| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,387,686 | 0 | G | A | 31.5% | 84.4 / 16.9 | 54 | S168F (TCT→TTT) | aaeB | aromatic carboxylic acid efflux pump subunit AaeB |
| Reads supporting (aligned to +/- strand): ref base G (29/8); new base A (0/17); total (29/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.29e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGGTAATCAGCGTCAGCGATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATC > NC_000913/3387437‑3387925 | tGGGTAATCAGCGTCAGCGATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGgag < 1:620342/250‑1 (MQ=255) gggTAATCAGCGTCAGCGATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGgaga > 1:518924/1‑250 (MQ=255) tAATCAGCGTCAGCGATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGaaa > 2:43247/1‑249 (MQ=255) cgATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGcc > 1:116732/1‑250 (MQ=255) cgATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCa < 1:588871/251‑1 (MQ=255) gTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGAACGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGc > 1:441988/1‑251 (MQ=255) tttAAACGTCGATTGGCCCGCTCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGGGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCCCCACCGCCATGCTTGATACAGATTTGCATTAATTGATTTTGCGCGCCCAGAAAACTTCCCAGC‑TCTC‑GACCCCCTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATAc < 1:46091/250‑1 (MQ=255) cGTCGATGGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTGGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCGGGTCGCCCCAGGTTTTATCGACAACTCCCCCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATGGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATGGATCGGGGAAAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAAc < 1:505649/251‑1 (MQ=255) gATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGAtc > 2:462536/1‑251 (MQ=255) cgcgCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTAc > 2:605730/1‑250 (MQ=255) gcCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACg > 2:527144/1‑251 (MQ=255) cggCGGGAAGATTCCTTTTTCGGGTTGCTGCGCTTGCCTTGTGGCCCGGTGGTGCGTCGCACCAGGTCGCCCAAGTCTTTATCGACAACTTCCCCATCGCCATGCTTGATACAGATTTGCATAAATTGATATTGCGCGACCAGAAACCTTTCCAGC‑CCTC‑GATCCACTTTTTGTTTGATCGATCGCGGAGAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTc < 1:427977/249‑1 (MQ=255) gggaaaGATTCAATTTTCAGGTTGCTTCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTGGCCCCAGGCTTTATCGAAACCTTCACCACCGCCATGCTTGATACAGAGTTGCATTAATTGATTTTGCTCGACCAGCAAATTTCCCAGC‑TCTC‑GATCCCCTTCTTGTTGGATCGTCCGGGGAAAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGAc < 1:536821/247‑1 (MQ=255) cGGGAACATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGCTATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGAc > 2:51019/1‑251 (MQ=255) gATTCCATATCCAGGTTGCGGCGCAGGCCTTGTAGCGCCGTGGTGCGCCGCCCCGGGTCCCCCCAGGTTTTATCGACAACTTCCCCACCGCCATGCTTGATACAGAGTTGCATTAATTGATATGGCGCGACCAGCAAACTTCCCAGC‑TCTC‑GACCCACTTTTTGTTTGATCGACCGGGGAAAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCaaa < 2:518924/251‑1 (MQ=255) tCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTg > 1:36425/1‑251 (MQ=255) gtgcATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCCTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGtt > 1:454486/3‑251 (MQ=255) cATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCg > 2:25500/1‑251 (MQ=255) gTAGCGCCGTGGCGCGTCGCACCAGGTCGCCCAAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATg > 1:72756/1‑251 (MQ=255) gtgCGCCGCACCAGGTCGCCCCAGTTTTTATCGACAACTTCACCTCCGCATTTCTTAATACAGAGTTGCATTAATTGATATGGCGCCACCACCAACCTTCCCACC‑TCTC‑AATCCCCTTTTTGTTTGATCGACCGCGGAAAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAAt < 1:65672/251‑1 (MQ=255) caccggttCGCCCCGGGCTTTATCGACAACTTCCCCACCCCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTCCCAGC‑TCTC‑GATCCTCTTTTTGTTTGATCGACCGCGGAAAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAgcg < 1:232073/244‑1 (MQ=255) aGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGcc > 2:167510/1‑251 (MQ=255) tttacagACAACTTCCCCACCGCAATGCTAGATACAGGGTTGAATTAATTATTTTTGCGCGCCCAGCAATCTTCCCAGC‑TCTC‑GACCCACTTCTTGTTTGATCGATCGCGAAAAAAAGACCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGc < 2:513047/244‑1 (MQ=255) tATCGACAACTTCCCCATCGCCATGCTTGATACAGATTTGCATTAATTGATTTTGCGCGCCCACCAACCTTCCCAGC‑TCTC‑GATCCACTTCTTTTTTGATCGATCGCGGAAAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGccc < 1:43247/250‑1 (MQ=255) cgaaacctccACCATCGCTATTTTTAATACAGAGTTGCATTATTTGATTTTGCGCGACCAGAAAACTTCCCACC‑TCTC‑GCTCCCCTTCTTGTTTGATCGATCGGGGAGAAAAGACAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCAc < 1:349946/242‑1 (MQ=255) caactaccccaccGCCATGCTTAATACAGAGTTGAATTAATTGTTATTGCGCGCCCAACAAACTTCCCAGC‑ACCC‑GATCCCCTTCTTGTTTGATCGACCGCGGAAAAAAGACAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCa < 2:579971/228‑1 (MQ=255) cAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCa > 1:579971/1‑240 (MQ=255) aaCTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCAt > 1:266935/1‑251 (MQ=255) cTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGtata > 1:381022/1‑229 (MQ=255) tCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACg > 2:34814/1‑250 (MQ=255) cccaccgcctttcTTGATACGGAGTTTCATTAATTGAATTTGCGCGACCAGCAAACTTCCCA‑C‑TCCCCTTTCCACTTCTTTTTTAATCGACCGCGGAGAAAAAAGAAATTCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGt < 1:126/239‑1 (MQ=255) aTCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGGTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGtttt > 1:330176/1‑251 (MQ=255) gCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCt > 1:610206/1‑250 (MQ=255) gCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCt > 2:148148/1‑250 (MQ=255) ttGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATcac > 1:111406/1‑194 (MQ=255) ttGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTAc > 1:166037/1‑251 (MQ=255) tGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAA‑TTTCCCGCCTCTC‑GATCCCCTTCTGGTTTGATCGACCGCGGAAAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGt < 1:105469/248‑1 (MQ=255) aCAGAGTTGCATTAATTGATATGGCGCGACCAGCAAACTTCCCAGC‑TCTC‑GATCCCCTTCTTGTTTGATCGATCGCGGAGAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCg < 1:167510/251‑1 (MQ=255) ggttgtctttatgttatatgccgagACCAGCAAATTTTCCAGC‑TCCC‑GACCCACTTTTTGTTTAGTCGGTCGGGGAAAAAAGAGAAATTCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAgg < 2:529457/227‑1 (MQ=255) gTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGcc > 2:111791/1‑213 (MQ=255) gTTGCATTAATTGATATTGCGCGACCAACAAACTTTCCAGC‑TCTC‑GACCCCCTTCTTTTTTGATCGATCGCGGAAAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGcc < 1:111791/213‑1 (MQ=255) cATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATcc > 1:290793/1‑251 (MQ=255) ntatTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACaa > 2:280033/2‑250 (MQ=255) cgcgcGACCAAAAAACTTCCCACC‑TCCC‑GTCCCACTTCTTGTTTGTCCGCTCGCGGAAAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAAcc < 1:430071/250‑1 (MQ=255) gACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGccc > 1:225432/1‑251 (MQ=255) naGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGcccc > 2:271368/2‑190 (MQ=255) aaactttcccacctccagttCCACTTCTTTTTAGACCGATCGCGGAAAAAAGAGAAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATAc < 1:493512/232‑1 (MQ=255) tttCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGcac > 1:163426/1‑251 (MQ=255) ccacc‑tctC‑GATCCCCTTTTTGTTTGACCGATCGCGGAAAAAAGAGAAATTCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACAcc < 1:566409/247‑1 (MQ=255) tctc‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAat > 1:604577/1‑251 (MQ=255) ccACTTTTTTTTAGATCAATCGCAGAAAAAAGACAAAATCCGCCATAATCGCCCACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaat < 1:35680/251‑1 (MQ=255) ttcttGTATGAACGATCGGGGAGAAAAAAACAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaataat < 2:100112/250‑1 (MQ=255) ttttggtgcggccgcgGAAAAAAAAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTg < 2:225432/238‑1 (MQ=255) atcgctcgCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat < 1:462536/251‑1 (MQ=255) atcgatggGGGAAAAAAGACCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat < 1:562405/251‑1 (MQ=255) cagtgcggagagaAAAGAAAAATTCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGatc < 2:79373/242‑1 (MQ=255) atcgCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGACCACAATGATCAGCGCGGCATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCa > 2:112011/1‑177 (MQ=255) | TGGGTAATCAGCGTCAGCGATAGCGTATTGATCGCTTTTAAACGTCGATTGGCCCGCGCCCAGCGGGAAGATTCCATATTCAGGTTGCTGCGCATGCCTTGTAGCGCCGTGGTGCGTCGCACCAGGTCGCCCCAGGCTTTATCGACAACTTCACCATCGCCATGCTTGATACAGAGTTGCATTAATTGATATTGCGCGACCAGCAAACTTTCCAGC‑TCTC‑GATCCACTTCTTGTTTGATCGATCGCGGAGAAAAGAGCAAATCCGCCATAATCGCACACACAATACCGATAACGATCTCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATC > NC_000913/3387437‑3387925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |