1:123185/250‑1 (MQ=255) tGTATTTCATAATCTATTGTTCCTTAGCGACAGATTGCTATCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAAGTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCGGTCATTTTTATTCTCTCCGTT‑TGTGACAATTGCACCGAATGGTACGCTCTTATTACCGt < 2:511013/250‑1 (MQ=255) aTTTCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACt < 1:401937/250‑1 (MQ=255) tCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCa > 2:511268/1‑250 (MQ=255) cATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAAc > 1:187063/1‑251 (MQ=255) ttCCTTAGCGACGTATTTCTGTCTTGTGTTTTAGTAAGGTACCAGATGAAACTTGAGGATACTTGTTCTTGCAAATTCCGTTTTAGGTTTTATCTTTGCCCCATGAACCC‑TATAATTGCCCTGACTGTGGAATTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTGTATTCTCTCCGTG‑TGTGACATTTGCACCGACTGGAACGCTCTTATTACCTTATCTCAACGTCaggaatac < 2:183364/250‑8 (MQ=255) ttCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTc > 1:362571/1‑242 (MQ=255) ttCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTc < 2:362571/242‑1 (MQ=255) tCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACtt > 2:333098/1‑251 (MQ=255) aGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCACATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCccg > 1:298837/1‑251 (MQ=255) gACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCccgccg > 1:423102/1‑251 (MQ=255) gTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGAAAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTCCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGCCCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTTTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCAtt < 2:103658/251‑1 (MQ=255) cgggTTCAGTAAGGCTCCATGAGAAACTTCAGGAAGCTGGTCCTCAACAATACATTTTGGGTTTTTTTCTTTGCCCCATGAAACT‑TGTAATTCCCCGGACTGTGGAAGTCCAGTCAGATAAACCTGACCTTTTTCCGCGAAAATGCTGCCATTTTTATTCTCTCCGTG‑TGTAACAATTGCCCAGAATGGACCGTTTTTATTACCGTACTTCAACGTCTTTAATTTTTTCCCGCCGATTTGTGCATTAAATg < 1:268654/249‑1 (MQ=255) ggTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGAAACGCTCTTATTCCCGTTCTTAAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGtt < 1:276171/251‑1 (MQ=255) ggTTCAGTAAGGTACCAGGAGAAACTTCAGAAAGCTTGTACTCGAAAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAATCCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCTTT‑TGTGACAATTCCACCGATTGGAACGCTCTTATTCCCTTCCTTCAACTTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGt < 1:216744/250‑1 (MQ=255) cAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATATACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGACCGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGctc < 1:247621/251‑1 (MQ=255) cAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGc > 1:14174/1‑250 (MQ=255) aGGAGAAACTTCAGGAAGTTTGTACTCGACAATCCATTTTGATTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGCCTGTGGAAGTCCAGTCAGATAAACCGGACCATTTTCCGCGACAATGCTGCCTTTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAAGGGAACGCTCTTATTCCCGTACTTCAACGTCATAAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCAc < 1:490574/251‑1 (MQ=255) aaGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATg > 1:316955/1‑250 (MQ=255) ttGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGt > 1:314562/1‑251 (MQ=255) cGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAACCC‑TTAAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTCCCCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCCCCGAATGGACCGCTTTTATTCCCGTCCTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCAc < 1:333098/250‑1 (MQ=255) aCAATCCAGTTTGAGTTTTTATCTTTGCCCCATGAACCC‑TGTAATTGCCCTGACTGTGGAAGACCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAAAGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGTCAATAGCACCGTTAGTTGGGATGACAGTGACCACGGt > 2:445859/1‑251 (MQ=255) aTACTGTTTGATTTTTTATCTTCCCCCCA‑GAAACCCTGTAATGGCCCTGACTGGGGAAGCCCAGTCAGATAACCCTGCCCTTTTCCCGAGACAATGCTCCCATTTTTTTTCTCTCCGTG‑TGTTACAATTGCACCGAATGGACCGCTTTTATTCCCGTACTTCAACTTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc < 2:314562/251‑1 (MQ=255) tgattttttATCTTTGCCCCATAAACCC‑TGTAATTGCCCTGACTGTGGAATACCAGTCAGATAACCCTGCCCATTTCCCGCGACAATGCTGCAATTTTTATCCTCTCCGTG‑TGTGACAATTGCCCCAAATGGAACGCTCTTATTCCCTTACTTCAACGTCATTAATGCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGt < 1:451555/246‑1 (MQ=255) aGTTTTTATCTTTGCCCCATGAACCC‑TGTAATTCCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGGGACAATTGCACCGAATGGAACGCTCTTATTACCGTCCTTCAACGTCATTAATCCTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCa < 1:34276/251‑1 (MQ=255) cccataTGAACCC‑TGTAATTTCCCTGACTGTGAAAGCCCATTCAAATAACCCTGCCCATTTACCGCGACAATTCTGCCATTTTTATTCTCCCCGTG‑TTTGAAAATTGCCCCAAATGAACCGCTCTTTTTCCCTTCTTTAAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa < 2:298837/246‑1 (MQ=255) cATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAggg > 2:454385/1‑250 (MQ=255) aTGAACCC‑TTTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAACCCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGACCGCTTTTATTCCCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGaa < 2:187063/251‑1 (MQ=255) gAAACC‑TGTACTTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAtt > 2:468833/1‑251 (MQ=255) gagacttgttatcgccttGACTTTGGAAGTCCACTCAAATACACCCAACCATTTGCCCCGACAAACCCCCCATTTTTTTTC‑CTCCGGGCTGTGACATTTACACCGGATGGCACGCTCTTTTTCCGGTACATCAACGTCAATAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCTCCGTGAGTTGGGATGACAGTGACCACGGTTGCATCCAGTTCACCATTATCTGCAAGGGAAt < 2:148730/233‑1 (MQ=255) tGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGtt > 1:529395/1‑251 (MQ=255) ccccTGACTGGGGAAGTCCAGTCAGAAAAACCGGCCCATTTTCCGCGACAATGCTGCAATTTTTATTCTCTCCGTG‑TGTGACAATGGCACCGAATGAAACGCTCTTATTACCTTCCTTCAACTTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCa < 1:511268/250‑1 (MQ=255) gACTGTGGAAGTCCAGTCAGATAACCCTGACCTTTTTCCGCGACAATGCTGCCTTTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg < 1:274823/251‑1 (MQ=255) gACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg > 1:130989/1‑251 (MQ=255) ggggAAGTCCATGCAGATAACCCTGACCTTTTTCCGCGAAAATGCTGCCATTTTTTTTCTCTCCGGG‑TGTAACAATTGCACCGAATGGACCGCTCTTATTACCGTACTTCAACGTAATAAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACggn < 2:267651/247‑2 (MQ=255) ggggAAGTCCAGGCAGATAACCCGGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCCCCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGttt < 1:454385/249‑1 (MQ=255) cggTCAGATAACCCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCCCCGTG‑TGTGACAATTGCCCCGAATGGAACGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTatat < 1:316279/249‑1 (MQ=255) tAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCa > 2:203599/1‑175 (MQ=255) tAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCa < 1:203599/175‑1 (MQ=255) ttttCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAata < 1:584398/250‑1 (MQ=255) tCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATgg < 1:114901/250‑1 (MQ=255) gcgACAATGCTGCAATTTTTATCCCCTCCGTG‑TGTGACAATTGCACCGAATGGACCGCTCTTATTCCCGTCCTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATa < 1:468833/251‑1 (MQ=255) caCAAGGCTCCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCCCCGAATAGAACGCTCTTTTTCCCGTACTTCAACGTCATTAATTCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGc < 2:423102/250‑1 (MQ=255) cAATGCTCCCATTTTTATTCTCGCCGTG‑TGTGACAATCGCACCGAATGGAACGTTCTTATTACCGTTCTTCAACGTCTTTAATTCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCa < 1:97842/251‑1 (MQ=255) aaTGCTTCTATTTTTATTCTCCCCGTG‑TGTGACAATTGCACCGAAGGGAACCCTTTTATTACCGTACTTCAACGTCATTAATATTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAAAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCAc < 2:529395/251‑1 (MQ=255) aaTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTctct > 1:330761/1‑250 (MQ=255) gCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTAtttt > 1:29097/1‑251 (MQ=255) ggaccGCTCTTATTCCCTTGCTTCAACGTCATTAATATTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATc < 1:458531/247‑1 (MQ=255) ggaccGCTCTTATTCCCGTACTTCAACTTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTAt < 1:547117/246‑1 (MQ=255) | TATTGTATTTCATAATCTATTGTTCCTTAGCGACAGATTGCTGTCTGCTGGTTCAGTAAGGTACCAGGAGAAACTTCAGGAAGCTTGTACTCGACAATACAGTTTGAGTTTTTATCTTTGCCCCATGAAACC‑TGTAATTGCCCTGACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTG‑TGTGACAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATC > NC_000913/1588827‑1589311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |