Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT34.4% 30.3 / 11.0 32intergenic (‑179/‑28)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (2/19);  new base T (10/1);  total (12/20)
Fisher's exact test for biased strand distribution p-value = 1.03e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AAAACTCCCGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAG  >  NC_000913/3206188‑3206678
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                            
aaaaCTCCCGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCa                                                                                                                                                                                                                                                            <  2:324454/250‑1 (MQ=255)
      cccGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAATT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTCATA‑Caaa                                                                                                                                                                                                                                                     >  1:296949/1‑250 (MQ=255)
      cccGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑Caa                                                                                                                                                                                                                                                      <  2:531241/249‑1 (MQ=255)
                          ccAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCa‑t                                                                                                                                                                                                                             <  1:467922/251‑1 (MQ=255)
                             gTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTTAAA‑CAAAAACA‑AAAAATGGAggttgcatgat                                                                                                                                                                                                                            >  2:496438/1‑241 (MQ=255)
                                                          cTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAAGTTTTTCC‑GA‑CAAAAACA‑AAAAATTGAGGTG‑CCT‑CGATT‑AGCGAAAGTAAT‑AAACAAAAGG‑ccatgg                                                                                                                                                                                          >  1:12368/1‑246 (MQ=255)
                                                                                   aGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTCACA‑CAAATACA‑AAAAATGGAGGTG‑CCA‑TTATG‑AGCGAAAGGAAT‑AAACAAAAAG‑CAGTGAATAAGATGA‑AAGAGATTGTTGCTa                                                                                                                                                                 >  1:51614/1‑250 (MQ=255)
                                                                                    gTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTAAc                                                                                                                                                               <  1:496438/251‑1 (MQ=255)
                                                                                                                      gCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑AAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTAAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgat                                                                                                                              <  1:162924/250‑1 (MQ=255)
                                                                                                                           ccccTGCTTTGGCGCAAAATGCATTTTTATTTTCGCGTTAATTCACGAACTGTTAATTACAAATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑AAAAAAAA‑AAACCTGGGGTGG‑CCA‑GGATG‑GGCGAAAGAAAA‑AAGAAACGGG‑CAGTGAAGAAGTGAA‑AAGATTTTGTCCCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                                                                                                                         <  2:492209/249‑1 (MQ=255)
                                                                                                                                gCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTCAAA‑CAAAAACA‑AAAAATGGAGGTG‑CCA‑TGATG‑AGCGAAAGAAAT‑AAACAAAAGA‑CAGTGAATAAGTTGA‑CAGAAATTGTCGCTAAATTTAACGCCCTGATTTTTACACCAATGCCTGATGACgtgggggg                                                                                                                   >  1:534369/1‑247 (MQ=255)
                                                                                                                                gCTCTGGCGCAATATTCATTCTTATTTTCGAGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑ATTTTTCAAA‑CAAATACA‑AAAAATGGAGTTGGCCA‑T‑ATT‑AGGGGAAGGAAA‑AAACAAAAAG‑CAGAGAAAAAAGTGA‑AAGAGAATGTAGCTAACTTTACCGCCCAGCTTTTTACCCGAAAGCCTTGTGACgtgggggg                                                                                                                   >  1:193701/1‑247 (MQ=255)
                                                                                                                                      gcgaaaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAACCCCCATTTTTATTGG‑TAGTTTGTGGCGGTGAT‑TTTTTCCAGA‑CAAATACA‑AAAACGGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑t                                                                                                            <  1:608363/247‑1 (MQ=255)
                                                                                                                                       cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTCCGA‑CAAATAAA‑AAAACTGGGGTTG‑CCA‑TGATG‑AGCGAAAGGAAT‑AAACAAAAGG‑CAGTGGATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGCAAGCCTGATGACgtgggggggaaact                                                                                                             >  1:93719/1‑240 (MQ=255)
                                                                                                                                          aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAACCCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCAAAAGTAAA‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGc                                                                                                                                   <  1:543058/225‑1 (MQ=255)
                                                                                                                                             attcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑ATTTTTTAGA‑CAAATAAA‑AAAAATGGAGTTG‑CCA‑TGATT‑AGCGAAAGTAAT‑AAACAAAAAG‑AAGTGAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCCCCATGATTTTTACCCCAATGCCTGATGAGGGGGTGGATAAAC‑TTAAACa                                                                                                      >  2:13947/1‑250 (MQ=255)
                                                                                                                                                      tATTTTCGCGTTAATTCACGATCTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATAAA‑AAAAATTGAGGTT‑CCA‑TTATG‑AGCGAAAGTAAT‑AAAAAACAGG‑CAGGGAATAAATTGA‑TAGAGAATTTCGCTAACCTTACCCCCCTGATTTTTAACCGAATGCGTGCTGACGGGGGGGGTAAAC‑TAAAAAAGCTAAAgg                                                                                              >  1:425625/1‑249 (MQ=255)
                                                                                                                                                       aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTTCAGA‑CAAATAAA‑AAAAATTGAGTTG‑CCA‑TGATG‑GGCGAAAAGAAA‑AAGAAAAAAG‑GAGGGAATAAATTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTTTACCCGAATGACCGGTGACGGGGGGGGTAAAA‑TAAAACAGCTAAAGGATg                                                                                           >  1:92567/1‑251 (MQ=255)
                                                                                                                                                          ttCGCGTTGATTCAAGAACTTTTAATTACTTATTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGT‑TATTTTGTGGGGGT‑AA‑TTTTTTCA‑A‑CAAAAAAACAAAACCGGAATTT‑GCA‑AGATGGAG‑GAAAATAATTAAGAAACCGG‑CAGTGAATATGTTAA‑CGAAGTTTGTCGCTAGTTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGcc                                                                                         <  2:86867/250‑1 (MQ=255)
                                                                                                                                                              cgTTAATTCACGACCTTTAAATTACATTTTCACGGTGGCAAAAAAT‑ATAAACCCACATTTTTAGTGG‑TAGTTTGTGGGGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAGGTAAT‑AAGCAACAGG‑CAGGGAATAAGTTGA‑CAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAAc                                                                                    <  1:419716/251‑1 (MQ=255)
                                                                                                                                                              cattGATTCACGAACTTTTAATTACATATTCACGGGGGAAAAAAAT‑AAAAAACCACATTTTTAGTGG‑TAGTTTGGGGGGGGGAA‑TTTTCCCAAA‑CAAAAAAA‑AAAACTGGAGTGG‑CCA‑TGATG‑AGGGAAATTAAA‑AAGCAACAGG‑AAGTAAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAAc                                                                                    <  2:51614/249‑1 (MQ=255)
                                                                                                                                                                  gATTCACGAACTGTTATTTACATATTCAGGGTGGAAAAAAAT‑ATAAAACCACATTTTAAGTGT‑TAGTTTGTGGGGGTGAA‑TTTTTCAAGA‑CAAATACA‑AAAACGGGAGTTG‑CCA‑TAATG‑AGCGAAAGTAAT‑AAGAAACAGG‑CAGTAAATAAGTGGA‑AAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAAcgtc                                                                                 <  1:308465/250‑1 (MQ=255)
                                                                                                                                                                   aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑ATTTTTCAGAACAAA‑ACA‑AAAACTTGAGGTG‑CCACTG‑TG‑AGGGGAAGTAAA‑AAACAAAAAG‑CGGTGGATAAGTTGA‑CAGAGATTGGCGCTAAATTTTACGCCATGAATTCTAACCGAAAGCCTGATGACGGGGGGGGTAAAC‑TAAAAAAACAAAAAGAAGCCGAAAcatcgg                                                                               >  1:89849/1‑250 (MQ=255)
                                                                                                                                                                          aaCTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑ATTTTTCAGA‑AAAATAAA‑AAAAATGGAGTTG‑CCC‑TGGTG‑AGCGGAAGGAAT‑AAGCAAAAAG‑AAGGGAATAAATTTA‑CAGAGATTTTCGCTAAATTTATCCCCCTGATTTTTAACCCAAAGGCTGCTGACGGGGGGGGTAAACATAAAA‑AACTAAAGGATGGCGAAAcggcggcggtggg                                                                        >  1:437020/1‑240 (MQ=255)
                                                                                                                                                                                            tccgtgggCAAAAAATGATAGAACAACATTTTTAGTGG‑TATTTTGTGGCGGTGAT‑TTTTTCAAGA‑AAAAAACA‑AAAACGGGTGTTG‑CAA‑TGATG‑AGCAAAAGTAAA‑AAGCAACAGG‑CAGTTAATAA‑TTGAACAGAGATTGTCGCTAACTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGTGAAAATTATCTACCag                                                        <  2:511013/244‑2 (MQ=255)
                                                                                                                                                                                               ggTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGAt                                                   <  1:13947/251‑1 (MQ=255)
                                                                                                                                                                                                             ataAAACCACATTTTT‑GTGGGTAGTTTGTGGCGGTGAA‑TTTTCCCAGA‑CAAATAAA‑AAGACTGGAGTTG‑CAA‑TGATG‑AGCGAAAGTAAA‑AAGCA‑CAGGGAAGTGAATAAGTTGA‑CAGAGATTGTCGCTATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATg                                      <  2:506328/251‑1 (MQ=255)
                                                                                                                                                                                                                   ccACATTTTAAGTGG‑TAGTTTGTGGTGGTAAA‑TTTTGCGAAA‑AAAATAAA‑AAACCGGGAGTGG‑ACA‑TGAAG‑AGAGAAAGTAAT‑AAACAACAGA‑CAGTGATTATGTTGC‑CAGAGATTGTCCCAAATTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACAAGCaaaaa                                <  2:74524/251‑1 (MQ=255)
                                                                                                                                                                                                                             aGTGG‑TATTTTGGGGCGGTGAA‑TTTTTCCAGA‑CAAATAAA‑AAAACTGGAGTTG‑CCA‑TGATG‑GGGAAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGGGTTGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAcc                      <  1:368071/251‑1 (MQ=255)
                                                                                                                                                                                                                                    aGTTTGGGGGGGTGAA‑TTTTCCCAGA‑AAAATAAA‑AAAAGTGGAGTTG‑CAA‑TGAGG‑AGCAAAATAAAA‑AAACAACAGG‑CAGGAAATAAGGTGA‑CAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAAt                 <  2:122769/250‑1 (MQ=255)
                                                                                                                                                                                                                                     gTTTGTGGCGGTGAA‑TTTTTCCAGA‑AAAAAACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCAAAAGTAAT‑AAGCAACAGG‑CAGGGAATAAGTTTA‑CAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg               <  1:261537/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   attttttCCAGA‑AAAATAAA‑AAAACTGGGGTTG‑CCA‑TGATG‑GGCAAAATTAAT‑AAGCAAAAGG‑CAGTGAATAATTTGA‑CAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAg  <  1:416700/249‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                            
AAAACTCCCGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGG‑TAGTTTGTGGCGGTGAA‑TTTTTCCAGA‑CAAATACA‑AAAACTGGAGTTG‑CCA‑TGATG‑AGCGAAAGTAAT‑AAGCAACAGG‑CAGTGAATAAGTTGA‑CAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAC‑TAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAG  >  NC_000913/3206188‑3206678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑