| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,379,638 | 0 | G | A | 28.3% | 85.1 / 13.9 | 46 | F45F (TTC→TTT) | frdC | fumarate reductase membrane protein FrdC |
| Reads supporting (aligned to +/- strand): ref base G (29/4); new base A (0/13); total (29/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGCAACAAACAGGATTACGATGGTGGCAACCACAGTTACCGCCCAGAGACTTTTGATAATTGGCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCGACGTGTTTCGGGCAGACTT > NC_000913/4379389‑4379880 | ggCAACAAACAGGATTACGATGGTGGCAACCACAGTTACCGCCCAGAGACTTTTGATAATTGGCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTATGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCg > 1:575420/1‑250 (MQ=255) aaacaGGATTACGATGGTGGCAACCACAGTTACCGCCCAGAGACTTTTGATAATTGGCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATc > 2:137934/1‑250 (MQ=255) tACGATGGTGGCAACCACAGTTACCGCCCAGAGACTTTTGATAATTGGCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGc > 1:86714/1‑251 (MQ=255) ggCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTaaa > 2:563853/1‑250 (MQ=255) ggTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGc > 1:392051/1‑247 (MQ=255) tCCCATTTTTTCGTCTTTTACGATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGGTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATTATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATaa > 1:78328/1‑250 (MQ=255) cATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACg > 1:445882/1‑251 (MQ=255) tCTTTTACATGGATTTTGGCCGTTTCCGGTGCCAGTTAAACCCGGGTTTGGGTGGGAAGCAGGGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATACCCGGTTTTT‑TAAAAAAGTCGACGAACCCCGCCCAGCCTCCGGGGCCTTTTTT‑C‑AGGGCAAAC‑AGCCCAAAAATCA‑GTTAAA‑TGCTAACCCACACAGCCGAAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAAttt < 1:137934/248‑1 (MQ=255) aaTGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAgg > 1:581351/1‑251 (MQ=255) atatTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTgg > 2:341746/1‑250 (MQ=255) atatTGGCCGCTTTCGGTGCCAGTTCAAACCAGGCTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGCAAAAGCGATAAAACGGCAATTTTTTccacccggggg > 2:576188/1‑244 (MQ=255) ttCGGTGCCAGTTCAACCCAGGTTTGGGTGGGCGGAAGAGCGGCCGCCAGAGGTATCAGGTTAAGGAACAAGATAACCGGTTTTT‑TAAAAAAGTCGAAAAACCCCCCCCAGGCT‑CCGGGCCATTTTTTC‑AGGGCAAAC‑CGCCAAAAAACCA‑TTTCAA‑TGCGGACCCACACAGCCGAAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTgg < 1:99174/248‑1 (MQ=255) cGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGt > 1:595920/1‑250 (MQ=255) ggTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTAc > 2:460688/1‑251 (MQ=255) ttaaacccggtttttGGTGGGCAGCAGGGCGGCCGCAGGAGTGATCAGTTTAATGATCACAATAACCGGGTTTT‑GAAAAAAGTCGACGAATCCCCCCCAGGCTCCGGGGCCTTTTTT‑C‑AGGGAAAAC‑AGCCAGAAAATCA‑GTTAAA‑TGCTGACCCACACGGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGt < 1:460688/239‑1 (MQ=255) gTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGGTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAgt > 2:399789/1‑251 (MQ=255) gtgCAGCAGGGCGGCCGCAGGAGTGACCAGTTTAATGACCGCAATACCGGGGTTTT‑GAAAAAAGTCGACAAACCCCCCCCAGGCTTCGGGCCCTTTTTT‑C‑AGG‑CAAACCAGCCCAAAAATCA‑GTAAAA‑TGCGAAACCACCCACCGGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGt < 2:591352/251‑1 (MQ=255) aaggggcggacgccAGAGTGATAGGGTTAATAATCAAGATA‑CCGGGTTTTTGAAAAAAGCCGACGACCCCCGCCCAGGCTTCCGGGC‑ATTTTT‑CCAGGACAAAC‑AGCCCAAAAATCA‑GTTAAA‑TTCTGACCCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCAc < 2:293265/241‑1 (MQ=255) agagCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTc > 2:546470/1‑251 (MQ=255) gccAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTg > 1:381529/1‑251 (MQ=255) tGATCGGGTTAATGATCCCGATA‑CCGGGTTTTTGAAAAAAGTCGACGAACCCCCCCCAGGCTTCCGGGCTTTTTTC‑C‑AGGACAAAC‑GCCCCAAAAATCA‑GTTCAA‑TGCTGACCCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATa < 1:208858/160‑1 (MQ=255) tGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATa > 2:208858/1‑160 (MQ=255) gATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAgg > 1:115123/1‑251 (MQ=255) gATCAGGATAATGATCACGATCACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAgg > 1:464423/1‑251 (MQ=255) aGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTcg > 1:523618/1‑251 (MQ=255) gtttaagaacacagATACCCGGGTTTT‑AAAAAAAGGCGACGAACCCCCCACAGTCTTCCGGGCTATTTTC‑C‑AGGGCAACC‑ACCCCGAAACTCA‑GTTAAA‑TGCTGACCCACACAGCCGAAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTcgc < 2:136900/238‑1 (MQ=255) aTGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATa > 2:172058/1‑250 (MQ=255) cACGATACCCGGGTTTT‑GAAAAAAGTCGACGAACCCCGCCCAGGCTTCCGGGCCTTTTTT‑C‑AGGGAAAAC‑AGCCCAAAAATCA‑GTTCAA‑TGCGGACCCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGttt < 1:34442/232‑1 (MQ=255) cACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGttt > 2:34442/1‑232 (MQ=255) cGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTc > 1:234987/1‑251 (MQ=255) agATACCCGGTTTTT‑GAAAAAAGTCGACGACCCCCCCCCAGGCTCCCGGGCCTTTTTC‑C‑AGGCCACAC‑ACCCAGAAAATCA‑GTTCAT‑TCATGACCCACCCAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTc < 2:395478/250‑1 (MQ=255) aTAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCtt > 2:592140/1‑251 (MQ=255) aCCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCg > 2:224325/1‑251 (MQ=255) ggttttt‑ATAAAAAGTCGACAACCCCCGCCCAGGCTCCCGGGCCTTTTTA‑C‑GGGACAAAC‑ACCCCAAAAATCA‑GTCAAA‑TGCTAACCCACACAGCGGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAAc < 1:245831/248‑1 (MQ=255) aaaatgcgcaaacccccgccc‑gGGTTCCGGGGCTTTTTT‑C‑AGGGACAAC‑AACCCAAAAAACAAGTTAAA‑TGCTAAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACttt < 2:445882/237‑1 (MQ=255) aaaaGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACttt > 2:504124/1‑251 (MQ=255) ccgaggacccccgcccgGGCTTCCGGGCCATTTTG‑C‑AGGGCAAAC‑AGCCCAAAAATAA‑GTTCAA‑TGCGGACCCCCACGGCGGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCct < 1:231016/242‑1 (MQ=255) ccaacgaACCCCGCCAGGGCTGCCGGGCCATTTTT‑C‑GGGGCAAAA‑CCCCCAAAAATAA‑GTTAAA‑TGCTAACCCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCct < 2:500802/248‑1 (MQ=255) acgaATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GCTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCctgct > 2:134145/1‑251 (MQ=255) ccgggCTTCGGGGCCATTTTT‑C‑AGGGAAAAC‑AGCCCAAAAATCA‑GTTCAA‑TGCTGACCCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTc < 1:365829/197‑1 (MQ=255) ccAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTc > 2:365829/1‑200 (MQ=255) ccggggcttttttt‑C‑GGGGCAAAC‑AGCCCAAAAATAA‑TTTCAA‑GGCAGAACCCCCCGGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGAt < 1:305871/242‑1 (MQ=255) ggggcttttttt‑C‑AGGGCAAAC‑AGCCCAAAAATCA‑GTTAAA‑TGCTGAACCACACAGCGGAAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCg < 1:341746/244‑1 (MQ=255) cGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCg > 1:438213/1‑251 (MQ=255) gCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCGACg > 1:591772/1‑251 (MQ=255) t‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCGACGTGTTTCgg > 1:482236/1‑251 (MQ=255) acc‑AGCCCGAAAATCA‑‑TTCAAATGCTGACCCACCCAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCGACGTGTTTCGGGCAGACtt < 1:290411/249‑1 (MQ=255) | GGCAACAAACAGGATTACGATGGTGGCAACCACAGTTACCGCCCAGAGACTTTTGATAATTGGCTCTGGTCCCATTTTTTCGTCTTTTACAATGATATTGGCCGCTTTCGGTGCCAGTTCAAACCAGGTTTTGGTGTGCAGCAGAGCTGCCGCCAGAGTGATCAGGTTAATGATCACGATAACCGGGTTTT‑GTAAAAAGTCGACGAATCCCGCCCAGGCTTCCGGGCCATTTTT‑C‑AGGGCAAAC‑AGCCCGAAAATCA‑GTTCAA‑TGCTGAACCACACAGCCGGAACCGCCGTGCCTTCGCGCAGCATGTAAAAGCGATAAAACGGCAATTTTTTCCACCAGGTGGACGTCATTGGCCGTACATACGGTTTACGTTTAGTCGTCATGTTGCACTCCTTAGCGTGGTTTCAGGGTCGCGATAAGAAAGTCTTTCGAACTTTCTACTTTGCCCTGCTGAATGGCCGCAGCCGGATCGACGTGTTTCGGGCAGACTT > NC_000913/4379389‑4379880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |