| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 37.2% | 58.2 / 13.9 | 43 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| Reads supporting (aligned to +/- strand): ref base C (3/24); new base T (16/0); total (19/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.65e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATC > NC_000913/4604098‑4604589 | aTAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttttt > 2:154681/1‑251 (MQ=255) aaaTAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAttttttttttttt > 1:494486/1‑250 (MQ=255) aGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGcc < 1:500423/251‑1 (MQ=255) aGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGc < 1:16745/250‑1 (MQ=255) acttaacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AGGTGAGCGCagaga < 2:424749/251‑1 (MQ=255) gCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATc < 1:482290/251‑1 (MQ=255) tCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑g < 2:336166/250‑1 (MQ=255) aGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAG‑AAGGGGGGGCAGAGGGGGGATT‑TCTT‑TCCTGACTGAAATgggcgtta > 2:378417/1‑244 (MQ=255) ggAACACAGCCGCATTAAGAAGAGAAATGTCGCACTAATAGACAAATGCGTCATGAGTAGTATCGGCATTGAGAGTTTATTCAGAAAGCTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGGAAG‑AAGCGCCGCGAGGG‑ATTATCTT‑TGCTGACTGAACCAGCCATTAAGtttt > 2:556383/1‑250 (MQ=255) acaGCCGACTTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGCATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACACTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTGTCAAGAG‑AAGTGAGCGCAGAGAGGG‑GTTCTTTT‑GACTGACTGAACTGGGGGTTAAATTTCcgcgg > 1:293563/1‑250 (MQ=255) ccGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTAccc < 1:31373/251‑1 (MQ=255) cGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCg < 1:300998/251‑1 (MQ=255) aaaTGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAG‑AAGTGAGCGCAGGGAGGG‑GTTATCTT‑TCCTTACTGGACTTGCGGTTAAGTTTCCGCGTACCCCGCGTTTGGtttttt > 1:233339/1‑247 (MQ=255) gCACTCAAATAAAAATGCGTCATGAGTAGTATCGGTATTGATAGTTGATTCAGAAAGGTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTGTAGTTATTGCGgatga < 2:118633/251‑1 (MQ=255) naTAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTGAG‑AAGTGAGGGCAGAGGGGG‑ATTATCTT‑TCCTGCCTGAACTGGCGGTTAAGTTTCCGCGGACCCcgcggtttgtttttgttggtgatggt > 2:288486/2‑228 (MQ=255) aGAAAAATGCGTCATGAGTATTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATAtt < 2:565161/250‑1 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATAtt < 2:627155/250‑1 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑c < 2:237651/251‑1 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑c < 2:495895/251‑1 (MQ=255) gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑Cgg < 2:591800/251‑1 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAG‑AAGTGAGCGCCGAGAGGG‑GTTATTTT‑GCCTTGCTGTACTGGCGATTAAGATTTCGCGTACCCGGCGTTTTGTTATTGCGGGTGATGATATTTAAGCT‑CGGCTggt > 2:487437/1‑249 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAg < 1:123916/147‑1 (MQ=255) agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGtt < 2:205545/250‑1 (MQ=255) gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAG‑AAGTGAGCGCAGGGAGGG‑GTTTTTTT‑GCctgactga > 2:238078/1‑175 (MQ=255) gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCctgactga < 1:238078/175‑1 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCATGAG‑AAGTGAGGGCAGGGGGGG‑GTTATCTT‑TCCTGACTGAACTGGCGGTTTAATTTCCGCGTACCCCGCGGCTAGGTTTTGAGGATGATGATATTTTAAAT‑CGGCTG‑GTTGGTTCATTGTTGccctc > 2:417966/1‑248 (MQ=255) agTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑TCCTGACTGTAATGGCGATTAAGATTTCGCGTAACCGGCGTTTTGTTATTTTGGATGATGATATTGAAGCT‑CGGGTG‑GTTGGTTCATTTTCGCCATCAcc > 1:79504/1‑251 (MQ=255) ttagtCAGAAAGTTTGCGGGTAGCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCGCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGGTCATTGt < 1:485193/234‑1 (MQ=255) tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGAG‑GAGTGAGCGCAGGGAGGG‑GGTATTTT‑TCCTGACTGAACTGGCGGTTAAGGTTTCGCGTACCCCGCGGTTAGGTTTTTCGGGTGATGATATTTAAGCT‑CGGCTg‑gttggtttttttttggcatctaccccg > 2:219527/1‑231 (MQ=255) gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGGG‑AAGGGAGCGCCGGGAGGG‑ATTATATT‑GCCTTACTGAACTGGCGATTAAGTGTCCGCGTACCCGGCGTTTAGTTTTTTGGGGTGATGATATTGAAGAT‑CGGCTG‑ATTGGTTCATTGTCGCCATCAACCCTGGACGGGGTAt > 1:335899/1‑251 (MQ=255) gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAG‑AAGTGAgc > 1:10518/1‑113 (MQ=255) gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAgc < 2:10518/113‑1 (MQ=255) ggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTaa < 1:219527/251‑1 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAG‑AAGGGAGCGCCGAGAGGG‑ATTATCTT‑TCCCTACTGAAATGGCGGTTAAGTTTCCCCCGACCCGGCGTTTTGTTATTGCGGGTGATGCTATTTAAGGT‑CGGCTG‑GTTGGTTTATTTGCGCCATCACCGCTGGGCGGGGTAATAAGTAAAACGTcca > 1:154946/1‑248 (MQ=255) aaGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTCCCTGAG‑AAGGGAGCGCAGAGAGGG‑GTTTTCTT‑GCCTGACTGAACTGGCGGTTAAGTTTCCGCGTACCCGGCGTTTAGTTATTTCGGGTGATGATATTGAAGCT‑CGGCTG‑ATTTGTTCATTGTCGCCATCCCCGCTGGGCGGTGGATTAAGTAAAGCGTCAACGcc > 1:404904/1‑250 (MQ=255) aaGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCCTTTTTTTTTTTTCTGCCCTGTG‑AAGGGAGCGCAGAGAGGG‑GTTATTTTTGCTTG‑CTGAACTTGCGATTTAGGTTTCGCCTACCCGGCGGTTAGTTTTTGCGGATGGTGGTATTGACGCT‑CGGCTGGATTG‑TTCATTGTGTCCATTACCGCCGGACGGGGGATTTAGTAAAGCGTCTACGCt > 2:26562/1‑251 (MQ=255) ccagaCCTTTACCAGTGAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGTCTGATCTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATGAAGTAAAGCGGCAACGCTGgan < 2:292283/246‑2 (MQ=255) aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAG‑GAGTGAGCGCCGAGAGGG‑ATTTTTTT‑TCCTGTCTGGACCGGCGATTAAGGTTCCGCGTACCCCGCGTTTAGTTATTGCGGGTGATGCTATTGTAGCT‑CGGGTG‑ATTGGTTTCTTGTCGCCATCACCGCCGGACGGGGTATTAAGTAAAAAGGCAACGCTGGAGAtt > 1:13041/1‑251 (MQ=255) aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAG‑AAGGGAGCGCAGAGAGGG‑GTTATTTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGGTTTGTTATTGCGGGTGATGATATTGAAGCT‑CGGCTG‑ATTGGGTCATTTTTGCCATCACCGCTGGGCGGGGGATTAAGTAAAGCGGCAAAGCTGGAGGTTTTTCATCAggg > 1:225152/1‑250 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAG‑GAGTGAGGGGAGGGAGGG‑GGTTTTTT‑GTCTGAAAGAACTGGGGATTAAGTTTCCGCGTAACCGGGGTTTTGTTTTTGAGGGTGATGGTATTGAAGGTACGG‑TG‑ATTGGGTCATTTTCGCCCTCCCCGCTGGGCGGTGGCTTAAGTAAAGGGTCAACGCCGGAGAGTTTtctttaggac > 2:74255/1‑242 (MQ=255) tCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGTCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGTAACTCTTTTTGTcn < 2:271856/250‑2 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTAc < 1:279457/251‑1 (MQ=255) cGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGcgacc < 1:378417/251‑1 (MQ=255) tGCGGCGGTCATTTTTTTTTTTTCTTCCCTGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑TCCTGACTTAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTTGTTATTGCGGGTGATGATATTTAAGCC‑CGGCTG‑ATTGGTTCATTTTCGCCATCACCGCTGGACGGGGTATTAAGTAAAGCGGCAACGCTCGAGATTTTTTATTAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGcgaccgacc > 2:368883/1‑251 (MQ=255) gcggcgGTCATTTTTTCTTTTTCTGCCATTAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGcgaccgacc < 2:494486/250‑1 (MQ=255) tttctttttctGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATc > 1:419571/1‑249 (MQ=255) | ATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAG‑AAGTGAGCGCAGAGAGGG‑ATTATCTT‑GCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCT‑CGGCTG‑ATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATC > NC_000913/4604098‑4604589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |