| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,621,118 | 0 | A | C | 38.0% | 75.7 / 12.3 | 51 | V7G (GTG→GGG) | eamA | cysteine/O‑acetylserine exporter EamA |
| Reads supporting (aligned to +/- strand): ref base A (21/10); new base C (0/19); total (21/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.40e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGGACAGACAAATGAACTTATCCCTACGACGCTCTACCAGCGCC > NC_000913/1620875‑1621364 | aGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATc > 1:8798/1‑251 (MQ=255) ccAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCtt < 1:575665/250‑1 (MQ=255) cagGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTcgc > 1:62383/1‑251 (MQ=255) tACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCAGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACAtt > 1:20895/1‑251 (MQ=255) aGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGTGACATTCTACCg < 1:436315/251‑1 (MQ=255) gCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCAAGCAGCAAATGCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGaa < 1:38812/251‑1 (MQ=255) caAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAAttt > 2:191557/1‑251 (MQ=255) aaaagaaaagCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCAt > 2:605366/1‑251 (MQ=255) aaagaaaagCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATc > 1:379541/1‑251 (MQ=255) aaaagCAAACTGCGCAAAAATGATGTTTAATCCATACCTCAGCAGCAAATTCAGTGGAACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATCATGCCCC‑ACTTTGATGACCACAACATTTAGCCCCCATACGACCACTCCCAGTCGCGCCAACACCCCATCTTTTCCCGACACTCTACCTCCTCTGAATTTCATCtttt > 2:332719/1‑251 (MQ=255) aagaaaaCGGCGAAAAACTGATGGTTAATCCATACCCCAGCAGCAATTTCAGTGGTACTTGCGGTCGTGCGAAAAAAAAGAAAGCCGGAAAAGCGACCAGCAAAAAGCGCAAACC‑GGCCA‑GCATCAGCGGGGGCATGTTATAAAGCCCC‑ACTTTGATGACCAAAAAATTTAGCCCCCAGACGACCACTACCAGGAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGt < 1:492680/247‑1 (MQ=255) gcgcAAAACTGATGGTTAATCCATACCCCAGCAGAAAATTCAGTGGTACTTCCGGTCGTGCGAAAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCAATACGACCACTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAAt < 1:266896/249‑1 (MQ=255) actagttgttattccaccccccAGCAGCAAATTCAGTGTTCCTTCCGCTCGGGCAAAAAAAAAGATAGCGGAAAAAGGCACCAGAATAAAGCGAAACCC‑GGCCG‑GCATCAGCGGTGGCTTTTTAGGAGCCCCC‑ACTTTTACGCCCACAAAATTTACCCCCCATACACCCACTCCCGGGAGCGCCAACCCCCCATCTTTCCGCAACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGc < 2:66678/233‑1 (MQ=255) aTGGTTAATCCATCCCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATCCGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGaa < 1:605366/251‑1 (MQ=255) aTGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTACCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCACCTTAGCTGa > 1:161702/1‑250 (MQ=255) aaccactACCCCACCAGCAAATGCAGGGGTACTGTCGGTCGTGACACAAAAAAGATAGCCGGAAAAGCCCCCAGCAAAAAGC‑CAAACCCGCCCA‑GCTTCAGCGTGGGCATTTTATGATTCCCC‑ACTTTGATGCCCACAAAATTTACCCCCCATACGACCCCCCCCAGTAGCTCCAACACCCCATTTTTCCGCGACATCTTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAc < 2:520998/244‑1 (MQ=255) aaccaaTACCCCAGCAGCAAATCCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAACCC‑GGCCA‑GCATCAGCGGTGGCATTTTATGAACCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAc < 1:386410/245‑1 (MQ=255) ccAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAAc > 1:391335/1‑251 (MQ=255) ccAGCAGCAAAGTCAGTGTTACTTTCGGTCGTGCAAAAAAAAAGATACCCGGAAAAGAGCCCAACATAAAGCGCAACCC‑GGCCA‑GCATCAGCGGTGGAATGTTATAAAGCCCC‑TCTTTGATGCCCAAAAAATTGCGCCCCCATACGACCACTACCATTAGCCCCAACTCCCCATCTTTTCGCCACGTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAAc < 2:108906/251‑1 (MQ=255) agcagcAAATTCAGTGGTCCTTCCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAg < 1:191557/251‑1 (MQ=255) cagaaaaTTCAGTGTTCCTTCCGGTCGGGCGAAAAAAAAAAGAGCCGGAAAAGCGACCAGCATAAGGCGCAACCC‑GGCCC‑GCATCAGCGGTGGCATGTTAGAAAGCCCC‑ACTTTGATGCCCAAAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCTTCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGtt < 2:462068/247‑1 (MQ=255) aagcaAATACAGTGGTCCTTACGGGCGTGCGAAAAAAAAACAAGCCGGAAAAGCGACGAGCAAAAAGCCCAAACC‑GCCCA‑GCATCAGCGGTGGCTTTTTATGACGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCCCTACCTGTAGCGCCACCCCCCCATTTTTCCCCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGtt < 2:173098/250‑1 (MQ=255) atttaaGTGGTACTTTCGGTCGTGCAAAAAAAAATATAGCGGGAAACCGGCCCAGCATAAAGCGCAACCC‑GCCCA‑TATTCAGCGGTGGCATGTTATGAACCCCC‑CCTTTGATGACCAAAAAATTTACCCCCCATCCCCCCCCTACCAGTAGCGCCACCCCCCCTTTTTTCCGTGAATTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTc < 2:245484/246‑1 (MQ=255) aaTTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCtt < 2:354424/168‑1 (MQ=255) aaTTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCtt > 1:354424/1‑168 (MQ=255) aCTTTCGGTCGTGCGAAAAAAAAGATAGCCGGAAAAGCACCCACAATAAAGCGCAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGCCCAAAAAATTTACCCCCCATACGCCCACTACCAGTAGCCCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCg < 1:14608/251‑1 (MQ=255) ttCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCAAAAAGCGAAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCAAAAAATTTAGCCCCCATCCGACCACTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGt < 1:590934/250‑1 (MQ=255) cGGTCGGGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCAAAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATTTTATGAACCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTac < 1:386552/251‑1 (MQ=255) gTCGTGCAACAAAAAAGAGAGCCGGAAAAGCGACCAGCATAAAGCGAAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTAATGCCCAAAAAATTTAGCCCCCATACGACCCCTACCGGGAGCGCCAACCCCCCATCTTTCCGCGCCATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacga < 1:153046/251‑1 (MQ=255) aaaGATAGCCAAAAAAGCGACAACCAAAAGGCGCAA‑CC‑GGCCAAGCATCAGCGGTGGCATTTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTACCCCCCATCCGACCACTCCCAGGAGCGCCAACCCCCCATCTTTGCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATgcg < 2:20895/251‑1 (MQ=255) aGATGGCCGGAAAAGCGCCCAAAAAAAAGCGCAACCC‑GGCAA‑GAACCAGGGGTGGCATGTTTGGAAGCCCC‑CTTTTGATGACCACAAAATTTAGCCCCCATCCGACCACTACCAGTAGCCCCAACCCCCCATCTTTCCGCAACATCATCCCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCa < 2:306580/251‑1 (MQ=255) ggAAAAGCGACAAGCAAAAAGCGAAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTACGAAGCCCC‑ACTTTGAGCACCACAAAATTTAGCCCCCATACGCCCACTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTc < 2:432442/251‑1 (MQ=255) aaaGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCt > 2:221132/1‑251 (MQ=255) ccAGCAAAAGGCGCAACCC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ATTTTGATCACCACAAAATTTACCCCCCATCCGCCCACTCCCAGTAGCGCCAACCCCCCATCTTTCCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGGCGGCATTAATGCGCAAATAAGTCGCTATACTTc < 2:8798/251‑1 (MQ=255) c‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGtt > 2:231756/1‑196 (MQ=255) c‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGtt < 1:231756/196‑1 (MQ=255) ca‑gcagcagGGGGGGCATGTTAGGACGCCCC‑ACTTTGAAGACCAAAAAATTTAGCCCCCAAACGACCCCCCCCAGTAGCGCCACCCCCCCATCTTTCCTCACCATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCt < 2:493199/251‑1 (MQ=255) cacaaTCAGCGTTGGCATGTTA‑GAACCCCCCTCTTGGAGAACCACAAAATTTCCCCCCCATCCGACCACTACCAGTGTCGCCAACACCCCATTTTTTCGCCACATTCTCCCGCCTCTGAATTTCATCTTTTGTAAGCAAGCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCt < 2:179260/247‑1 (MQ=255) gCATCAGCGGTGGCATTTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTACCCCCCATCCGACCACCACCAGTAGCGCCAACCCCCCATCTTTTCGCAACATCCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCttt < 1:47578/251‑1 (MQ=255) gCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCttt > 1:169815/1‑251 (MQ=255) gCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCttt > 2:237957/1‑251 (MQ=255) ataagtggTGGCATTTTATGACACCCC‑CTTTTGATGACCAAAAATTTTAGCCCCCATACGCCCACTCCCAGTAGCCCCAACACCCCATTTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTAc < 2:39545/245‑1 (MQ=255) cATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTaaaac > 1:401002/1‑251 (MQ=255) aTGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTaaaac > 1:454493/1‑250 (MQ=255) aTGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTACCAGTTGATTCGTTAGTCGCCGGTTACGACTGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTaaaacaaaac > 2:244836/1‑250 (MQ=255) c‑ACTTTGAAGACCAAAAAATTTATCCCCCATCCCCCCACTCCCAGTAGCGCCAACCCCCCTTCTTTTCTCAACATTCAACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAAc < 2:355633/251‑1 (MQ=255) acaAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCACCACCCCATCTTTTCGCGACATTCTACAGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGgac > 1:537730/1‑250 (MQ=255) aGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGGACAGACAAATg > 2:451326/1‑250 (MQ=255) ccATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGGACAGACAAATGAACtt > 1:7482/1‑250 (MQ=255) cgccccctcccAGTAGCCCCACCCCCCCATTTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGGACAGACAAATGAACTTATCCCt < 2:391335/242‑1 (MQ=255) cAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTACGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGCTTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGCAACGCACTGCCGGACAGACAAATGAACTTATCCCTACGACGCTCTACCAGCGcc > 1:334728/1‑251 (MQ=255) | AGTCCAGCAGGCATACCGAAGTTAATGGCACAAAAAAGAAAAGCAAACTGCGCAAAACTGATGGTTAATCCATACCCCAGCAGCAAATTCAGTGGTACTTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACC‑GGCCA‑GCATCAGCGGTGGCATGTTATGAAGCCCC‑ACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGATTTTTGCCATGCTATTTCTTTACATCTCTAAAACAAAACATAACGAAACGCACTGCCGGACAGACAAATGAACTTATCCCTACGACGCTCTACCAGCGCC > NC_000913/1620875‑1621364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |